RNA–Protein interactions for RNA: ENST00000597254.1

SH2D3A-206, Transcript of SH2 domain containing 3A, humanhuman

TSL 4

Gene SH2D3A, Length 586 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D3A-206ENST00000597254 MSH5O43196 834 aa14.74□□□□□ -0.05
SH2D3A-206ENST00000597254 YY1P25490 414 aa14.74□□□□□ -0.05
SH2D3A-206ENST00000597254 POLD1P28340 1107 aa14.74□□□□□ -0.05
SH2D3A-206ENST00000597254 ALDH1L2Q3SY69 923 aa14.74□□□□□ -0.05
SH2D3A-206ENST00000597254 PIGBQ92521 554 aa14.74□□□□□ -0.05
SH2D3A-206ENST00000597254 SMARCC1Q92922 1105 aaPredicted RBP14.74□□□□□ -0.05
SH2D3A-206ENST00000597254 SYT17Q9BSW7 474 aa14.74□□□□□ -0.05
SH2D3A-206ENST00000597254 SOS1Q07889 1333 aaPredicted RBP14.73□□□□□ -0.05
SH2D3A-206ENST00000597254 TTC5Q8N0Z6 440 aa14.73□□□□□ -0.05
SH2D3A-206ENST00000597254 SSH1Q8WYL5 1049 aa14.73□□□□□ -0.05
SH2D3A-206ENST00000597254 ITGB4P16144 1822 aa14.73□□□□□ -0.05
SH2D3A-206ENST00000597254 PALLDQ8WX93 1383 aa14.73□□□□□ -0.05
SH2D3A-206ENST00000597254 HEG1Q9ULI3 1381 aa14.73□□□□□ -0.05
SH2D3A-206ENST00000597254 QSER1Q2KHR3 1735 aa14.72□□□□□ -0.05
SH2D3A-206ENST00000597254 RRP1P56182 461 aaKnown RBP14.72□□□□□ -0.05
SH2D3A-206ENST00000597254 TCERG1O14776 1098 aaKnown RBP14.71□□□□□ -0.05
SH2D3A-206ENST00000597254 GIGYF1O75420 1035 aaPredicted RBP14.71□□□□□ -0.05
SH2D3A-206ENST00000597254 HOXB7P09629 217 aa14.71□□□□□ -0.05
SH2D3A-206ENST00000597254 ZNF496Q96IT1 587 aaPredicted RBP14.71□□□□□ -0.05
SH2D3A-206ENST00000597254 FMNL2Q96PY5 1086 aa14.71□□□□□ -0.05
SH2D3A-206ENST00000597254 BCL2L13Q9BXK5 485 aa14.71□□□□□ -0.05
SH2D3A-206ENST00000597254 ATG3Q9NT62 314 aa14.71□□□□□ -0.05
SH2D3A-206ENST00000597254 SMC4Q9NTJ3 1288 aa14.71□□□□□ -0.05
SH2D3A-206ENST00000597254 PLIN1O60240 522 aa14.7□□□□□ -0.06
SH2D3A-206ENST00000597254 BRPF1P55201 1214 aaPredicted RBP14.7□□□□□ -0.06
SH2D3A-206ENST00000597254 KLHL34Q8N239 644 aa14.7□□□□□ -0.06
SH2D3A-206ENST00000597254 MRPL50Q8N5N7 158 aaKnown RBP14.7□□□□□ -0.06
SH2D3A-206ENST00000597254 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.7□□□□□ -0.06
SH2D3A-206ENST00000597254 ASAP1Q9ULH1 1129 aa14.7□□□□□ -0.06
SH2D3A-206ENST00000597254 TUBGCP6Q96RT7 1819 aa14.69□□□□□ -0.06
SH2D3A-206ENST00000597254 CCDC30Q5VVM6 783 aa14.69□□□□□ -0.06
SH2D3A-206ENST00000597254 PRAMEF22A3QJZ6 481 aa14.68□□□□□ -0.06
SH2D3A-206ENST00000597254 SNRPA1P09661 255 aaKnown RBP14.68□□□□□ -0.06
SH2D3A-206ENST00000597254 EIF2S2P20042 333 aaKnown RBP14.68□□□□□ -0.06
SH2D3A-206ENST00000597254 COL23A1Q86Y22 540 aaPredicted RBP14.68□□□□□ -0.06
SH2D3A-206ENST00000597254 FLAD1Q8NFF5 587 aa14.68□□□□□ -0.06
SH2D3A-206ENST00000597254 NECTIN2Q92692 538 aa14.68□□□□□ -0.06
SH2D3A-206ENST00000597254 AK7Q96M32 723 aa14.68□□□□□ -0.06
SH2D3A-206ENST00000597254 CHMP4AQ9BY43 222 aa14.68□□□□□ -0.06
SH2D3A-206ENST00000597254 PTCD1O75127 700 aaKnown RBP14.67□□□□□ -0.06
SH2D3A-206ENST00000597254 NEFLP07196 543 aa14.67□□□□□ -0.06
SH2D3A-206ENST00000597254 IRX6P78412 446 aaPredicted RBP14.67□□□□□ -0.06
SH2D3A-206ENST00000597254 HDGFL1Q5TGJ6 251 aa14.67□□□□□ -0.06
SH2D3A-206ENST00000597254 FRAT1Q92837 279 aaPredicted RBP14.67□□□□□ -0.06
SH2D3A-206ENST00000597254 NOB1Q9ULX3 412 aaKnown RBP14.67□□□□□ -0.06
SH2D3A-206ENST00000597254 USP16Q9Y5T5 823 aa14.67□□□□□ -0.06
SH2D3A-206ENST00000597254 C5P01031 1676 aa14.67□□□□□ -0.06
SH2D3A-206ENST00000597254 SLC4A2P04920 1241 aa14.66□□□□□ -0.06
SH2D3A-206ENST00000597254 FKBP8Q14318 412 aa14.66□□□□□ -0.06
SH2D3A-206ENST00000597254 STK31Q9BXU1 1019 aa14.66□□□□□ -0.06
SH2D3A-206ENST00000597254 KCPQ6ZWJ8 1503 aa14.66□□□□□ -0.06
SH2D3A-206ENST00000597254 TAF1LQ8IZX4 1826 aa14.65□□□□□ -0.06
SH2D3A-206ENST00000597254 LOC102724428A0A0B4J2F2 783 aa14.65□□□□□ -0.06
SH2D3A-206ENST00000597254 IPO8O15397 1037 aaKnown RBP14.65□□□□□ -0.06
SH2D3A-206ENST00000597254 CANXP27824 592 aaKnown RBP14.65□□□□□ -0.06
SH2D3A-206ENST00000597254 SIK1P57059 783 aa14.65□□□□□ -0.06
SH2D3A-206ENST00000597254 GPR162Q16538 588 aa14.65□□□□□ -0.06
SH2D3A-206ENST00000597254 ZKSCAN2Q63HK3 967 aa14.65□□□□□ -0.06
SH2D3A-206ENST00000597254 MSL1Q68DK7 614 aa14.65□□□□□ -0.06
SH2D3A-206ENST00000597254 VSIG10Q8N0Z9 540 aa14.65□□□□□ -0.06
SH2D3A-206ENST00000597254 RBM42Q9BTD8 480 aaKnown RBP14.65□□□□□ -0.06
SH2D3A-206ENST00000597254 GTF3C3Q9Y5Q9 886 aa14.65□□□□□ -0.06
SH2D3A-206ENST00000597254 UBR2Q8IWV8 1755 aa14.65□□□□□ -0.06
SH2D3A-206ENST00000597254 ARHGAP45Q92619 1136 aa14.64□□□□□ -0.07
SH2D3A-206ENST00000597254 KIF16BQ96L93 1317 aa14.64□□□□□ -0.07
SH2D3A-206ENST00000597254 ATP6V1AP38606 617 aa14.63□□□□□ -0.07
SH2D3A-206ENST00000597254 C20orf194Q5TEA3 1177 aa14.63□□□□□ -0.07
SH2D3A-206ENST00000597254 ATF7IPQ6VMQ6 1270 aa14.63□□□□□ -0.07
SH2D3A-206ENST00000597254 G2E3Q7L622 706 aa14.63□□□□□ -0.07
SH2D3A-206ENST00000597254 PELP1Q8IZL8 1130 aaKnown RBP14.63□□□□□ -0.07
SH2D3A-206ENST00000597254 TEX13AQ9BXU3 409 aaPredicted RBP14.63□□□□□ -0.07
SH2D3A-206ENST00000597254 DBF4Q9UBU7 674 aaPredicted RBP14.63□□□□□ -0.07
SH2D3A-206ENST00000597254 TNNQ9UQP3 1299 aa14.63□□□□□ -0.07
SH2D3A-206ENST00000597254 C4BP0C0L5 1744 aa14.63□□□□□ -0.07
SH2D3A-206ENST00000597254 COL24A1Q17RW2 1714 aa14.63□□□□□ -0.07
SH2D3A-206ENST00000597254 PHF14O94880 888 aa14.62□□□□□ -0.07
SH2D3A-206ENST00000597254 PDE3AQ14432 1141 aa14.62□□□□□ -0.07
SH2D3A-206ENST00000597254 SLC4A9Q96Q91 983 aa14.62□□□□□ -0.07
SH2D3A-206ENST00000597254 CHPF2Q9P2E5 772 aa14.62□□□□□ -0.07
SH2D3A-206ENST00000597254 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP14.61□□□□□ -0.07
SH2D3A-206ENST00000597254 MS4A1P11836 297 aa14.61□□□□□ -0.07
SH2D3A-206ENST00000597254 TRIM27P14373 513 aa14.61□□□□□ -0.07
SH2D3A-206ENST00000597254 DNAJC10Q8IXB1 793 aa14.61□□□□□ -0.07
SH2D3A-206ENST00000597254 LINC00116Q8NCU8 138 aa14.61□□□□□ -0.07
SH2D3A-206ENST00000597254 DDX21Q9NR30 783 aaKnown RBP eCLIP14.61□□□□□ -0.07
SH2D3A-206ENST00000597254 CACNA1FO60840 1977 aa14.61□□□□□ -0.07
SH2D3A-206ENST00000597254 GNPATO15228 680 aa14.6□□□□□ -0.07
SH2D3A-206ENST00000597254 ANXA1P04083 346 aa14.6□□□□□ -0.07
SH2D3A-206ENST00000597254 SSFA2P28290 1259 aa14.6□□□□□ -0.07
SH2D3A-206ENST00000597254 PDIA6Q15084 440 aa14.6□□□□□ -0.07
SH2D3A-206ENST00000597254 DZIP1LQ8IYY4 767 aaKnown RBP14.6□□□□□ -0.07
SH2D3A-206ENST00000597254 NLGN2Q8NFZ4 835 aa14.6□□□□□ -0.07
SH2D3A-206ENST00000597254 PANK1Q8TE04 598 aa14.6□□□□□ -0.07
SH2D3A-206ENST00000597254 CLUAP1Q96AJ1 413 aa14.6□□□□□ -0.07
SH2D3A-206ENST00000597254 API5Q9BZZ5 524 aaKnown RBP14.6□□□□□ -0.07
SH2D3A-206ENST00000597254 PHAXQ9H814 394 aaKnown RBP14.6□□□□□ -0.07
SH2D3A-206ENST00000597254 PTPRCP08575 1304 aa14.6□□□□□ -0.07
SH2D3A-206ENST00000597254 CHD4Q14839 1912 aa14.59□□□□□ -0.07
SH2D3A-206ENST00000597254 A1BGP04217 495 aa14.59□□□□□ -0.07
SH2D3A-206ENST00000597254 RLBP1P12271 317 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms