RNA–Protein interactions for RNA: ENST00000599082.1

SOX2-OT-231, SOX2 overlapping transcript, human

TSL 5

Gene SOX2-OT, Length 839 nt, Biotype sense overlapping.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SOX2-OT-231	ENST00000599082	PSMA6	P60900	246 aa	Known RBP	11.59	□□□□□ -0.55
SOX2-OT-231	ENST00000599082	SLC27A3	Q5K4L6	730 aa		11.59	□□□□□ -0.55
SOX2-OT-231	ENST00000599082	GZF1	Q9H116	711 aa	Predicted RBP	11.59	□□□□□ -0.55
SOX2-OT-231	ENST00000599082	SCARF1	Q14162	830 aa		11.58	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	TMEM214	Q6NUQ4	689 aa	Known RBP	11.58	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	POTEA	Q6S8J7	498 aa		11.58	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	ZDHHC1	Q8WTX9	485 aa		11.58	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	COL26A1	Q96A83	441 aa		11.58	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	PODXL2	Q9NZ53	605 aa		11.58	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	PTCD1	O75127	700 aa	Known RBP	11.57	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	SERPINB4	P48594	390 aa		11.57	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	TEAD4	Q15561	434 aa		11.57	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	CABP1	Q9NZU7	370 aa		11.57	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	SEPT3	Q9UH03	358 aa		11.57	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	NFX1	Q12986	1120 aa	Known RBP	11.56	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	RNF217	Q8TC41	542 aa		11.56	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	RHBDD1	Q8TEB9	315 aa		11.56	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	GMPR2	Q9P2T1	348 aa	Known RBP	11.56	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	MTMR7	Q9Y216	660 aa		11.56	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	SERTM1	A2A2V5	107 aa		11.55	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	EML1	O00423	815 aa		11.55	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	GTF2E1	P29083	439 aa	Predicted RBP	11.55	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	NOS2	P35228	1153 aa		11.55	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	SH3PXD2A	Q5TCZ1	1133 aa		11.55	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	VTI1A	Q96AJ9	217 aa		11.55	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	NIFK	Q9BYG3	293 aa	Known RBP	11.55	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	CHMP3	Q9Y3E7	222 aa		11.55	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	C11orf95	C9JLR9	678 aa	Predicted RBP	11.54	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	WIPF1	O43516	503 aa		11.54	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	C4orf17	Q53FE4	359 aa		11.54	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	GNAS	Q5JWF2	1037 aa		11.54	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	L3MBTL2	Q969R5	705 aa		11.54	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	ZFP42	Q96MM3	310 aa		11.54	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	PARP3	Q9Y6F1	533 aa		11.54	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	SOS2	Q07890	1332 aa	Predicted RBP	11.54	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	TTLL8	A6PVC2	850 aa		11.53	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	SPATA31C2	B4DYI2	1134 aa		11.53	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	HIRA	P54198	1017 aa	Predicted RBP	11.53	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	NAA30	Q147X3	362 aa	Predicted RBP	11.53	□□□□□ -0.56
SOX2-OT-231	ENST00000599082	PRICKLE2	Q7Z3G6	844 aa		11.52	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	GTF3C2	Q8WUA4	911 aa	Predicted RBP	11.52	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	ZNF232	Q9UNY5	417 aa		11.52	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	INSM1	Q01101	510 aa	Predicted RBP	11.51	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	POU4F2	Q12837	409 aa		11.51	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	LYSMD3	Q7Z3D4	306 aa		11.51	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	ATP13A2	Q9NQ11	1180 aa		11.51	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	11.51	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	DNMT3A	Q9Y6K1	912 aa	Predicted RBP	11.51	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	FIGNL2	A6NMB9	653 aa		11.5	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	ABL1	P00519	1130 aa		11.5	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	PLA2G4A	P47712	749 aa		11.5	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	NBPF10	Q6P3W6	841 aa	Known RBP	11.5	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	SAP130	Q9H0E3	1048 aa		11.5	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	EGFL7	Q9UHF1	273 aa		11.5	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	HCN4	Q9Y3Q4	1203 aa		11.5	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	SOWAHD	A6NJG2	315 aa		11.49	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	PHKA2	P46019	1235 aa		11.49	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	ZNF211	Q13398	564 aa	Predicted RBP	11.49	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	SND1	Q7KZF4	910 aa	Known RBP eCLIP	11.49	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	QTRT2	Q9H974	415 aa	Known RBP	11.49	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	TXLNA	P40222	546 aa		11.48	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	C16orf46	Q6P387	395 aa		11.48	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	ALDH16A1	Q8IZ83	802 aa		11.48	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	NGLY1	Q96IV0	654 aa		11.48	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	ANO2	Q9NQ90	1003 aa		11.48	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	WDR44	Q5JSH3	913 aa		11.47	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	COX20	Q5RI15	118 aa		11.47	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	TMCO4	Q5TGY1	634 aa		11.47	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	HELQ	Q8TDG4	1101 aa		11.47	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	MYO19	Q96H55	970 aa		11.47	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	PHACTR1	Q9C0D0	580 aa		11.47	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	DNMT3L	Q9UJW3	386 aa		11.47	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	ICMT	O60725	284 aa		11.46	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	RHOQ	P17081	205 aa		11.46	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	MTMR3	Q13615	1198 aa		11.46	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	LRFN2	Q9ULH4	789 aa		11.46	□□□□□ -0.57
SOX2-OT-231	ENST00000599082	LCE2C	Q5TA81	110 aa		11.45	□□□□□ -0.58
SOX2-OT-231	ENST00000599082	C1orf53	Q5VUE5	145 aa		11.45	□□□□□ -0.58
SOX2-OT-231	ENST00000599082		H3BRB1	525 aa		11.44	□□□□□ -0.58
SOX2-OT-231	ENST00000599082	FKBP4	Q02790	459 aa	Known RBP eCLIP	11.44	□□□□□ -0.58
SOX2-OT-231	ENST00000599082	SF3B2	Q13435	895 aa	Known RBP	11.44	□□□□□ -0.58
SOX2-OT-231	ENST00000599082	RTN1	Q16799	776 aa		11.44	□□□□□ -0.58
SOX2-OT-231	ENST00000599082	AIDA	Q96BJ3	306 aa		11.44	□□□□□ -0.58
SOX2-OT-231	ENST00000599082	TUT1	Q9H6E5	874 aa	Known RBP	11.44	□□□□□ -0.58
SOX2-OT-231	ENST00000599082	ZDHHC3	Q9NYG2	299 aa		11.44	□□□□□ -0.58
SOX2-OT-231	ENST00000599082	TNFRSF10B	O14763	440 aa		11.43	□□□□□ -0.58
SOX2-OT-231	ENST00000599082	NBPF1	Q3BBV0	1214 aa		11.43	□□□□□ -0.58
SOX2-OT-231	ENST00000599082	C7orf43	Q8WVR3	580 aa		11.43	□□□□□ -0.58
SOX2-OT-231	ENST00000599082	ECM1	Q16610	540 aa		11.42	□□□□□ -0.58
SOX2-OT-231	ENST00000599082	ZNF800	Q2TB10	664 aa	Predicted RBP eCLIP	11.42	□□□□□ -0.58
SOX2-OT-231	ENST00000599082	GLYCTK	Q8IVS8	523 aa		11.42	□□□□□ -0.58
SOX2-OT-231	ENST00000599082	TIMMDC1	Q9NPL8	285 aa		11.42	□□□□□ -0.58
SOX2-OT-231	ENST00000599082	MAN1A2	O60476	641 aa		11.41	□□□□□ -0.58
SOX2-OT-231	ENST00000599082	NPR3	P17342	541 aa		11.41	□□□□□ -0.58
SOX2-OT-231	ENST00000599082	SOBP	A7XYQ1	873 aa		11.4	□□□□□ -0.58
SOX2-OT-231	ENST00000599082	ATP4A	P20648	1035 aa		11.4	□□□□□ -0.58
SOX2-OT-231	ENST00000599082	DGKZ	Q13574	1117 aa		11.4	□□□□□ -0.58
SOX2-OT-231	ENST00000599082	CCDC9	Q9Y3X0	531 aa	Known RBP	11.4	□□□□□ -0.58
SOX2-OT-231	ENST00000599082		A0A1B0GTH6	734 aa		11.39	□□□□□ -0.59
SOX2-OT-231	ENST00000599082	TAT	P17735	454 aa	Predicted RBP	11.39	□□□□□ -0.59

Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms