RNA–Protein interactions for RNA: ENST00000597848.1

CHMP2A-204, Transcript of charged multivesicular body protein 2A, humanhuman

TSL 3

Gene CHMP2A, Length 509 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2A-204ENST00000597848 NUP188Q5SRE5 1749 aa28.62■■■□□ 2.17
CHMP2A-204ENST00000597848 EIF2S2P20042 333 aaKnown RBP28.61■■■□□ 2.17
CHMP2A-204ENST00000597848 RC3H1Q5TC82 1133 aaKnown RBP28.61■■■□□ 2.17
CHMP2A-204ENST00000597848 CCDC87Q9NVE4 849 aa28.61■■■□□ 2.17
CHMP2A-204ENST00000597848 CNTNAP4Q9C0A0 1308 aa28.61■■■□□ 2.17
CHMP2A-204ENST00000597848 GNPATO15228 680 aa28.6■■■□□ 2.17
CHMP2A-204ENST00000597848 EXOSC9Q06265 439 aaKnown RBP28.6■■■□□ 2.17
CHMP2A-204ENST00000597848 C5P01031 1676 aa28.6■■■□□ 2.17
CHMP2A-204ENST00000597848 TJP1Q07157 1748 aa28.6■■■□□ 2.17
CHMP2A-204ENST00000597848 A1BGP04217 495 aa28.59■■■□□ 2.17
CHMP2A-204ENST00000597848 INTS5Q6P9B9 1019 aaKnown RBP28.59■■■□□ 2.17
CHMP2A-204ENST00000597848 HOXB7P09629 217 aa28.58■■■□□ 2.17
CHMP2A-204ENST00000597848 CANXP27824 592 aaKnown RBP28.58■■■□□ 2.17
CHMP2A-204ENST00000597848 TSPYL6Q8N831 410 aa28.58■■■□□ 2.17
CHMP2A-204ENST00000597848 NECTIN2Q92692 538 aa28.58■■■□□ 2.17
CHMP2A-204ENST00000597848 C4BP0C0L5 1744 aa28.57■■■□□ 2.16
CHMP2A-204ENST00000597848 TAF1LQ8IZX4 1826 aa28.57■■■□□ 2.16
CHMP2A-204ENST00000597848 R3HDM1Q15032 1099 aaKnown RBP28.56■■■□□ 2.16
CHMP2A-204ENST00000597848 TWISTNBQ3B726 338 aaPredicted RBP28.56■■■□□ 2.16
CHMP2A-204ENST00000597848 ZBTB1Q9Y2K1 713 aa28.56■■■□□ 2.16
CHMP2A-204ENST00000597848 RTCBQ9Y3I0 505 aaKnown RBP28.56■■■□□ 2.16
CHMP2A-204ENST00000597848 CICQ96RK0 1608 aaPredicted RBP28.55■■■□□ 2.16
CHMP2A-204ENST00000597848 RPS6KA4O75676 772 aa28.55■■■□□ 2.16
CHMP2A-204ENST00000597848 PHF14O94880 888 aa28.55■■■□□ 2.16
CHMP2A-204ENST00000597848 HDGFL1Q5TGJ6 251 aa28.55■■■□□ 2.16
CHMP2A-204ENST00000597848 TRMT2AQ8IZ69 625 aaKnown RBP28.55■■■□□ 2.16
CHMP2A-204ENST00000597848 PIP4K2AP48426 406 aaPredicted RBP28.54■■■□□ 2.16
CHMP2A-204ENST00000597848 SMIM5Q71RC9 77 aa28.54■■■□□ 2.16
CHMP2A-204ENST00000597848 ZNF330Q9Y3S2 320 aaPredicted RBP28.54■■■□□ 2.16
CHMP2A-204ENST00000597848 SOS1Q07889 1333 aaPredicted RBP28.53■■■□□ 2.16
CHMP2A-204ENST00000597848 COL5A3P25940 1745 aaPredicted RBP28.53■■■□□ 2.16
CHMP2A-204ENST00000597848 PSDA5PKW4 1024 aaPredicted RBP28.53■■■□□ 2.16
CHMP2A-204ENST00000597848 MSH5O43196 834 aa28.52■■■□□ 2.16
CHMP2A-204ENST00000597848 NPM2Q86SE8 214 aaKnown RBP28.52■■■□□ 2.16
CHMP2A-204ENST00000597848 CHMP4AQ9BY43 222 aa28.52■■■□□ 2.16
CHMP2A-204ENST00000597848 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP28.51■■■□□ 2.15
CHMP2A-204ENST00000597848 TRAPPC3LQ5T215 181 aa28.51■■■□□ 2.15
CHMP2A-204ENST00000597848 AMIGO3Q86WK7 504 aa28.51■■■□□ 2.15
CHMP2A-204ENST00000597848 NBPF26B4DH59 902 aa28.5■■■□□ 2.15
CHMP2A-204ENST00000597848 SSFA2P28290 1259 aa28.5■■■□□ 2.15
CHMP2A-204ENST00000597848 NBPF10Q6P3W6 841 aaKnown RBP28.5■■■□□ 2.15
CHMP2A-204ENST00000597848 NBPF15Q8N660 670 aa28.5■■■□□ 2.15
CHMP2A-204ENST00000597848 FLAD1Q8NFF5 587 aa28.5■■■□□ 2.15
CHMP2A-204ENST00000597848 VAMP4O75379 141 aa28.49■■■□□ 2.15
CHMP2A-204ENST00000597848 MYL6BP14649 208 aa28.49■■■□□ 2.15
CHMP2A-204ENST00000597848 IL6STP40189 918 aaPredicted RBP28.49■■■□□ 2.15
CHMP2A-204ENST00000597848 ERBB4Q15303 1308 aa28.48■■■□□ 2.15
CHMP2A-204ENST00000597848 PNPLA7Q6ZV29 1317 aa28.48■■■□□ 2.15
CHMP2A-204ENST00000597848 CCDC30Q5VVM6 783 aa28.48■■■□□ 2.15
CHMP2A-204ENST00000597848 ARXQ96QS3 562 aa28.48■■■□□ 2.15
CHMP2A-204ENST00000597848 MYH14Q7Z406 1995 aaKnown RBP28.48■■■□□ 2.15
CHMP2A-204ENST00000597848 ADRA2BP18089 450 aa28.47■■■□□ 2.15
CHMP2A-204ENST00000597848 EIF5P55010 431 aaKnown RBP28.47■■■□□ 2.15
CHMP2A-204ENST00000597848 COL23A1Q86Y22 540 aaPredicted RBP28.47■■■□□ 2.15
CHMP2A-204ENST00000597848 CHPF2Q9P2E5 772 aa28.47■■■□□ 2.15
CHMP2A-204ENST00000597848 LAMB4A4D0S4 1761 aa28.47■■■□□ 2.15
CHMP2A-204ENST00000597848 TCERG1O14776 1098 aaKnown RBP28.46■■■□□ 2.15
CHMP2A-204ENST00000597848 ANXA1P04083 346 aa28.46■■■□□ 2.15
CHMP2A-204ENST00000597848 RFC4P35249 363 aa28.46■■■□□ 2.15
CHMP2A-204ENST00000597848 ARHGEF1Q92888 912 aaKnown RBP28.46■■■□□ 2.15
CHMP2A-204ENST00000597848 DBF4Q9UBU7 674 aaPredicted RBP28.46■■■□□ 2.15
CHMP2A-204ENST00000597848 PDIA6Q15084 440 aa28.45■■■□□ 2.14
CHMP2A-204ENST00000597848 STK31Q9BXU1 1019 aa28.45■■■□□ 2.14
CHMP2A-204ENST00000597848 DDX21Q9NR30 783 aaKnown RBP eCLIP28.45■■■□□ 2.14
CHMP2A-204ENST00000597848 A0A087WZG4 1122 aa28.44■■■□□ 2.14
CHMP2A-204ENST00000597848 PROSER3Q2NL68 480 aa28.44■■■□□ 2.14
CHMP2A-204ENST00000597848 COL15A1P39059 1388 aa28.43■■■□□ 2.14
CHMP2A-204ENST00000597848 PDGFDQ9GZP0 370 aaPredicted RBP28.43■■■□□ 2.14
CHMP2A-204ENST00000597848 UBR3Q6ZT12 1888 aa28.41■■■□□ 2.14
CHMP2A-204ENST00000597848 HYPKQ9NX55 129 aa28.41■■■□□ 2.14
CHMP2A-204ENST00000597848 TBC1D2BQ9UPU7 963 aa28.41■■■□□ 2.14
CHMP2A-204ENST00000597848 ZPR1O75312 459 aa28.4■■■□□ 2.14
CHMP2A-204ENST00000597848 DZIP3Q86Y13 1208 aaKnown RBP28.4■■■□□ 2.14
CHMP2A-204ENST00000597848 CT47B1P0C2W7 299 aaPredicted RBP28.39■■■□□ 2.14
CHMP2A-204ENST00000597848 AIMP1Q12904 312 aaKnown RBP28.39■■■□□ 2.14
CHMP2A-204ENST00000597848 SLC4A2P04920 1241 aa28.38■■■□□ 2.13
CHMP2A-204ENST00000597848 SRP68Q9UHB9 627 aaKnown RBP28.38■■■□□ 2.13
CHMP2A-204ENST00000597848 TUBGCP6Q96RT7 1819 aa28.37■■■□□ 2.13
CHMP2A-204ENST00000597848 COPS6Q7L5N1 327 aa28.37■■■□□ 2.13
CHMP2A-204ENST00000597848 XAGE3Q8WTP9 111 aa28.37■■■□□ 2.13
CHMP2A-204ENST00000597848 NARFQ9UHQ1 456 aa28.37■■■□□ 2.13
CHMP2A-204ENST00000597848 USPL1Q5W0Q7 1092 aa28.36■■■□□ 2.13
CHMP2A-204ENST00000597848 KIF6Q6ZMV9 814 aa28.36■■■□□ 2.13
CHMP2A-204ENST00000597848 LRP10Q7Z4F1 713 aa28.36■■■□□ 2.13
CHMP2A-204ENST00000597848 ZNF428Q96B54 188 aa28.36■■■□□ 2.13
CHMP2A-204ENST00000597848 ZBTB7AO95365 584 aa28.35■■■□□ 2.13
CHMP2A-204ENST00000597848 TTLL7Q6ZT98 887 aa28.35■■■□□ 2.13
CHMP2A-204ENST00000597848 SLC16A10Q8TF71 515 aa28.35■■■□□ 2.13
CHMP2A-204ENST00000597848 PHAXQ9H814 394 aaKnown RBP28.35■■■□□ 2.13
CHMP2A-204ENST00000597848 USP42Q9H9J4 1324 aaKnown RBP28.35■■■□□ 2.13
CHMP2A-204ENST00000597848 QSER1Q2KHR3 1735 aa28.34■■■□□ 2.13
CHMP2A-204ENST00000597848 MSL1Q68DK7 614 aa28.32■■■□□ 2.12
CHMP2A-204ENST00000597848 SSH1Q8WYL5 1049 aa28.32■■■□□ 2.12
CHMP2A-204ENST00000597848 CAMTA2O94983 1202 aa28.31■■■□□ 2.12
CHMP2A-204ENST00000597848 GYS1P13807 737 aa28.31■■■□□ 2.12
CHMP2A-204ENST00000597848 ALDH1L2Q3SY69 923 aa28.31■■■□□ 2.12
CHMP2A-204ENST00000597848 BCL2L13Q9BXK5 485 aa28.31■■■□□ 2.12
CHMP2A-204ENST00000597848 ZBTB3Q9H5J0 574 aa28.31■■■□□ 2.12
CHMP2A-204ENST00000597848 ATF5Q9Y2D1 282 aaPredicted RBP28.31■■■□□ 2.12
CHMP2A-204ENST00000597848 MAP3K15Q6ZN16 1313 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms