RNA–Protein interactions for RNA: ENST00000600320.5

SHKBP1-222, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 913 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-222ENST00000600320 TEX13AQ9BXU3 409 aaPredicted RBP25.89■■□□□ 1.74
SHKBP1-222ENST00000600320 ANO8Q9HCE9 1232 aaPredicted RBP25.89■■□□□ 1.74
SHKBP1-222ENST00000600320 MYH14Q7Z406 1995 aaKnown RBP25.88■■□□□ 1.73
SHKBP1-222ENST00000600320 HOXB7P09629 217 aa25.88■■□□□ 1.73
SHKBP1-222ENST00000600320 EIF2S2P20042 333 aaKnown RBP25.88■■□□□ 1.73
SHKBP1-222ENST00000600320 CRKLP46109 303 aaKnown RBP25.88■■□□□ 1.73
SHKBP1-222ENST00000600320 ZNF827Q17R98 1081 aa25.88■■□□□ 1.73
SHKBP1-222ENST00000600320 INTS5Q6P9B9 1019 aaKnown RBP25.88■■□□□ 1.73
SHKBP1-222ENST00000600320 CNTNAP4Q9C0A0 1308 aa25.88■■□□□ 1.73
SHKBP1-222ENST00000600320 VAMP4O75379 141 aa25.87■■□□□ 1.73
SHKBP1-222ENST00000600320 A1BGP04217 495 aa25.87■■□□□ 1.73
SHKBP1-222ENST00000600320 NECTIN2Q92692 538 aa25.87■■□□□ 1.73
SHKBP1-222ENST00000600320 STARD3NLO95772 234 aa25.86■■□□□ 1.73
SHKBP1-222ENST00000600320 PIP4K2AP48426 406 aaPredicted RBP25.86■■□□□ 1.73
SHKBP1-222ENST00000600320 AKT1S1Q96B36 256 aa25.86■■□□□ 1.73
SHKBP1-222ENST00000600320 CCDC87Q9NVE4 849 aa25.85■■□□□ 1.73
SHKBP1-222ENST00000600320 ZBTB1Q9Y2K1 713 aa25.85■■□□□ 1.73
SHKBP1-222ENST00000600320 NBPF26B4DH59 902 aa25.84■■□□□ 1.73
SHKBP1-222ENST00000600320 RC3H1Q5TC82 1133 aaKnown RBP25.84■■□□□ 1.73
SHKBP1-222ENST00000600320 HDGFL1Q5TGJ6 251 aa25.84■■□□□ 1.73
SHKBP1-222ENST00000600320 NBPF14Q5TI25 921 aa25.84■■□□□ 1.73
SHKBP1-222ENST00000600320 NBPF10Q6P3W6 841 aaKnown RBP25.84■■□□□ 1.73
SHKBP1-222ENST00000600320 SMIM5Q71RC9 77 aa25.84■■□□□ 1.73
SHKBP1-222ENST00000600320 AMIGO3Q86WK7 504 aa25.84■■□□□ 1.73
SHKBP1-222ENST00000600320 NBPF15Q8N660 670 aa25.84■■□□□ 1.73
SHKBP1-222ENST00000600320 SOS1Q07889 1333 aaPredicted RBP25.84■■□□□ 1.73
SHKBP1-222ENST00000600320 TCERG1O14776 1098 aaKnown RBP25.82■■□□□ 1.72
SHKBP1-222ENST00000600320 CANXP27824 592 aaKnown RBP25.82■■□□□ 1.72
SHKBP1-222ENST00000600320 AK7Q96M32 723 aa25.82■■□□□ 1.72
SHKBP1-222ENST00000600320 GNPATO15228 680 aa25.81■■□□□ 1.72
SHKBP1-222ENST00000600320 PDIA6Q15084 440 aa25.81■■□□□ 1.72
SHKBP1-222ENST00000600320 TUBGCP6Q96RT7 1819 aa25.8■■□□□ 1.72
SHKBP1-222ENST00000600320 ANXA1P04083 346 aa25.8■■□□□ 1.72
SHKBP1-222ENST00000600320 SLC15A2Q16348 729 aa25.8■■□□□ 1.72
SHKBP1-222ENST00000600320 PROSER3Q2NL68 480 aa25.8■■□□□ 1.72
SHKBP1-222ENST00000600320 STK32BQ9NY57 414 aa25.8■■□□□ 1.72
SHKBP1-222ENST00000600320 UBR3Q6ZT12 1888 aa25.79■■□□□ 1.72
SHKBP1-222ENST00000600320 RPS6KA4O75676 772 aa25.79■■□□□ 1.72
SHKBP1-222ENST00000600320 CHPF2Q9P2E5 772 aa25.79■■□□□ 1.72
SHKBP1-222ENST00000600320 ERBB4Q15303 1308 aa25.79■■□□□ 1.72
SHKBP1-222ENST00000600320 HMGB2P26583 209 aaKnown RBP25.78■■□□□ 1.72
SHKBP1-222ENST00000600320 MYL6BP14649 208 aa25.77■■□□□ 1.72
SHKBP1-222ENST00000600320 CCDC30Q5VVM6 783 aa25.77■■□□□ 1.72
SHKBP1-222ENST00000600320 LRP10Q7Z4F1 713 aa25.77■■□□□ 1.72
SHKBP1-222ENST00000600320 EIF5P55010 431 aaKnown RBP25.76■■□□□ 1.71
SHKBP1-222ENST00000600320 DDX21Q9NR30 783 aaKnown RBP eCLIP25.76■■□□□ 1.71
SHKBP1-222ENST00000600320 TFCP2L1Q9NZI6 479 aa25.76■■□□□ 1.71
SHKBP1-222ENST00000600320 RTCBQ9Y3I0 505 aaKnown RBP25.76■■□□□ 1.71
SHKBP1-222ENST00000600320 PHF14O94880 888 aa25.75■■□□□ 1.71
SHKBP1-222ENST00000600320 IL6STP40189 918 aaPredicted RBP25.75■■□□□ 1.71
SHKBP1-222ENST00000600320 PNPLA7Q6ZV29 1317 aa25.74■■□□□ 1.71
SHKBP1-222ENST00000600320 CT47B1P0C2W7 299 aaPredicted RBP25.74■■□□□ 1.71
SHKBP1-222ENST00000600320 DBF4Q9UBU7 674 aaPredicted RBP25.74■■□□□ 1.71
SHKBP1-222ENST00000600320 ZNF330Q9Y3S2 320 aaPredicted RBP25.74■■□□□ 1.71
SHKBP1-222ENST00000600320 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP25.73■■□□□ 1.71
SHKBP1-222ENST00000600320 COL15A1P39059 1388 aa25.72■■□□□ 1.71
SHKBP1-222ENST00000600320 SSH1Q8WYL5 1049 aa25.72■■□□□ 1.71
SHKBP1-222ENST00000600320 QSER1Q2KHR3 1735 aa25.71■■□□□ 1.71
SHKBP1-222ENST00000600320 SSFA2P28290 1259 aa25.71■■□□□ 1.71
SHKBP1-222ENST00000600320 COL23A1Q86Y22 540 aaPredicted RBP25.71■■□□□ 1.71
SHKBP1-222ENST00000600320 ARHGEF1Q92888 912 aaKnown RBP25.71■■□□□ 1.71
SHKBP1-222ENST00000600320 BCL2L13Q9BXK5 485 aa25.71■■□□□ 1.71
SHKBP1-222ENST00000600320 STK31Q9BXU1 1019 aa25.71■■□□□ 1.71
SHKBP1-222ENST00000600320 RARSP54136 660 aaKnown RBP25.7■■□□□ 1.7
SHKBP1-222ENST00000600320 R3HDM1Q15032 1099 aaKnown RBP25.7■■□□□ 1.7
SHKBP1-222ENST00000600320 G2E3Q7L622 706 aa25.7■■□□□ 1.7
SHKBP1-222ENST00000600320 CHMP4AQ9BY43 222 aa25.7■■□□□ 1.7
SHKBP1-222ENST00000600320 PHAXQ9H814 394 aaKnown RBP25.7■■□□□ 1.7
SHKBP1-222ENST00000600320 C4AP0C0L4 1744 aa25.69■■□□□ 1.7
SHKBP1-222ENST00000600320 SLC4A2P04920 1241 aa25.69■■□□□ 1.7
SHKBP1-222ENST00000600320 TRAPPC3LQ5T215 181 aa25.69■■□□□ 1.7
SHKBP1-222ENST00000600320 TTLL7Q6ZT98 887 aa25.69■■□□□ 1.7
SHKBP1-222ENST00000600320 MRPL50Q8N5N7 158 aaKnown RBP25.69■■□□□ 1.7
SHKBP1-222ENST00000600320 XAGE3Q8WTP9 111 aa25.69■■□□□ 1.7
SHKBP1-222ENST00000600320 ZNF428Q96B54 188 aa25.69■■□□□ 1.7
SHKBP1-222ENST00000600320 PDGFDQ9GZP0 370 aaPredicted RBP25.69■■□□□ 1.7
SHKBP1-222ENST00000600320 PSDA5PKW4 1024 aaPredicted RBP25.68■■□□□ 1.7
SHKBP1-222ENST00000600320 ADRA2BP18089 450 aa25.68■■□□□ 1.7
SHKBP1-222ENST00000600320 HYPKQ9NX55 129 aa25.68■■□□□ 1.7
SHKBP1-222ENST00000600320 AIMP1Q12904 312 aaKnown RBP25.67■■□□□ 1.7
SHKBP1-222ENST00000600320 ALDH1L2Q3SY69 923 aa25.67■■□□□ 1.7
SHKBP1-222ENST00000600320 COPS6Q7L5N1 327 aa25.67■■□□□ 1.7
SHKBP1-222ENST00000600320 SRP68Q9UHB9 627 aaKnown RBP25.67■■□□□ 1.7
SHKBP1-222ENST00000600320 TBC1D2BQ9UPU7 963 aa25.67■■□□□ 1.7
SHKBP1-222ENST00000600320 SRCAPQ6ZRS2 3230 aa25.67■■□□□ 1.7
SHKBP1-222ENST00000600320 DZIP3Q86Y13 1208 aaKnown RBP25.66■■□□□ 1.7
SHKBP1-222ENST00000600320 SMC4Q9NTJ3 1288 aa25.66■■□□□ 1.7
SHKBP1-222ENST00000600320 A0A087WZG4 1122 aa25.65■■□□□ 1.7
SHKBP1-222ENST00000600320 FLAD1Q8NFF5 587 aa25.65■■□□□ 1.7
SHKBP1-222ENST00000600320 RFC4P35249 363 aa25.64■■□□□ 1.7
SHKBP1-222ENST00000600320 ARXQ96QS3 562 aa25.64■■□□□ 1.7
SHKBP1-222ENST00000600320 CACNA1FO60840 1977 aa25.64■■□□□ 1.69
SHKBP1-222ENST00000600320 USP42Q9H9J4 1324 aaKnown RBP25.63■■□□□ 1.69
SHKBP1-222ENST00000600320 MSH5O43196 834 aa25.63■■□□□ 1.69
SHKBP1-222ENST00000600320 BCAR3O75815 825 aa25.63■■□□□ 1.69
SHKBP1-222ENST00000600320 CAMTA2O94983 1202 aa25.63■■□□□ 1.69
SHKBP1-222ENST00000600320 NPM2Q86SE8 214 aaKnown RBP25.63■■□□□ 1.69
SHKBP1-222ENST00000600320 BCL2L12Q9HB09 334 aa25.63■■□□□ 1.69
SHKBP1-222ENST00000600320 NARFQ9UHQ1 456 aa25.63■■□□□ 1.69
SHKBP1-222ENST00000600320 CASZ1Q86V15 1759 aa25.63■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms