RNA–Protein interactions for RNA: ENST00000599699.2

SSBP4-206, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene SSBP4, Length 793 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-206ENST00000599699 MIS18AQ9NYP9 233 aa37.1■■■■□ 3.53
SSBP4-206ENST00000599699 MYH14Q7Z406 1995 aaKnown RBP37.09■■■■□ 3.53
SSBP4-206ENST00000599699 PNISRQ8TF01 805 aaKnown RBP37.08■■■■□ 3.53
SSBP4-206ENST00000599699 MRS2Q9HD23 443 aa37.06■■■■□ 3.52
SSBP4-206ENST00000599699 ZBTB1Q9Y2K1 713 aa37.05■■■■□ 3.52
SSBP4-206ENST00000599699 CANXP27824 592 aaKnown RBP37.04■■■■□ 3.52
SSBP4-206ENST00000599699 COL24A1Q17RW2 1714 aa37.04■■■■□ 3.52
SSBP4-206ENST00000599699 SYT17Q9BSW7 474 aa37.03■■■■□ 3.52
SSBP4-206ENST00000599699 SOS1Q07889 1333 aaPredicted RBP37.02■■■■□ 3.52
SSBP4-206ENST00000599699 SNRPA1P09661 255 aaKnown RBP37.01■■■■□ 3.52
SSBP4-206ENST00000599699 NLGN1Q8N2Q7 840 aa36.99■■■■□ 3.51
SSBP4-206ENST00000599699 SRP68Q9UHB9 627 aaKnown RBP36.99■■■■□ 3.51
SSBP4-206ENST00000599699 GYS1P13807 737 aa36.98■■■■□ 3.51
SSBP4-206ENST00000599699 ZPR1O75312 459 aa36.97■■■■□ 3.51
SSBP4-206ENST00000599699 TSPYL4Q9UJ04 414 aa36.97■■■■□ 3.51
SSBP4-206ENST00000599699 COL15A1P39059 1388 aa36.96■■■■□ 3.51
SSBP4-206ENST00000599699 USP42Q9H9J4 1324 aaKnown RBP36.96■■■■□ 3.51
SSBP4-206ENST00000599699 PRAMEF22A3QJZ6 481 aa36.96■■■■□ 3.51
SSBP4-206ENST00000599699 APAF1O14727 1248 aa36.96■■■■□ 3.51
SSBP4-206ENST00000599699 MMP10P09238 476 aa36.96■■■■□ 3.51
SSBP4-206ENST00000599699 ZNF330Q9Y3S2 320 aaPredicted RBP36.96■■■■□ 3.51
SSBP4-206ENST00000599699 USP16Q9Y5T5 823 aa36.96■■■■□ 3.51
SSBP4-206ENST00000599699 A1BGP04217 495 aa36.95■■■■□ 3.51
SSBP4-206ENST00000599699 TRIM35Q9UPQ4 493 aa36.95■■■■□ 3.51
SSBP4-206ENST00000599699 DCAF8L1A6NGE4 600 aa36.94■■■■□ 3.5
SSBP4-206ENST00000599699 NPM2Q86SE8 214 aaKnown RBP36.94■■■■□ 3.5
SSBP4-206ENST00000599699 C4AP0C0L4 1744 aa36.93■■■■□ 3.5
SSBP4-206ENST00000599699 EIF4A1P60842 406 aaKnown RBP36.91■■■■□ 3.5
SSBP4-206ENST00000599699 USPL1Q5W0Q7 1092 aa36.91■■■■□ 3.5
SSBP4-206ENST00000599699 LAS1LQ9Y4W2 734 aaKnown RBP36.91■■■■□ 3.5
SSBP4-206ENST00000599699 A0A087WZG4 1122 aa36.9■■■■□ 3.5
SSBP4-206ENST00000599699 EIF5P55010 431 aaKnown RBP36.9■■■■□ 3.5
SSBP4-206ENST00000599699 KDM3BQ7LBC6 1761 aa36.89■■■■□ 3.5
SSBP4-206ENST00000599699 IL6STP40189 918 aaPredicted RBP36.89■■■■□ 3.5
SSBP4-206ENST00000599699 FKBP8Q14318 412 aa36.89■■■■□ 3.5
SSBP4-206ENST00000599699 BABAM1Q9NWV8 329 aa36.89■■■■□ 3.5
SSBP4-206ENST00000599699 NARFQ9UHQ1 456 aa36.89■■■■□ 3.5
SSBP4-206ENST00000599699 PIP4K2AP48426 406 aaPredicted RBP36.87■■■■□ 3.49
SSBP4-206ENST00000599699 PARP3Q9Y6F1 533 aa36.87■■■■□ 3.49
SSBP4-206ENST00000599699 GIGYF1O75420 1035 aaPredicted RBP36.86■■■■□ 3.49
SSBP4-206ENST00000599699 NLGN2Q8NFZ4 835 aa36.86■■■■□ 3.49
SSBP4-206ENST00000599699 CD2APQ9Y5K6 639 aa36.85■■■■□ 3.49
SSBP4-206ENST00000599699 TBC1D2BQ9UPU7 963 aa36.83■■■■□ 3.49
SSBP4-206ENST00000599699 SENP3-EIF4A1A0A087X0R7 540 aa36.81■■■■□ 3.48
SSBP4-206ENST00000599699 CHL1O00533 1208 aa36.8■■■■□ 3.48
SSBP4-206ENST00000599699 CALD1Q05682 793 aaKnown RBP36.78■■■■□ 3.48
SSBP4-206ENST00000599699 PELP1Q8IZL8 1130 aaKnown RBP36.78■■■■□ 3.48
SSBP4-206ENST00000599699 FAM9BQ8IZU0 186 aa36.78■■■■□ 3.48
SSBP4-206ENST00000599699 NBPF26B4DH59 902 aa36.77■■■■□ 3.48
SSBP4-206ENST00000599699 NBPF10Q6P3W6 841 aaKnown RBP36.77■■■■□ 3.48
SSBP4-206ENST00000599699 DZIP3Q86Y13 1208 aaKnown RBP36.77■■■■□ 3.48
SSBP4-206ENST00000599699 NBPF15Q8N660 670 aa36.77■■■■□ 3.48
SSBP4-206ENST00000599699 BCL2L12Q9HB09 334 aa36.77■■■■□ 3.48
SSBP4-206ENST00000599699 DDR1Q08345 913 aa36.76■■■■□ 3.48
SSBP4-206ENST00000599699 TM4SF1P30408 202 aa36.75■■■■□ 3.47
SSBP4-206ENST00000599699 GPR162Q16538 588 aa36.75■■■■□ 3.47
SSBP4-206ENST00000599699 CFAP44Q96MT7 982 aa36.75■■■■□ 3.47
SSBP4-206ENST00000599699 NFIXQ14938 502 aa36.74■■■■□ 3.47
SSBP4-206ENST00000599699 LAMB4A4D0S4 1761 aa36.73■■■■□ 3.47
SSBP4-206ENST00000599699 EIF2S2P20042 333 aaKnown RBP36.73■■■■□ 3.47
SSBP4-206ENST00000599699 BICDL1Q6ZP65 573 aa36.73■■■■□ 3.47
SSBP4-206ENST00000599699 POLRMTO00411 1230 aaKnown RBP36.72■■■■□ 3.47
SSBP4-206ENST00000599699 NGEFQ8N5V2 710 aa36.72■■■■□ 3.47
SSBP4-206ENST00000599699 CAMTA2O94983 1202 aa36.71■■■■□ 3.47
SSBP4-206ENST00000599699 MYL6BP14649 208 aa36.7■■■■□ 3.47
SSBP4-206ENST00000599699 IFT57Q9NWB7 429 aa36.7■■■■□ 3.47
SSBP4-206ENST00000599699 GNAI1P63096 354 aa36.69■■■■□ 3.46
SSBP4-206ENST00000599699 MBIPQ9NS73 344 aa36.69■■■■□ 3.46
SSBP4-206ENST00000599699 KRT24Q2M2I5 525 aa36.68■■■■□ 3.46
SSBP4-206ENST00000599699 TBC1D9BQ66K14 1250 aa36.68■■■■□ 3.46
SSBP4-206ENST00000599699 C10orf71Q711Q0 1435 aa36.68■■■■□ 3.46
SSBP4-206ENST00000599699 ZNF853P0CG23 659 aa36.66■■■■□ 3.46
SSBP4-206ENST00000599699 CCDC27Q2M243 656 aa36.66■■■■□ 3.46
SSBP4-206ENST00000599699 NECTIN2Q92692 538 aa36.66■■■■□ 3.46
SSBP4-206ENST00000599699 SALL2Q9Y467 1007 aaPredicted RBP36.66■■■■□ 3.46
SSBP4-206ENST00000599699 ERBB4Q15303 1308 aa36.65■■■■□ 3.46
SSBP4-206ENST00000599699 SCN7AQ01118 1682 aa36.65■■■■□ 3.46
SSBP4-206ENST00000599699 SERPINB2P05120 415 aa36.65■■■■□ 3.46
SSBP4-206ENST00000599699 ZNF652Q9Y2D9 606 aa36.65■■■■□ 3.46
SSBP4-206ENST00000599699 WWC3Q9ULE0 1092 aa36.64■■■■□ 3.46
SSBP4-206ENST00000599699 TGFB2P61812 414 aa36.63■■■■□ 3.45
SSBP4-206ENST00000599699 WWC1Q8IX03 1113 aa36.63■■■■□ 3.45
SSBP4-206ENST00000599699 SETDB2Q96T68 719 aa36.62■■■■□ 3.45
SSBP4-206ENST00000599699 CLEC4GQ6UXB4 293 aa36.61■■■■□ 3.45
SSBP4-206ENST00000599699 KIF6Q6ZMV9 814 aa36.61■■■■□ 3.45
SSBP4-206ENST00000599699 A0A0G2JLW4 131 aa36.6■■■■□ 3.45
SSBP4-206ENST00000599699 NCBP3Q53F19 620 aaKnown RBP36.59■■■■□ 3.45
SSBP4-206ENST00000599699 DUSP27Q5VZP5 1158 aa36.59■■■■□ 3.45
SSBP4-206ENST00000599699 PXDNLA1KZ92 1463 aa36.58■■■■□ 3.45
SSBP4-206ENST00000599699 CARMIL3Q8ND23 1372 aa36.58■■■■□ 3.45
SSBP4-206ENST00000599699 YBX3P16989 372 aaKnown RBP eCLIP36.58■■■■□ 3.45
SSBP4-206ENST00000599699 HDGFL1Q5TGJ6 251 aa36.58■■■■□ 3.45
SSBP4-206ENST00000599699 NPHP1O15259 732 aa36.57■■■■□ 3.44
SSBP4-206ENST00000599699 ANXA1P04083 346 aa36.57■■■■□ 3.44
SSBP4-206ENST00000599699 HOXB7P09629 217 aa36.57■■■■□ 3.44
SSBP4-206ENST00000599699 DPEP1P16444 411 aa36.57■■■■□ 3.44
SSBP4-206ENST00000599699 TTLL7Q6ZT98 887 aa36.57■■■■□ 3.44
SSBP4-206ENST00000599699 BCORQ6W2J9 1755 aa36.56■■■■□ 3.44
SSBP4-206ENST00000599699 PDIA6Q15084 440 aa36.56■■■■□ 3.44
SSBP4-206ENST00000599699 KIF13BQ9NQT8 1826 aa36.56■■■■□ 3.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms