RNA–Protein interactions for RNA: ENST00000592250.5

SDF2-210, Transcript of stromal cell derived factor 2, humanhuman

TSL 2

Gene SDF2, Length 1,025 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-210ENST00000592250 GJD4Q96KN9 370 aaPredicted RBP10.43□□□□□ -0.74
SDF2-210ENST00000592250 CCDC9Q9Y3X0 531 aaKnown RBP10.43□□□□□ -0.74
SDF2-210ENST00000592250 EMILIN1Q9Y6C2 1016 aa10.43□□□□□ -0.74
SDF2-210ENST00000592250 PEAK1Q9H792 1746 aa10.43□□□□□ -0.74
SDF2-210ENST00000592250 ABCC6O95255 1503 aa10.43□□□□□ -0.74
SDF2-210ENST00000592250 NRAPQ86VF7 1730 aa10.42□□□□□ -0.74
SDF2-210ENST00000592250 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.42□□□□□ -0.74
SDF2-210ENST00000592250 CAMTA1Q9Y6Y1 1673 aa10.42□□□□□ -0.74
SDF2-210ENST00000592250 A0A0G2JS52 829 aa10.42□□□□□ -0.74
SDF2-210ENST00000592250 MYT1Q01538 1121 aa10.42□□□□□ -0.74
SDF2-210ENST00000592250 CFAP53Q96M91 514 aa10.42□□□□□ -0.74
SDF2-210ENST00000592250 PRDM11Q9NQV5 511 aa10.42□□□□□ -0.74
SDF2-210ENST00000592250 LTN1O94822 1766 aa10.42□□□□□ -0.74
SDF2-210ENST00000592250 IL13P35225 146 aa10.41□□□□□ -0.74
SDF2-210ENST00000592250 RRS1Q15050 365 aaKnown RBP10.41□□□□□ -0.74
SDF2-210ENST00000592250 WDR43Q15061 677 aaKnown RBP eCLIP10.41□□□□□ -0.74
SDF2-210ENST00000592250 CHRNA2Q15822 529 aa10.41□□□□□ -0.74
SDF2-210ENST00000592250 BTG4Q9NY30 223 aa10.41□□□□□ -0.74
SDF2-210ENST00000592250 KIF24Q5T7B8 1368 aa10.4□□□□□ -0.74
SDF2-210ENST00000592250 MAP3K19Q56UN5 1328 aa10.4□□□□□ -0.74
SDF2-210ENST00000592250 ZNF521Q96K83 1311 aa10.4□□□□□ -0.74
SDF2-210ENST00000592250 UNC5CLQ8IV45 518 aa10.4□□□□□ -0.74
SDF2-210ENST00000592250 PLEKHF1Q96S99 279 aa10.4□□□□□ -0.74
SDF2-210ENST00000592250 COL5A2P05997 1499 aaPredicted RBP10.4□□□□□ -0.74
SDF2-210ENST00000592250 DIAPH1O60610 1272 aaKnown RBP10.39□□□□□ -0.75
SDF2-210ENST00000592250 SEPT12Q8IYM1 358 aa10.39□□□□□ -0.75
SDF2-210ENST00000592250 CDHR5Q9HBB8 845 aa10.39□□□□□ -0.75
SDF2-210ENST00000592250 RABGEF1Q9UJ41 708 aa10.39□□□□□ -0.75
SDF2-210ENST00000592250 RTL1A6NKG5 1358 aa10.39□□□□□ -0.75
SDF2-210ENST00000592250 RGPD1P0DJD0 1748 aa10.38□□□□□ -0.75
SDF2-210ENST00000592250 IP6K1Q92551 441 aa10.38□□□□□ -0.75
SDF2-210ENST00000592250 KIAA1468Q9P260 1216 aa10.38□□□□□ -0.75
SDF2-210ENST00000592250 HOXC9P31274 260 aa10.37□□□□□ -0.75
SDF2-210ENST00000592250 VPS72Q15906 364 aa10.37□□□□□ -0.75
SDF2-210ENST00000592250 NGEFQ8N5V2 710 aa10.37□□□□□ -0.75
SDF2-210ENST00000592250 RUNDC1Q96C34 613 aa10.37□□□□□ -0.75
SDF2-210ENST00000592250 NUDCQ9Y266 331 aa10.37□□□□□ -0.75
SDF2-210ENST00000592250 FLT4P35916 1363 aa10.37□□□□□ -0.75
SDF2-210ENST00000592250 RGPD5Q99666 1765 aa10.37□□□□□ -0.75
SDF2-210ENST00000592250 GLI3P10071 1580 aa10.36□□□□□ -0.75
SDF2-210ENST00000592250 ZBTB7CA1YPR0 619 aa10.36□□□□□ -0.75
SDF2-210ENST00000592250 TRIM6-TRIM34B2RNG4 842 aa10.36□□□□□ -0.75
SDF2-210ENST00000592250 APAF1O14727 1248 aa10.36□□□□□ -0.75
SDF2-210ENST00000592250 FCHSD2O94868 740 aa10.36□□□□□ -0.75
SDF2-210ENST00000592250 EIF4A2Q14240 407 aaKnown RBP10.36□□□□□ -0.75
SDF2-210ENST00000592250 HSP90AB2PQ58FF8 381 aa10.36□□□□□ -0.75
SDF2-210ENST00000592250 CCDC146Q8IYE0 955 aa10.36□□□□□ -0.75
SDF2-210ENST00000592250 MRPL50Q8N5N7 158 aaKnown RBP10.36□□□□□ -0.75
SDF2-210ENST00000592250 RSPH6AQ9H0K4 717 aa10.36□□□□□ -0.75
SDF2-210ENST00000592250 EP400Q96L91 3159 aa10.35□□□□□ -0.75
SDF2-210ENST00000592250 ONECUT3O60422 494 aaPredicted RBP10.35□□□□□ -0.75
SDF2-210ENST00000592250 U2AF1L5P0DN76 240 aaPredicted RBP10.35□□□□□ -0.75
SDF2-210ENST00000592250 U2AF1Q01081 240 aaKnown RBP eCLIP10.35□□□□□ -0.75
SDF2-210ENST00000592250 PDE3BQ13370 1112 aa10.35□□□□□ -0.75
SDF2-210ENST00000592250 LARP1Q6PKG0 1096 aaKnown RBP10.35□□□□□ -0.75
SDF2-210ENST00000592250 KRT27Q7Z3Y8 459 aa10.35□□□□□ -0.75
SDF2-210ENST00000592250 TSKSQ9UJT2 592 aa10.35□□□□□ -0.75
SDF2-210ENST00000592250 SPATA31A5Q5VU36 1347 aa10.34□□□□□ -0.75
SDF2-210ENST00000592250 SPATA31A7Q8IWB4 1347 aa10.34□□□□□ -0.75
SDF2-210ENST00000592250 WDR17Q8IZU2 1322 aa10.34□□□□□ -0.75
SDF2-210ENST00000592250 CRB1P82279 1406 aa10.34□□□□□ -0.75
SDF2-210ENST00000592250 SENP3-EIF4A1A0A087X0R7 540 aa10.34□□□□□ -0.75
SDF2-210ENST00000592250 PPM1GO15355 546 aaPredicted RBP10.34□□□□□ -0.75
SDF2-210ENST00000592250 BAG6P46379 1132 aa10.34□□□□□ -0.75
SDF2-210ENST00000592250 AMPHP49418 695 aa10.34□□□□□ -0.75
SDF2-210ENST00000592250 EVA1CP58658 441 aa10.34□□□□□ -0.75
SDF2-210ENST00000592250 CCDC27Q2M243 656 aa10.34□□□□□ -0.75
SDF2-210ENST00000592250 TRMT2AQ8IZ69 625 aaKnown RBP10.34□□□□□ -0.75
SDF2-210ENST00000592250 TCP11L2Q8N4U5 519 aa10.34□□□□□ -0.75
SDF2-210ENST00000592250 KCTD12Q96CX2 325 aaKnown RBP10.34□□□□□ -0.75
SDF2-210ENST00000592250 CDCA7LQ96GN5 454 aa10.34□□□□□ -0.75
SDF2-210ENST00000592250 NBPF3Q9H094 633 aa10.34□□□□□ -0.75
SDF2-210ENST00000592250 NPDC1Q9NQX5 325 aaPredicted RBP10.34□□□□□ -0.75
SDF2-210ENST00000592250 STRN4Q9NRL3 753 aa10.34□□□□□ -0.75
SDF2-210ENST00000592250 SPATA31A1Q5TZJ5 1347 aa10.33□□□□□ -0.76
SDF2-210ENST00000592250 TESPA1A2RU30 521 aaPredicted RBP10.33□□□□□ -0.76
SDF2-210ENST00000592250 U2SURPO15042 1029 aaKnown RBP10.33□□□□□ -0.76
SDF2-210ENST00000592250 PRSS12P56730 875 aa10.33□□□□□ -0.76
SDF2-210ENST00000592250 R3HDM1Q15032 1099 aaKnown RBP10.33□□□□□ -0.76
SDF2-210ENST00000592250 ANKRD24Q8TF21 1146 aa10.33□□□□□ -0.76
SDF2-210ENST00000592250 FAM198AQ9UFP1 575 aa10.33□□□□□ -0.76
SDF2-210ENST00000592250 KDRP35968 1356 aa10.33□□□□□ -0.76
SDF2-210ENST00000592250 FAM208AQ9UK61 1670 aaKnown RBP10.33□□□□□ -0.76
SDF2-210ENST00000592250 IGSF1Q8N6C5 1336 aa10.33□□□□□ -0.76
SDF2-210ENST00000592250 FAM182BQ5T319 152 aa10.32□□□□□ -0.76
SDF2-210ENST00000592250 CARD10Q9BWT7 1032 aa10.32□□□□□ -0.76
SDF2-210ENST00000592250 LRP5O75197 1615 aa10.32□□□□□ -0.76
SDF2-210ENST00000592250 NCAPD2Q15021 1401 aa10.32□□□□□ -0.76
SDF2-210ENST00000592250 GOLGA8CPA6NN73 597 aa10.31□□□□□ -0.76
SDF2-210ENST00000592250 TMPOP42166 694 aaKnown RBP10.31□□□□□ -0.76
SDF2-210ENST00000592250 FAM98CQ17RN3 349 aaKnown RBP10.31□□□□□ -0.76
SDF2-210ENST00000592250 TOM1L2Q6ZVM7 507 aa10.31□□□□□ -0.76
SDF2-210ENST00000592250 WWC1Q8IX03 1113 aa10.31□□□□□ -0.76
SDF2-210ENST00000592250 PHACTR3Q96KR7 559 aa10.31□□□□□ -0.76
SDF2-210ENST00000592250 EYA1Q99502 592 aa10.31□□□□□ -0.76
SDF2-210ENST00000592250 PNNQ9H307 717 aaKnown RBP10.31□□□□□ -0.76
SDF2-210ENST00000592250 THRAP3Q9Y2W1 955 aaKnown RBP10.31□□□□□ -0.76
SDF2-210ENST00000592250 BRWD3Q6RI45 1802 aa10.3□□□□□ -0.76
SDF2-210ENST00000592250 PRKAR2BP31323 418 aa10.3□□□□□ -0.76
SDF2-210ENST00000592250 SLFN5Q08AF3 891 aa10.3□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms