RNA–Protein interactions for RNA: ENST00000591622.1

CIRBP-233, Transcript of cold inducible RNA binding protein, humanhuman

TSL 4

Gene CIRBP, Length 548 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-233ENST00000591622 TMPOP42166 694 aaKnown RBP21.63■■□□□ 1.05
CIRBP-233ENST00000591622 THUMPD2Q9BTF0 503 aaKnown RBP21.63■■□□□ 1.05
CIRBP-233ENST00000591622 USP42Q9H9J4 1324 aaKnown RBP21.62■■□□□ 1.05
CIRBP-233ENST00000591622 PNISRQ8TF01 805 aaKnown RBP21.62■■□□□ 1.05
CIRBP-233ENST00000591622 MIS18AQ9NYP9 233 aa21.62■■□□□ 1.05
CIRBP-233ENST00000591622 MMP10P09238 476 aa21.61■■□□□ 1.05
CIRBP-233ENST00000591622 CANXP27824 592 aaKnown RBP21.61■■□□□ 1.05
CIRBP-233ENST00000591622 SRP68Q9UHB9 627 aaKnown RBP21.61■■□□□ 1.05
CIRBP-233ENST00000591622 CD2APQ9Y5K6 639 aa21.61■■□□□ 1.05
CIRBP-233ENST00000591622 DLG5Q8TDM6 1919 aa21.61■■□□□ 1.05
CIRBP-233ENST00000591622 ANP32CO43423 234 aa21.6■■□□□ 1.05
CIRBP-233ENST00000591622 SNRPA1P09661 255 aaKnown RBP21.6■■□□□ 1.05
CIRBP-233ENST00000591622 LMOD3Q0VAK6 560 aa21.6■■□□□ 1.05
CIRBP-233ENST00000591622 NLGN2Q8NFZ4 835 aa21.6■■□□□ 1.05
CIRBP-233ENST00000591622 COL15A1P39059 1388 aa21.6■■□□□ 1.05
CIRBP-233ENST00000591622 C4AP0C0L4 1744 aa21.59■■□□□ 1.05
CIRBP-233ENST00000591622 RRP7AQ9Y3A4 280 aaKnown RBP21.59■■□□□ 1.05
CIRBP-233ENST00000591622 ZPR1O75312 459 aa21.58■■□□□ 1.05
CIRBP-233ENST00000591622 EIF5P55010 431 aaKnown RBP21.58■■□□□ 1.05
CIRBP-233ENST00000591622 NEUROD2Q15784 382 aa21.58■■□□□ 1.05
CIRBP-233ENST00000591622 CCDC184Q52MB2 194 aa21.58■■□□□ 1.05
CIRBP-233ENST00000591622 NARFQ9UHQ1 456 aa21.58■■□□□ 1.05
CIRBP-233ENST00000591622 USP16Q9Y5T5 823 aa21.58■■□□□ 1.05
CIRBP-233ENST00000591622 PRAMEF22A3QJZ6 481 aa21.57■■□□□ 1.04
CIRBP-233ENST00000591622 A1BGP04217 495 aa21.57■■□□□ 1.04
CIRBP-233ENST00000591622 FKBP8Q14318 412 aa21.57■■□□□ 1.04
CIRBP-233ENST00000591622 IL6STP40189 918 aaPredicted RBP21.56■■□□□ 1.04
CIRBP-233ENST00000591622 USPL1Q5W0Q7 1092 aa21.56■■□□□ 1.04
CIRBP-233ENST00000591622 A0A087WZG4 1122 aa21.55■■□□□ 1.04
CIRBP-233ENST00000591622 EIF4A1P60842 406 aaKnown RBP21.54■■□□□ 1.04
CIRBP-233ENST00000591622 TRIM35Q9UPQ4 493 aa21.54■■□□□ 1.04
CIRBP-233ENST00000591622 PARP3Q9Y6F1 533 aa21.54■■□□□ 1.04
CIRBP-233ENST00000591622 BABAM1Q9NWV8 329 aa21.53■■□□□ 1.04
CIRBP-233ENST00000591622 ZNF330Q9Y3S2 320 aaPredicted RBP21.53■■□□□ 1.04
CIRBP-233ENST00000591622 KDM3BQ7LBC6 1761 aa21.52■■□□□ 1.04
CIRBP-233ENST00000591622 GIGYF1O75420 1035 aaPredicted RBP21.52■■□□□ 1.04
CIRBP-233ENST00000591622 TM4SF1P30408 202 aa21.52■■□□□ 1.04
CIRBP-233ENST00000591622 GPR162Q16538 588 aa21.52■■□□□ 1.04
CIRBP-233ENST00000591622 NPM2Q86SE8 214 aaKnown RBP21.52■■□□□ 1.04
CIRBP-233ENST00000591622 BCL2L12Q9HB09 334 aa21.52■■□□□ 1.04
CIRBP-233ENST00000591622 TSPYL4Q9UJ04 414 aa21.52■■□□□ 1.04
CIRBP-233ENST00000591622 DDR1Q08345 913 aa21.51■■□□□ 1.03
CIRBP-233ENST00000591622 MRS2Q9HD23 443 aa21.51■■□□□ 1.03
CIRBP-233ENST00000591622 APAF1O14727 1248 aa21.5■■□□□ 1.03
CIRBP-233ENST00000591622 PIP4K2AP48426 406 aaPredicted RBP21.5■■□□□ 1.03
CIRBP-233ENST00000591622 TBC1D2BQ9UPU7 963 aa21.5■■□□□ 1.03
CIRBP-233ENST00000591622 NBPF26B4DH59 902 aa21.49■■□□□ 1.03
CIRBP-233ENST00000591622 NBPF10Q6P3W6 841 aaKnown RBP21.49■■□□□ 1.03
CIRBP-233ENST00000591622 PELP1Q8IZL8 1130 aaKnown RBP21.49■■□□□ 1.03
CIRBP-233ENST00000591622 NBPF15Q8N660 670 aa21.49■■□□□ 1.03
CIRBP-233ENST00000591622 C10orf71Q711Q0 1435 aa21.48■■□□□ 1.03
CIRBP-233ENST00000591622 POLRMTO00411 1230 aaKnown RBP21.48■■□□□ 1.03
CIRBP-233ENST00000591622 NFIXQ14938 502 aa21.48■■□□□ 1.03
CIRBP-233ENST00000591622 CHL1O00533 1208 aa21.47■■□□□ 1.03
CIRBP-233ENST00000591622 TGFB2P61812 414 aa21.46■■□□□ 1.03
CIRBP-233ENST00000591622 DZIP3Q86Y13 1208 aaKnown RBP21.46■■□□□ 1.03
CIRBP-233ENST00000591622 CAMTA2O94983 1202 aa21.45■■□□□ 1.02
CIRBP-233ENST00000591622 YBX3P16989 372 aaKnown RBP eCLIP21.45■■□□□ 1.02
CIRBP-233ENST00000591622 LAS1LQ9Y4W2 734 aaKnown RBP21.45■■□□□ 1.02
CIRBP-233ENST00000591622 UTRNP46939 3433 aa21.44■■□□□ 1.02
CIRBP-233ENST00000591622 GOLGB1Q14789 3259 aaKnown RBP21.44■■□□□ 1.02
CIRBP-233ENST00000591622 PXDNLA1KZ92 1463 aa21.44■■□□□ 1.02
CIRBP-233ENST00000591622 TBC1D9BQ66K14 1250 aa21.43■■□□□ 1.02
CIRBP-233ENST00000591622 BICDL1Q6ZP65 573 aa21.43■■□□□ 1.02
CIRBP-233ENST00000591622 CFAP44Q96MT7 982 aa21.43■■□□□ 1.02
CIRBP-233ENST00000591622 LAMB4A4D0S4 1761 aa21.43■■□□□ 1.02
CIRBP-233ENST00000591622 A0A0G2JLW4 131 aa21.42■■□□□ 1.02
CIRBP-233ENST00000591622 GRIN3BO60391 1043 aa21.42■■□□□ 1.02
CIRBP-233ENST00000591622 SERPINB2P05120 415 aa21.42■■□□□ 1.02
CIRBP-233ENST00000591622 SCN7AQ01118 1682 aa21.42■■□□□ 1.02
CIRBP-233ENST00000591622 KIF13BQ9NQT8 1826 aa21.41■■□□□ 1.02
CIRBP-233ENST00000591622 YY1P25490 414 aa21.41■■□□□ 1.02
CIRBP-233ENST00000591622 CALD1Q05682 793 aaKnown RBP21.41■■□□□ 1.02
CIRBP-233ENST00000591622 ERBB4Q15303 1308 aa21.4■■□□□ 1.02
CIRBP-233ENST00000591622 DPEP1P16444 411 aa21.4■■□□□ 1.02
CIRBP-233ENST00000591622 CLEC4GQ6UXB4 293 aa21.4■■□□□ 1.02
CIRBP-233ENST00000591622 WWC3Q9ULE0 1092 aa21.4■■□□□ 1.02
CIRBP-233ENST00000591622 RGL2O15211 777 aa21.39■■□□□ 1.01
CIRBP-233ENST00000591622 SETDB2Q96T68 719 aa21.39■■□□□ 1.01
CIRBP-233ENST00000591622 ZNF652Q9Y2D9 606 aa21.39■■□□□ 1.01
CIRBP-233ENST00000591622 KIAA1551Q9HCM1 1747 aa21.38■■□□□ 1.01
CIRBP-233ENST00000591622 CARMIL3Q8ND23 1372 aa21.38■■□□□ 1.01
CIRBP-233ENST00000591622 ZNF853P0CG23 659 aa21.38■■□□□ 1.01
CIRBP-233ENST00000591622 MYL6BP14649 208 aa21.38■■□□□ 1.01
CIRBP-233ENST00000591622 EIF2S2P20042 333 aaKnown RBP21.38■■□□□ 1.01
CIRBP-233ENST00000591622 NGEFQ8N5V2 710 aa21.38■■□□□ 1.01
CIRBP-233ENST00000591622 IFT57Q9NWB7 429 aa21.38■■□□□ 1.01
CIRBP-233ENST00000591622 KCNA3P22001 575 aa21.37■■□□□ 1.01
CIRBP-233ENST00000591622 GNAI1P63096 354 aa21.37■■□□□ 1.01
CIRBP-233ENST00000591622 KRT24Q2M2I5 525 aa21.37■■□□□ 1.01
CIRBP-233ENST00000591622 MBIPQ9NS73 344 aa21.37■■□□□ 1.01
CIRBP-233ENST00000591622 NRXN2Q9P2S2 1712 aa21.36■■□□□ 1.01
CIRBP-233ENST00000591622 PDIA6Q15084 440 aa21.36■■□□□ 1.01
CIRBP-233ENST00000591622 CCDC27Q2M243 656 aa21.36■■□□□ 1.01
CIRBP-233ENST00000591622 BCORQ6W2J9 1755 aa21.36■■□□□ 1.01
CIRBP-233ENST00000591622 NCBP3Q53F19 620 aaKnown RBP21.35■■□□□ 1.01
CIRBP-233ENST00000591622 SENP3-EIF4A1A0A087X0R7 540 aa21.34■■□□□ 1.01
CIRBP-233ENST00000591622 ERVV-1B6SEH8 477 aa21.34■■□□□ 1.01
CIRBP-233ENST00000591622 HOXB7P09629 217 aa21.34■■□□□ 1.01
CIRBP-233ENST00000591622 CHRNA5P30532 468 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms