RNA–Protein interactions for RNA: ENST00000600006.5

CHMP2A-205, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 2

Gene CHMP2A, Length 766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-205ENST00000600006 KLHL34Q8N239 644 aa10.56□□□□□ -0.72
CHMP2A-205ENST00000600006 NLGN1Q8N2Q7 840 aa10.56□□□□□ -0.72
CHMP2A-205ENST00000600006 C10orf71Q711Q0 1435 aa10.56□□□□□ -0.72
CHMP2A-205ENST00000600006 CHD4Q14839 1912 aa10.56□□□□□ -0.72
CHMP2A-205ENST00000600006 BRCA1P38398 1863 aaKnown RBP10.55□□□□□ -0.72
CHMP2A-205ENST00000600006 STARD3NLO95772 234 aa10.55□□□□□ -0.72
CHMP2A-205ENST00000600006 NLGN2Q8NFZ4 835 aa10.55□□□□□ -0.72
CHMP2A-205ENST00000600006 TEX13AQ9BXU3 409 aaPredicted RBP10.55□□□□□ -0.72
CHMP2A-205ENST00000600006 CD2APQ9Y5K6 639 aa10.55□□□□□ -0.72
CHMP2A-205ENST00000600006 AFDNP55196 1824 aaKnown RBP10.55□□□□□ -0.72
CHMP2A-205ENST00000600006 DCAF8L1A6NGE4 600 aa10.54□□□□□ -0.72
CHMP2A-205ENST00000600006 MMP10P09238 476 aa10.54□□□□□ -0.72
CHMP2A-205ENST00000600006 WDR43Q15061 677 aaKnown RBP eCLIP10.54□□□□□ -0.72
CHMP2A-205ENST00000600006 TAF7Q15545 349 aaPredicted RBP10.54□□□□□ -0.72
CHMP2A-205ENST00000600006 SRP68Q9UHB9 627 aaKnown RBP10.54□□□□□ -0.72
CHMP2A-205ENST00000600006 N4BP2Q86UW6 1770 aaPredicted RBP10.53□□□□□ -0.72
CHMP2A-205ENST00000600006 TMPOP42166 694 aaKnown RBP10.53□□□□□ -0.72
CHMP2A-205ENST00000600006 EIF5P55010 431 aaKnown RBP10.53□□□□□ -0.72
CHMP2A-205ENST00000600006 PNISRQ8TF01 805 aaKnown RBP10.53□□□□□ -0.72
CHMP2A-205ENST00000600006 THUMPD2Q9BTF0 503 aaKnown RBP10.53□□□□□ -0.72
CHMP2A-205ENST00000600006 NARFQ9UHQ1 456 aa10.53□□□□□ -0.72
CHMP2A-205ENST00000600006 PXDNLA1KZ92 1463 aa10.53□□□□□ -0.72
CHMP2A-205ENST00000600006 DLEC1Q9Y238 1755 aa10.52□□□□□ -0.72
CHMP2A-205ENST00000600006 SNRPA1P09661 255 aaKnown RBP10.52□□□□□ -0.73
CHMP2A-205ENST00000600006 CANXP27824 592 aaKnown RBP10.52□□□□□ -0.73
CHMP2A-205ENST00000600006 IL6STP40189 918 aaPredicted RBP10.52□□□□□ -0.73
CHMP2A-205ENST00000600006 LMOD3Q0VAK6 560 aa10.52□□□□□ -0.73
CHMP2A-205ENST00000600006 FKBP8Q14318 412 aa10.52□□□□□ -0.73
CHMP2A-205ENST00000600006 RUNDC1Q96C34 613 aa10.52□□□□□ -0.73
CHMP2A-205ENST00000600006 ADAMTS8Q9UP79 889 aa10.52□□□□□ -0.73
CHMP2A-205ENST00000600006 A0A087WZG4 1122 aa10.51□□□□□ -0.73
CHMP2A-205ENST00000600006 PRAMEF22A3QJZ6 481 aa10.51□□□□□ -0.73
CHMP2A-205ENST00000600006 ZPR1O75312 459 aa10.51□□□□□ -0.73
CHMP2A-205ENST00000600006 RIPK4P57078 832 aa10.51□□□□□ -0.73
CHMP2A-205ENST00000600006 DDR1Q08345 913 aa10.51□□□□□ -0.73
CHMP2A-205ENST00000600006 USPL1Q5W0Q7 1092 aa10.51□□□□□ -0.73
CHMP2A-205ENST00000600006 CCDC146Q8IYE0 955 aa10.51□□□□□ -0.73
CHMP2A-205ENST00000600006 BCL2L12Q9HB09 334 aa10.51□□□□□ -0.73
CHMP2A-205ENST00000600006 USP16Q9Y5T5 823 aa10.51□□□□□ -0.73
CHMP2A-205ENST00000600006 ARFGEF1Q9Y6D6 1849 aa10.5□□□□□ -0.73
CHMP2A-205ENST00000600006 A1BGP04217 495 aa10.5□□□□□ -0.73
CHMP2A-205ENST00000600006 TM4SF1P30408 202 aa10.5□□□□□ -0.73
CHMP2A-205ENST00000600006 MIS18AQ9NYP9 233 aa10.5□□□□□ -0.73
CHMP2A-205ENST00000600006 RRP7AQ9Y3A4 280 aaKnown RBP10.5□□□□□ -0.73
CHMP2A-205ENST00000600006 PARP3Q9Y6F1 533 aa10.5□□□□□ -0.73
CHMP2A-205ENST00000600006 ANKRD31Q8N7Z5 1873 aa10.5□□□□□ -0.73
CHMP2A-205ENST00000600006 POLRMTO00411 1230 aaKnown RBP10.49□□□□□ -0.73
CHMP2A-205ENST00000600006 YBX3P16989 372 aaKnown RBP eCLIP10.49□□□□□ -0.731e-11■■□□□ 11.5
CHMP2A-205ENST00000600006 EIF4A1P60842 406 aaKnown RBP10.49□□□□□ -0.73
CHMP2A-205ENST00000600006 GPR162Q16538 588 aa10.49□□□□□ -0.73
CHMP2A-205ENST00000600006 BABAM1Q9NWV8 329 aa10.49□□□□□ -0.73
CHMP2A-205ENST00000600006 GIGYF1O75420 1035 aaPredicted RBP10.48□□□□□ -0.73
CHMP2A-205ENST00000600006 NFIXQ14938 502 aa10.48□□□□□ -0.73
CHMP2A-205ENST00000600006 CCDC184Q52MB2 194 aa10.48□□□□□ -0.73
CHMP2A-205ENST00000600006 TSPYL4Q9UJ04 414 aa10.48□□□□□ -0.73
CHMP2A-205ENST00000600006 TRIM35Q9UPQ4 493 aa10.48□□□□□ -0.73
CHMP2A-205ENST00000600006 COL11A2P13942 1736 aaPredicted RBP10.47□□□□□ -0.73
CHMP2A-205ENST00000600006 NBPF26B4DH59 902 aa10.47□□□□□ -0.73
CHMP2A-205ENST00000600006 ANP32CO43423 234 aa10.47□□□□□ -0.73
CHMP2A-205ENST00000600006 CAMTA2O94983 1202 aa10.47□□□□□ -0.73
CHMP2A-205ENST00000600006 YY1P25490 414 aa10.47□□□□□ -0.73
CHMP2A-205ENST00000600006 TGFB2P61812 414 aa10.47□□□□□ -0.73
CHMP2A-205ENST00000600006 NBPF10Q6P3W6 841 aaKnown RBP10.47□□□□□ -0.73
CHMP2A-205ENST00000600006 PELP1Q8IZL8 1130 aaKnown RBP10.47□□□□□ -0.73
CHMP2A-205ENST00000600006 NBPF15Q8N660 670 aa10.47□□□□□ -0.73
CHMP2A-205ENST00000600006 TBC1D2BQ9UPU7 963 aa10.47□□□□□ -0.73
CHMP2A-205ENST00000600006 ZNF330Q9Y3S2 320 aaPredicted RBP10.47□□□□□ -0.73
CHMP2A-205ENST00000600006 NUP98P52948 1817 aa10.47□□□□□ -0.73
CHMP2A-205ENST00000600006 RGL2O15211 777 aa10.46□□□□□ -0.73
CHMP2A-205ENST00000600006 GRIN3BO60391 1043 aa10.46□□□□□ -0.73
CHMP2A-205ENST00000600006 PIP4K2AP48426 406 aaPredicted RBP10.46□□□□□ -0.73
CHMP2A-205ENST00000600006 NEUROD2Q15784 382 aa10.46□□□□□ -0.73
CHMP2A-205ENST00000600006 DZIP3Q86Y13 1208 aaKnown RBP10.46□□□□□ -0.73
CHMP2A-205ENST00000600006 ERBB4Q15303 1308 aa10.46□□□□□ -0.73
CHMP2A-205ENST00000600006 CARMIL3Q8ND23 1372 aa10.46□□□□□ -0.74
CHMP2A-205ENST00000600006 ANKRD36CQ5JPF3 1778 aa10.45□□□□□ -0.74
CHMP2A-205ENST00000600006 ARFGEF2Q9Y6D5 1785 aa10.45□□□□□ -0.74
CHMP2A-205ENST00000600006 CHL1O00533 1208 aa10.45□□□□□ -0.74
CHMP2A-205ENST00000600006 SERPINB2P05120 415 aa10.45□□□□□ -0.74
CHMP2A-205ENST00000600006 TBC1D9BQ66K14 1250 aa10.45□□□□□ -0.74
CHMP2A-205ENST00000600006 NPM2Q86SE8 214 aaKnown RBP10.45□□□□□ -0.74
CHMP2A-205ENST00000600006 APAF1O14727 1248 aa10.44□□□□□ -0.74
CHMP2A-205ENST00000600006 DPEP1P16444 411 aa10.44□□□□□ -0.74
CHMP2A-205ENST00000600006 MRS2Q9HD23 443 aa10.44□□□□□ -0.74
CHMP2A-205ENST00000600006 A0A0G2JLW4 131 aa10.43□□□□□ -0.74
CHMP2A-205ENST00000600006 KCNA3P22001 575 aa10.43□□□□□ -0.74
CHMP2A-205ENST00000600006 CLEC4GQ6UXB4 293 aa10.43□□□□□ -0.74
CHMP2A-205ENST00000600006 BICDL1Q6ZP65 573 aa10.43□□□□□ -0.74
CHMP2A-205ENST00000600006 ZNF652Q9Y2D9 606 aa10.43□□□□□ -0.74
CHMP2A-205ENST00000600006 CACNA1SQ13698 1873 aa10.42□□□□□ -0.74
CHMP2A-205ENST00000600006 ATP10DQ9P241 1426 aa10.42□□□□□ -0.74
CHMP2A-205ENST00000600006 ADCY9O60503 1353 aa10.42□□□□□ -0.74
CHMP2A-205ENST00000600006 TNRC6CQ9HCJ0 1690 aaKnown RBP10.42□□□□□ -0.74
CHMP2A-205ENST00000600006 ZNF853P0CG23 659 aa10.42□□□□□ -0.74
CHMP2A-205ENST00000600006 PRR5LQ6MZQ0 368 aa10.42□□□□□ -0.74
CHMP2A-205ENST00000600006 LRP10Q7Z4F1 713 aa10.42□□□□□ -0.74
CHMP2A-205ENST00000600006 CFAP44Q96MT7 982 aa10.42□□□□□ -0.74
CHMP2A-205ENST00000600006 WWC3Q9ULE0 1092 aa10.42□□□□□ -0.74
CHMP2A-205ENST00000600006 MAP3K15Q6ZN16 1313 aa10.41□□□□□ -0.74
CHMP2A-205ENST00000600006 HOXB7P09629 217 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms