RNA–Protein interactions for RNA: ENST00000592338.5

CNN1-209, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 525 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-209ENST00000592338 BCORQ6W2J9 1755 aa21.4■■□□□ 1.02
CNN1-209ENST00000592338 BRCA1P38398 1863 aaKnown RBP21.39■■□□□ 1.02
CNN1-209ENST00000592338 COL15A1P39059 1388 aa21.39■■□□□ 1.02
CNN1-209ENST00000592338 USP42Q9H9J4 1324 aaKnown RBP21.39■■□□□ 1.01
CNN1-209ENST00000592338 HTATSF1O43719 755 aaKnown RBP21.39■■□□□ 1.01
CNN1-209ENST00000592338 FMNL2Q96PY5 1086 aa21.38■■□□□ 1.01
CNN1-209ENST00000592338 PELP1Q8IZL8 1130 aaKnown RBP21.37■■□□□ 1.01
CNN1-209ENST00000592338 THUMPD2Q9BTF0 503 aaKnown RBP21.37■■□□□ 1.01
CNN1-209ENST00000592338 CANXP27824 592 aaKnown RBP21.36■■□□□ 1.01
CNN1-209ENST00000592338 CCDC146Q8IYE0 955 aa21.36■■□□□ 1.01
CNN1-209ENST00000592338 NLGN1Q8N2Q7 840 aa21.36■■□□□ 1.01
CNN1-209ENST00000592338 PNNQ9H307 717 aaKnown RBP21.36■■□□□ 1.01
CNN1-209ENST00000592338 PRAMEF22A3QJZ6 481 aa21.35■■□□□ 1.01
CNN1-209ENST00000592338 ZNF316A6NFI3 1004 aaPredicted RBP21.35■■□□□ 1.01
CNN1-209ENST00000592338 FKBP8Q14318 412 aa21.35■■□□□ 1.01
CNN1-209ENST00000592338 MIS18AQ9NYP9 233 aa21.35■■□□□ 1.01
CNN1-209ENST00000592338 CD2APQ9Y5K6 639 aa21.35■■□□□ 1.01
CNN1-209ENST00000592338 GOLGB1Q14789 3259 aaKnown RBP21.35■■□□□ 1.01
CNN1-209ENST00000592338 UTRNP46939 3433 aa21.34■■□□□ 1.01
CNN1-209ENST00000592338 STARD3NLO95772 234 aa21.34■■□□□ 1.01
CNN1-209ENST00000592338 GPR162Q16538 588 aa21.34■■□□□ 1.01
CNN1-209ENST00000592338 USPL1Q5W0Q7 1092 aa21.34■■□□□ 1.01
CNN1-209ENST00000592338 C10orf71Q711Q0 1435 aa21.34■■□□□ 1.01
CNN1-209ENST00000592338 NRXN2Q9P2S2 1712 aa21.34■■□□□ 1.01
CNN1-209ENST00000592338 WDR43Q15061 677 aaKnown RBP eCLIP21.33■■□□□ 1.01
CNN1-209ENST00000592338 TAF7Q15545 349 aaPredicted RBP21.32■■□□□ 1
CNN1-209ENST00000592338 PXDNLA1KZ92 1463 aa21.32■■□□□ 1
CNN1-209ENST00000592338 ZPR1O75312 459 aa21.31■■□□□ 1
CNN1-209ENST00000592338 A1BGP04217 495 aa21.31■■□□□ 1
CNN1-209ENST00000592338 YBX3P16989 372 aaKnown RBP eCLIP21.31■■□□□ 19e-6■■■□□ 18.6
CNN1-209ENST00000592338 EIF5P55010 431 aaKnown RBP21.31■■□□□ 1
CNN1-209ENST00000592338 DDR1Q08345 913 aa21.31■■□□□ 1
CNN1-209ENST00000592338 TEX13AQ9BXU3 409 aaPredicted RBP21.31■■□□□ 1
CNN1-209ENST00000592338 NARFQ9UHQ1 456 aa21.31■■□□□ 1
CNN1-209ENST00000592338 WWC3Q9ULE0 1092 aa21.31■■□□□ 1
CNN1-209ENST00000592338 RRP7AQ9Y3A4 280 aaKnown RBP21.31■■□□□ 1
CNN1-209ENST00000592338 ZNF330Q9Y3S2 320 aaPredicted RBP21.31■■□□□ 1
CNN1-209ENST00000592338 USP16Q9Y5T5 823 aa21.31■■□□□ 1
CNN1-209ENST00000592338 YY1P25490 414 aa21.3■■□□□ 1
CNN1-209ENST00000592338 TMPOP42166 694 aaKnown RBP21.3■■□□□ 1
CNN1-209ENST00000592338 PIP4K2AP48426 406 aaPredicted RBP21.3■■□□□ 1
CNN1-209ENST00000592338 RIPK4P57078 832 aa21.3■■□□□ 1
CNN1-209ENST00000592338 ADAMTS8Q9UP79 889 aa21.3■■□□□ 1
CNN1-209ENST00000592338 PARP3Q9Y6F1 533 aa21.3■■□□□ 1
CNN1-209ENST00000592338 ANKRD31Q8N7Z5 1873 aa21.29■■□□□ 1
CNN1-209ENST00000592338 BCL2L12Q9HB09 334 aa21.29■■□□□ 1
CNN1-209ENST00000592338 DLEC1Q9Y238 1755 aa21.28■■□□□ 1
CNN1-209ENST00000592338 ARFGEF1Q9Y6D6 1849 aa21.28■■□□□ 1
CNN1-209ENST00000592338 NUP98P52948 1817 aa21.27■■□□□ 1
CNN1-209ENST00000592338 SNRPA1P09661 255 aaKnown RBP21.27■■□□□ 1
CNN1-209ENST00000592338 NEUROD2Q15784 382 aa21.27■■□□□ 1
CNN1-209ENST00000592338 POLRMTO00411 1230 aaKnown RBP21.26■□□□□ 0.99
CNN1-209ENST00000592338 TM4SF1P30408 202 aa21.26■□□□□ 0.99
CNN1-209ENST00000592338 IL6STP40189 918 aaPredicted RBP21.26■□□□□ 0.99
CNN1-209ENST00000592338 CCDC184Q52MB2 194 aa21.26■□□□□ 0.99
CNN1-209ENST00000592338 RUNDC1Q96C34 613 aa21.26■□□□□ 0.99
CNN1-209ENST00000592338 CACNA1SQ13698 1873 aa21.25■□□□□ 0.99
CNN1-209ENST00000592338 NFIXQ14938 502 aa21.25■□□□□ 0.99
CNN1-209ENST00000592338 PNISRQ8TF01 805 aaKnown RBP21.25■□□□□ 0.99
CNN1-209ENST00000592338 TBC1D2BQ9UPU7 963 aa21.25■□□□□ 0.99
CNN1-209ENST00000592338 A0A087WZG4 1122 aa21.24■□□□□ 0.99
CNN1-209ENST00000592338 EIF4A1P60842 406 aaKnown RBP21.23■□□□□ 0.99
CNN1-209ENST00000592338 COL11A2P13942 1736 aaPredicted RBP21.23■□□□□ 0.99
CNN1-209ENST00000592338 A0A0G2JLW4 131 aa21.22■□□□□ 0.99
CNN1-209ENST00000592338 NBPF26B4DH59 902 aa21.22■□□□□ 0.99
CNN1-209ENST00000592338 LMOD3Q0VAK6 560 aa21.22■□□□□ 0.99
CNN1-209ENST00000592338 NBPF10Q6P3W6 841 aaKnown RBP21.22■□□□□ 0.99
CNN1-209ENST00000592338 BICDL1Q6ZP65 573 aa21.22■□□□□ 0.99
CNN1-209ENST00000592338 NBPF15Q8N660 670 aa21.22■□□□□ 0.99
CNN1-209ENST00000592338 DPEP1P16444 411 aa21.21■□□□□ 0.99
CNN1-209ENST00000592338 TSPYL4Q9UJ04 414 aa21.21■□□□□ 0.99
CNN1-209ENST00000592338 TRIM35Q9UPQ4 493 aa21.21■□□□□ 0.99
CNN1-209ENST00000592338 GIGYF1O75420 1035 aaPredicted RBP21.2■□□□□ 0.98
CNN1-209ENST00000592338 CAMTA2O94983 1202 aa21.2■□□□□ 0.98
CNN1-209ENST00000592338 TBC1D9BQ66K14 1250 aa21.2■□□□□ 0.98
CNN1-209ENST00000592338 DZIP3Q86Y13 1208 aaKnown RBP21.2■□□□□ 0.98
CNN1-209ENST00000592338 CARMIL3Q8ND23 1372 aa21.2■□□□□ 0.98
CNN1-209ENST00000592338 TGFB2P61812 414 aa21.19■□□□□ 0.98
CNN1-209ENST00000592338 GRIN3BO60391 1043 aa21.18■□□□□ 0.98
CNN1-209ENST00000592338 SERPINB2P05120 415 aa21.18■□□□□ 0.98
CNN1-209ENST00000592338 NPM2Q86SE8 214 aaKnown RBP21.18■□□□□ 0.98
CNN1-209ENST00000592338 APAF1O14727 1248 aa21.16■□□□□ 0.98
CNN1-209ENST00000592338 ANP32CO43423 234 aa21.16■□□□□ 0.98
CNN1-209ENST00000592338 KCNA3P22001 575 aa21.16■□□□□ 0.98
CNN1-209ENST00000592338 CHRNA5P30532 468 aa21.16■□□□□ 0.98
CNN1-209ENST00000592338 CCDC88AQ3V6T2 1871 aa21.15■□□□□ 0.98
CNN1-209ENST00000592338 ANKRD36CQ5JPF3 1778 aa21.15■□□□□ 0.98
CNN1-209ENST00000592338 LAS1LQ9Y4W2 734 aaKnown RBP21.15■□□□□ 0.98
CNN1-209ENST00000592338 SBF1O95248 1867 aa21.15■□□□□ 0.98
CNN1-209ENST00000592338 NGEFQ8N5V2 710 aa21.14■□□□□ 0.97
CNN1-209ENST00000592338 BCS1LQ9Y276 419 aa21.14■□□□□ 0.97
CNN1-209ENST00000592338 ARFGEF2Q9Y6D5 1785 aa21.13■□□□□ 0.97
CNN1-209ENST00000592338 SENP3-EIF4A1A0A087X0R7 540 aa21.13■□□□□ 0.97
CNN1-209ENST00000592338 CCDC24Q8N4L8 307 aa21.13■□□□□ 0.97
CNN1-209ENST00000592338 BABAM1Q9NWV8 329 aa21.13■□□□□ 0.97
CNN1-209ENST00000592338 MYL6BP14649 208 aa21.12■□□□□ 0.97
CNN1-209ENST00000592338 KRT24Q2M2I5 525 aa21.12■□□□□ 0.97
CNN1-209ENST00000592338 ZNF784Q8NCA9 323 aaPredicted RBP21.12■□□□□ 0.97
CNN1-209ENST00000592338 MRS2Q9HD23 443 aa21.12■□□□□ 0.97
CNN1-209ENST00000592338 CHL1O00533 1208 aa21.11■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms