RNA–Protein interactions for RNA: ENST00000596676.2

SMCO4-206, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 BASIC

Gene SMCO4, Length 180 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-206ENST00000596676 A1BGP04217 495 aa20.12■□□□□ 0.81
SMCO4-206ENST00000596676 EIF2S2P20042 333 aaKnown RBP20.12■□□□□ 0.81
SMCO4-206ENST00000596676 CRKLP46109 303 aaKnown RBP20.12■□□□□ 0.81
SMCO4-206ENST00000596676 INTS5Q6P9B9 1019 aaKnown RBP20.12■□□□□ 0.81
SMCO4-206ENST00000596676 AKT1S1Q96B36 256 aa20.12■□□□□ 0.81
SMCO4-206ENST00000596676 MYH16Q9H6N6 1097 aa20.12■□□□□ 0.81
SMCO4-206ENST00000596676 COL5A3P25940 1745 aaPredicted RBP20.12■□□□□ 0.81
SMCO4-206ENST00000596676 ZNF831Q5JPB2 1677 aa20.12■□□□□ 0.81
SMCO4-206ENST00000596676 C4BP0C0L5 1744 aa20.1■□□□□ 0.81
SMCO4-206ENST00000596676 TCERG1O14776 1098 aaKnown RBP20.1■□□□□ 0.81
SMCO4-206ENST00000596676 ZBTB1Q9Y2K1 713 aa20.09■□□□□ 0.81
SMCO4-206ENST00000596676 CICQ96RK0 1608 aaPredicted RBP20.09■□□□□ 0.81
SMCO4-206ENST00000596676 NBPF26B4DH59 902 aa20.08■□□□□ 0.81
SMCO4-206ENST00000596676 ANXA1P04083 346 aa20.08■□□□□ 0.81
SMCO4-206ENST00000596676 CANXP27824 592 aaKnown RBP20.08■□□□□ 0.81
SMCO4-206ENST00000596676 TWISTNBQ3B726 338 aaPredicted RBP20.08■□□□□ 0.81
SMCO4-206ENST00000596676 NBPF14Q5TI25 921 aa20.08■□□□□ 0.81
SMCO4-206ENST00000596676 NBPF10Q6P3W6 841 aaKnown RBP20.08■□□□□ 0.81
SMCO4-206ENST00000596676 NBPF15Q8N660 670 aa20.08■□□□□ 0.81
SMCO4-206ENST00000596676 CCDC87Q9NVE4 849 aa20.08■□□□□ 0.81
SMCO4-206ENST00000596676 TUBGCP6Q96RT7 1819 aa20.07■□□□□ 0.8
SMCO4-206ENST00000596676 GNPATO15228 680 aa20.07■□□□□ 0.8
SMCO4-206ENST00000596676 STARD3NLO95772 234 aa20.07■□□□□ 0.8
SMCO4-206ENST00000596676 SLC15A2Q16348 729 aa20.07■□□□□ 0.8
SMCO4-206ENST00000596676 AK7Q96M32 723 aa20.07■□□□□ 0.8
SMCO4-206ENST00000596676 TEX13AQ9BXU3 409 aaPredicted RBP20.07■□□□□ 0.8
SMCO4-206ENST00000596676 PDGFDQ9GZP0 370 aaPredicted RBP20.07■□□□□ 0.8
SMCO4-206ENST00000596676 STK32BQ9NY57 414 aa20.07■□□□□ 0.8
SMCO4-206ENST00000596676 CNTNAP4Q9C0A0 1308 aa20.06■□□□□ 0.8
SMCO4-206ENST00000596676 PSDA5PKW4 1024 aaPredicted RBP20.06■□□□□ 0.8
SMCO4-206ENST00000596676 VAMP4O75379 141 aa20.06■□□□□ 0.8
SMCO4-206ENST00000596676 PHF14O94880 888 aa20.06■□□□□ 0.8
SMCO4-206ENST00000596676 PROSER3Q2NL68 480 aa20.06■□□□□ 0.8
SMCO4-206ENST00000596676 LAMB4A4D0S4 1761 aa20.06■□□□□ 0.8
SMCO4-206ENST00000596676 R3HDM1Q15032 1099 aaKnown RBP20.05■□□□□ 0.8
SMCO4-206ENST00000596676 PDIA6Q15084 440 aa20.05■□□□□ 0.8
SMCO4-206ENST00000596676 RC3H1Q5TC82 1133 aaKnown RBP20.05■□□□□ 0.8
SMCO4-206ENST00000596676 HDGFL1Q5TGJ6 251 aa20.05■□□□□ 0.8
SMCO4-206ENST00000596676 TFCP2L1Q9NZI6 479 aa20.05■□□□□ 0.8
SMCO4-206ENST00000596676 MYL6BP14649 208 aa20.04■□□□□ 0.8
SMCO4-206ENST00000596676 ZNF330Q9Y3S2 320 aaPredicted RBP20.04■□□□□ 0.8
SMCO4-206ENST00000596676 UBR3Q6ZT12 1888 aa20.04■□□□□ 0.8
SMCO4-206ENST00000596676 RPS6KA4O75676 772 aa20.03■□□□□ 0.8
SMCO4-206ENST00000596676 CHPF2Q9P2E5 772 aa20.03■□□□□ 0.8
SMCO4-206ENST00000596676 PNPLA7Q6ZV29 1317 aa20.02■□□□□ 0.8
SMCO4-206ENST00000596676 COL23A1Q86Y22 540 aaPredicted RBP20.02■□□□□ 0.8
SMCO4-206ENST00000596676 SOS1Q07889 1333 aaPredicted RBP20.02■□□□□ 0.79
SMCO4-206ENST00000596676 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.01■□□□□ 0.79
SMCO4-206ENST00000596676 HOXB7P09629 217 aa20.01■□□□□ 0.79
SMCO4-206ENST00000596676 RTCBQ9Y3I0 505 aaKnown RBP20.01■□□□□ 0.79
SMCO4-206ENST00000596676 EIF5P55010 431 aaKnown RBP20■□□□□ 0.79
SMCO4-206ENST00000596676 LRP10Q7Z4F1 713 aa20■□□□□ 0.79
SMCO4-206ENST00000596676 ARHGEF1Q92888 912 aaKnown RBP20■□□□□ 0.79
SMCO4-206ENST00000596676 MSH5O43196 834 aa19.99■□□□□ 0.79
SMCO4-206ENST00000596676 SRP68Q9UHB9 627 aaKnown RBP19.99■□□□□ 0.79
SMCO4-206ENST00000596676 TTLL7Q6ZT98 887 aa19.98■□□□□ 0.79
SMCO4-206ENST00000596676 G2E3Q7L622 706 aa19.98■□□□□ 0.79
SMCO4-206ENST00000596676 ARXQ96QS3 562 aa19.98■□□□□ 0.79
SMCO4-206ENST00000596676 PHAXQ9H814 394 aaKnown RBP19.98■□□□□ 0.79
SMCO4-206ENST00000596676 TBC1D2BQ9UPU7 963 aa19.98■□□□□ 0.79
SMCO4-206ENST00000596676 IL6STP40189 918 aaPredicted RBP19.97■□□□□ 0.79
SMCO4-206ENST00000596676 TRAPPC3LQ5T215 181 aa19.97■□□□□ 0.79
SMCO4-206ENST00000596676 CCDC30Q5VVM6 783 aa19.97■□□□□ 0.79
SMCO4-206ENST00000596676 BCL2L13Q9BXK5 485 aa19.97■□□□□ 0.79
SMCO4-206ENST00000596676 DDX21Q9NR30 783 aaKnown RBP eCLIP19.97■□□□□ 0.79
SMCO4-206ENST00000596676 COL15A1P39059 1388 aa19.96■□□□□ 0.79
SMCO4-206ENST00000596676 SSFA2P28290 1259 aa19.96■□□□□ 0.79
SMCO4-206ENST00000596676 AIMP1Q12904 312 aaKnown RBP19.96■□□□□ 0.79
SMCO4-206ENST00000596676 SLC4A2P04920 1241 aa19.95■□□□□ 0.78
SMCO4-206ENST00000596676 XAGE3Q8WTP9 111 aa19.95■□□□□ 0.78
SMCO4-206ENST00000596676 SSH1Q8WYL5 1049 aa19.95■□□□□ 0.78
SMCO4-206ENST00000596676 DBF4Q9UBU7 674 aaPredicted RBP19.95■□□□□ 0.78
SMCO4-206ENST00000596676 C4AP0C0L4 1744 aa19.94■□□□□ 0.78
SMCO4-206ENST00000596676 COPS6Q7L5N1 327 aa19.94■□□□□ 0.78
SMCO4-206ENST00000596676 ERBB4Q15303 1308 aa19.94■□□□□ 0.78
SMCO4-206ENST00000596676 QSER1Q2KHR3 1735 aa19.93■□□□□ 0.78
SMCO4-206ENST00000596676 RFC4P35249 363 aa19.93■□□□□ 0.78
SMCO4-206ENST00000596676 USPL1Q5W0Q7 1092 aa19.93■□□□□ 0.78
SMCO4-206ENST00000596676 MSL1Q68DK7 614 aa19.93■□□□□ 0.78
SMCO4-206ENST00000596676 DZIP3Q86Y13 1208 aaKnown RBP19.93■□□□□ 0.78
SMCO4-206ENST00000596676 MRPL50Q8N5N7 158 aaKnown RBP19.92■□□□□ 0.78
SMCO4-206ENST00000596676 STK31Q9BXU1 1019 aa19.92■□□□□ 0.78
SMCO4-206ENST00000596676 ZBTB3Q9H5J0 574 aa19.92■□□□□ 0.78
SMCO4-206ENST00000596676 BCL2L12Q9HB09 334 aa19.92■□□□□ 0.78
SMCO4-206ENST00000596676 CASZ1Q86V15 1759 aa19.91■□□□□ 0.78
SMCO4-206ENST00000596676 CAMTA2O94983 1202 aa19.91■□□□□ 0.78
SMCO4-206ENST00000596676 ZBTB7AO95365 584 aa19.91■□□□□ 0.78
SMCO4-206ENST00000596676 HMGB2P26583 209 aaKnown RBP19.91■□□□□ 0.78
SMCO4-206ENST00000596676 RARSP54136 660 aaKnown RBP19.91■□□□□ 0.78
SMCO4-206ENST00000596676 HLFQ16534 295 aa19.91■□□□□ 0.78
SMCO4-206ENST00000596676 HYPKQ9NX55 129 aa19.91■□□□□ 0.78
SMCO4-206ENST00000596676 BCAR3O75815 825 aa19.9■□□□□ 0.78
SMCO4-206ENST00000596676 GYS1P13807 737 aa19.9■□□□□ 0.78
SMCO4-206ENST00000596676 ADRA2BP18089 450 aa19.9■□□□□ 0.78
SMCO4-206ENST00000596676 FLAD1Q8NFF5 587 aa19.9■□□□□ 0.78
SMCO4-206ENST00000596676 NARFQ9UHQ1 456 aa19.9■□□□□ 0.78
SMCO4-206ENST00000596676 USP42Q9H9J4 1324 aaKnown RBP19.9■□□□□ 0.78
SMCO4-206ENST00000596676 A0A087WZG4 1122 aa19.89■□□□□ 0.77
SMCO4-206ENST00000596676 FKBP8Q14318 412 aa19.89■□□□□ 0.77
SMCO4-206ENST00000596676 SMC4Q9NTJ3 1288 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms