RNA–Protein interactions for RNA: ENST00000595101.5

USE1-206, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 2 BASIC

Gene USE1, Length 1,776 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-206ENST00000595101 LMOD3Q0VAK6 560 aa20.19■□□□□ 0.82
USE1-206ENST00000595101 QSER1Q2KHR3 1735 aa20.19■□□□□ 0.82
USE1-206ENST00000595101 A1BGP04217 495 aa20.18■□□□□ 0.82
USE1-206ENST00000595101 CANXP27824 592 aaKnown RBP20.18■□□□□ 0.82
USE1-206ENST00000595101 EIF4A1P60842 406 aaKnown RBP20.18■□□□□ 0.82
USE1-206ENST00000595101 DIEXFQ68CQ4 756 aaKnown RBP20.18■□□□□ 0.82
USE1-206ENST00000595101 SRP68Q9UHB9 627 aaKnown RBP20.18■□□□□ 0.82
USE1-206ENST00000595101 TSPYL4Q9UJ04 414 aa20.18■□□□□ 0.82
USE1-206ENST00000595101 LAS1LQ9Y4W2 734 aaKnown RBP20.18■□□□□ 0.82
USE1-206ENST00000595101 PELP1Q8IZL8 1130 aaKnown RBP20.17■□□□□ 0.82
USE1-206ENST00000595101 CICQ96RK0 1608 aaPredicted RBP20.17■□□□□ 0.82
USE1-206ENST00000595101 STARD3NLO95772 234 aa20.16■□□□□ 0.82
USE1-206ENST00000595101 SNRPA1P09661 255 aaKnown RBP20.16■□□□□ 0.82
USE1-206ENST00000595101 PPP1R1BQ9UD71 204 aaPredicted RBP20.16■□□□□ 0.82
USE1-206ENST00000595101 SALL2Q9Y467 1007 aaPredicted RBP20.16■□□□□ 0.82
USE1-206ENST00000595101 SOS1Q07889 1333 aaPredicted RBP20.16■□□□□ 0.82
USE1-206ENST00000595101 RFC4P35249 363 aa20.15■□□□□ 0.82
USE1-206ENST00000595101 UTRNP46939 3433 aa20.15■□□□□ 0.82
USE1-206ENST00000595101 GOLGB1Q14789 3259 aaKnown RBP20.15■□□□□ 0.82
USE1-206ENST00000595101 KRT24Q2M2I5 525 aa20.15■□□□□ 0.82
USE1-206ENST00000595101 CHL1O00533 1208 aa20.14■□□□□ 0.81
USE1-206ENST00000595101 GIGYF1O75420 1035 aaPredicted RBP20.14■□□□□ 0.81
USE1-206ENST00000595101 TEX13AQ9BXU3 409 aaPredicted RBP20.14■□□□□ 0.81
USE1-206ENST00000595101 GYS1P13807 737 aa20.13■□□□□ 0.81
USE1-206ENST00000595101 ADRA2BP18089 450 aa20.13■□□□□ 0.81
USE1-206ENST00000595101 MIER1Q8N108 512 aa20.13■□□□□ 0.81
USE1-206ENST00000595101 ARXQ96QS3 562 aa20.13■□□□□ 0.81
USE1-206ENST00000595101 ZNF330Q9Y3S2 320 aaPredicted RBP20.13■□□□□ 0.81
USE1-206ENST00000595101 FHDC1Q9C0D6 1143 aaPredicted RBP20.12■□□□□ 0.81
USE1-206ENST00000595101 NBPF26B4DH59 902 aa20.11■□□□□ 0.81
USE1-206ENST00000595101 POLD1P28340 1107 aa20.11■□□□□ 0.81
USE1-206ENST00000595101 EIF5P55010 431 aaKnown RBP20.11■□□□□ 0.81
USE1-206ENST00000595101 NBPF10Q6P3W6 841 aaKnown RBP20.11■□□□□ 0.81
USE1-206ENST00000595101 NBPF15Q8N660 670 aa20.11■□□□□ 0.81
USE1-206ENST00000595101 KDM3BQ7LBC6 1761 aa20.11■□□□□ 0.81
USE1-206ENST00000595101 COL15A1P39059 1388 aa20.11■□□□□ 0.81
USE1-206ENST00000595101 USP42Q9H9J4 1324 aaKnown RBP20.1■□□□□ 0.81
USE1-206ENST00000595101 ZNF853P0CG23 659 aa20.1■□□□□ 0.81
USE1-206ENST00000595101 FKBP8Q14318 412 aa20.1■□□□□ 0.81
USE1-206ENST00000595101 USPL1Q5W0Q7 1092 aa20.1■□□□□ 0.81
USE1-206ENST00000595101 WWC1Q8IX03 1113 aa20.1■□□□□ 0.81
USE1-206ENST00000595101 CFAP44Q96MT7 982 aa20.1■□□□□ 0.81
USE1-206ENST00000595101 MBIPQ9NS73 344 aa20.1■□□□□ 0.81
USE1-206ENST00000595101 BABAM1Q9NWV8 329 aa20.09■□□□□ 0.81
USE1-206ENST00000595101 TBC1D2BQ9UPU7 963 aa20.09■□□□□ 0.81
USE1-206ENST00000595101 KLHL34Q8N239 644 aa20.08■□□□□ 0.81
USE1-206ENST00000595101 BCL2L12Q9HB09 334 aa20.08■□□□□ 0.81
USE1-206ENST00000595101 MMP10P09238 476 aa20.08■□□□□ 0.8
USE1-206ENST00000595101 SYT17Q9BSW7 474 aa20.08■□□□□ 0.8
USE1-206ENST00000595101 IL6STP40189 918 aaPredicted RBP20.07■□□□□ 0.8
USE1-206ENST00000595101 NECTIN2Q92692 538 aa20.07■□□□□ 0.8
USE1-206ENST00000595101 C4AP0C0L4 1744 aa20.07■□□□□ 0.8
USE1-206ENST00000595101 CCER2I3L3R5 266 aa20.06■□□□□ 0.8
USE1-206ENST00000595101 ZPR1O75312 459 aa20.06■□□□□ 0.8
USE1-206ENST00000595101 EIF2S2P20042 333 aaKnown RBP20.06■□□□□ 0.8
USE1-206ENST00000595101 CCDC27Q2M243 656 aa20.06■□□□□ 0.8
USE1-206ENST00000595101 NARFQ9UHQ1 456 aa20.06■□□□□ 0.8
USE1-206ENST00000595101 COL24A1Q17RW2 1714 aa20.06■□□□□ 0.8
USE1-206ENST00000595101 NLGN1Q8N2Q7 840 aa20.06■□□□□ 0.8
USE1-206ENST00000595101 IFT57Q9NWB7 429 aa20.06■□□□□ 0.8
USE1-206ENST00000595101 NGEFQ8N5V2 710 aa20.05■□□□□ 0.8
USE1-206ENST00000595101 TSR2Q969E8 191 aaKnown RBP20.05■□□□□ 0.8
USE1-206ENST00000595101 ANXA1P04083 346 aa20.03■□□□□ 0.8
USE1-206ENST00000595101 MYL6BP14649 208 aa20.03■□□□□ 0.8
USE1-206ENST00000595101 DDR1Q08345 913 aa20.03■□□□□ 0.8
USE1-206ENST00000595101 NLGN2Q8NFZ4 835 aa20.03■□□□□ 0.8
USE1-206ENST00000595101 ELL2O00472 640 aaPredicted RBP20.03■□□□□ 0.8
USE1-206ENST00000595101 GNAI1P63096 354 aa20.03■□□□□ 0.8
USE1-206ENST00000595101 PDIA6Q15084 440 aa20.03■□□□□ 0.8
USE1-206ENST00000595101 PROSER3Q2NL68 480 aa20.03■□□□□ 0.8
USE1-206ENST00000595101 SPINK5Q9NQ38 1064 aaPredicted RBP20.03■□□□□ 0.8
USE1-206ENST00000595101 CAMTA2O94983 1202 aa20.02■□□□□ 0.8
USE1-206ENST00000595101 DZIP3Q86Y13 1208 aaKnown RBP20.02■□□□□ 0.8
USE1-206ENST00000595101 TM4SF1P30408 202 aa20.01■□□□□ 0.79
USE1-206ENST00000595101 CALD1Q05682 793 aaKnown RBP20.01■□□□□ 0.79
USE1-206ENST00000595101 NFIXQ14938 502 aa20.01■□□□□ 0.79
USE1-206ENST00000595101 BICDL1Q6ZP65 573 aa20.01■□□□□ 0.79
USE1-206ENST00000595101 A0A087WZG4 1122 aa20■□□□□ 0.79
USE1-206ENST00000595101 DUSP27Q5VZP5 1158 aa20■□□□□ 0.79
USE1-206ENST00000595101 C8orf58Q8NAV2 365 aa20■□□□□ 0.79
USE1-206ENST00000595101 TBC1D9BQ66K14 1250 aa20■□□□□ 0.79
USE1-206ENST00000595101 TTLL7Q6ZT98 887 aa20■□□□□ 0.79
USE1-206ENST00000595101 LRP10Q7Z4F1 713 aa20■□□□□ 0.79
USE1-206ENST00000595101 TSPYL6Q8N831 410 aa20■□□□□ 0.79
USE1-206ENST00000595101 POLRMTO00411 1230 aaKnown RBP19.99■□□□□ 0.79
USE1-206ENST00000595101 NCBP3Q53F19 620 aaKnown RBP19.99■□□□□ 0.79
USE1-206ENST00000595101 HLFQ16534 295 aa19.98■□□□□ 0.79
USE1-206ENST00000595101 NPM2Q86SE8 214 aaKnown RBP19.98■□□□□ 0.79
USE1-206ENST00000595101 PARP3Q9Y6F1 533 aa19.98■□□□□ 0.79
USE1-206ENST00000595101 LAMB4A4D0S4 1761 aa19.97■□□□□ 0.79
USE1-206ENST00000595101 HDGFL1Q5TGJ6 251 aa19.96■□□□□ 0.79
USE1-206ENST00000595101 WDR63Q8IWG1 891 aa19.96■□□□□ 0.79
USE1-206ENST00000595101 CHPF2Q9P2E5 772 aa19.96■□□□□ 0.79
USE1-206ENST00000595101 WWC3Q9ULE0 1092 aa19.96■□□□□ 0.79
USE1-206ENST00000595101 IL16Q14005 1332 aa19.95■□□□□ 0.78
USE1-206ENST00000595101 ZNF521Q96K83 1311 aa19.95■□□□□ 0.78
USE1-206ENST00000595101 CD2APQ9Y5K6 639 aa19.95■□□□□ 0.78
USE1-206ENST00000595101 FANCIQ9NVI1 1328 aa19.94■□□□□ 0.78
USE1-206ENST00000595101 CCDC24Q8N4L8 307 aa19.94■□□□□ 0.78
USE1-206ENST00000595101 ZBTB3Q9H5J0 574 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms