RNA–Protein interactions for RNA: ENST00000591461.1

PKN1-213, Transcript of protein kinase N1, humanhuman

TSL 3

Gene PKN1, Length 867 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKN1-213ENST00000591461 LAS1LQ9Y4W2 734 aaKnown RBP19.28■□□□□ 0.68
PKN1-213ENST00000591461 SOS1Q07889 1333 aaPredicted RBP19.27■□□□□ 0.68
PKN1-213ENST00000591461 GYS1P13807 737 aa19.27■□□□□ 0.68
PKN1-213ENST00000591461 SYT17Q9BSW7 474 aa19.27■□□□□ 0.68
PKN1-213ENST00000591461 HMGB2P26583 209 aaKnown RBP19.26■□□□□ 0.67
PKN1-213ENST00000591461 FKBP8Q14318 412 aa19.26■□□□□ 0.67
PKN1-213ENST00000591461 USPL1Q5W0Q7 1092 aa19.26■□□□□ 0.67
PKN1-213ENST00000591461 NLGN2Q8NFZ4 835 aa19.26■□□□□ 0.67
PKN1-213ENST00000591461 MYH14Q7Z406 1995 aaKnown RBP19.25■□□□□ 0.67
PKN1-213ENST00000591461 UBR3Q6ZT12 1888 aa19.25■□□□□ 0.67
PKN1-213ENST00000591461 STARD3NLO95772 234 aa19.25■□□□□ 0.67
PKN1-213ENST00000591461 MMP10P09238 476 aa19.25■□□□□ 0.67
PKN1-213ENST00000591461 EIF4A1P60842 406 aaKnown RBP19.25■□□□□ 0.67
PKN1-213ENST00000591461 TSPYL4Q9UJ04 414 aa19.25■□□□□ 0.67
PKN1-213ENST00000591461 SIPA1L3O60292 1781 aaPredicted RBP19.24■□□□□ 0.67
PKN1-213ENST00000591461 VIRMAQ69YN4 1812 aaKnown RBP19.24■□□□□ 0.67
PKN1-213ENST00000591461 SNRPA1P09661 255 aaKnown RBP19.24■□□□□ 0.67
PKN1-213ENST00000591461 KRT24Q2M2I5 525 aa19.24■□□□□ 0.67
PKN1-213ENST00000591461 COL5A3P25940 1745 aaPredicted RBP19.23■□□□□ 0.67
PKN1-213ENST00000591461 QSER1Q2KHR3 1735 aa19.23■□□□□ 0.67
PKN1-213ENST00000591461 ADRA2BP18089 450 aa19.23■□□□□ 0.67
PKN1-213ENST00000591461 FAM9BQ8IZU0 186 aa19.23■□□□□ 0.67
PKN1-213ENST00000591461 TBC1D2BQ9UPU7 963 aa19.23■□□□□ 0.67
PKN1-213ENST00000591461 SALL2Q9Y467 1007 aaPredicted RBP19.23■□□□□ 0.67
PKN1-213ENST00000591461 NBPF26B4DH59 902 aa19.22■□□□□ 0.67
PKN1-213ENST00000591461 EIF5P55010 431 aaKnown RBP19.22■□□□□ 0.67
PKN1-213ENST00000591461 NBPF10Q6P3W6 841 aaKnown RBP19.22■□□□□ 0.67
PKN1-213ENST00000591461 NBPF15Q8N660 670 aa19.22■□□□□ 0.67
PKN1-213ENST00000591461 BCL2L12Q9HB09 334 aa19.22■□□□□ 0.67
PKN1-213ENST00000591461 WWC3Q9ULE0 1092 aa19.22■□□□□ 0.67
PKN1-213ENST00000591461 USP42Q9H9J4 1324 aaKnown RBP19.22■□□□□ 0.67
PKN1-213ENST00000591461 ZNF831Q5JPB2 1677 aa19.21■□□□□ 0.67
PKN1-213ENST00000591461 GIGYF1O75420 1035 aaPredicted RBP19.21■□□□□ 0.67
PKN1-213ENST00000591461 LMOD3Q0VAK6 560 aa19.21■□□□□ 0.67
PKN1-213ENST00000591461 TEX13AQ9BXU3 409 aaPredicted RBP19.21■□□□□ 0.67
PKN1-213ENST00000591461 DLG5Q8TDM6 1919 aa19.21■□□□□ 0.67
PKN1-213ENST00000591461 UBR2Q8IWV8 1755 aa19.21■□□□□ 0.67
PKN1-213ENST00000591461 COL15A1P39059 1388 aa19.2■□□□□ 0.66
PKN1-213ENST00000591461 NGEFQ8N5V2 710 aa19.2■□□□□ 0.66
PKN1-213ENST00000591461 NECTIN2Q92692 538 aa19.2■□□□□ 0.66
PKN1-213ENST00000591461 ZPR1O75312 459 aa19.19■□□□□ 0.66
PKN1-213ENST00000591461 DDR1Q08345 913 aa19.19■□□□□ 0.66
PKN1-213ENST00000591461 NLGN1Q8N2Q7 840 aa19.19■□□□□ 0.66
PKN1-213ENST00000591461 CHL1O00533 1208 aa19.18■□□□□ 0.66
PKN1-213ENST00000591461 BICDL1Q6ZP65 573 aa19.18■□□□□ 0.66
PKN1-213ENST00000591461 NARFQ9UHQ1 456 aa19.18■□□□□ 0.66
PKN1-213ENST00000591461 EIF2S2P20042 333 aaKnown RBP19.17■□□□□ 0.66
PKN1-213ENST00000591461 ANXA1P04083 346 aa19.16■□□□□ 0.66
PKN1-213ENST00000591461 TM4SF1P30408 202 aa19.16■□□□□ 0.66
PKN1-213ENST00000591461 IL6STP40189 918 aaPredicted RBP19.16■□□□□ 0.66
PKN1-213ENST00000591461 PELP1Q8IZL8 1130 aaKnown RBP19.16■□□□□ 0.66
PKN1-213ENST00000591461 CICQ96RK0 1608 aaPredicted RBP19.15■□□□□ 0.66
PKN1-213ENST00000591461 MYL6BP14649 208 aa19.15■□□□□ 0.66
PKN1-213ENST00000591461 NFIXQ14938 502 aa19.15■□□□□ 0.66
PKN1-213ENST00000591461 MBIPQ9NS73 344 aa19.15■□□□□ 0.66
PKN1-213ENST00000591461 POLRMTO00411 1230 aaKnown RBP19.14■□□□□ 0.65
PKN1-213ENST00000591461 CAMTA2O94983 1202 aa19.14■□□□□ 0.65
PKN1-213ENST00000591461 PROSER3Q2NL68 480 aa19.14■□□□□ 0.65
PKN1-213ENST00000591461 TBC1D9BQ66K14 1250 aa19.14■□□□□ 0.65
PKN1-213ENST00000591461 DZIP3Q86Y13 1208 aaKnown RBP19.14■□□□□ 0.65
PKN1-213ENST00000591461 CCDC24Q8N4L8 307 aa19.14■□□□□ 0.65
PKN1-213ENST00000591461 PARP3Q9Y6F1 533 aa19.14■□□□□ 0.65
PKN1-213ENST00000591461 ZNF853P0CG23 659 aa19.13■□□□□ 0.65
PKN1-213ENST00000591461 COL24A1Q17RW2 1714 aa19.13■□□□□ 0.65
PKN1-213ENST00000591461 A0A087WZG4 1122 aa19.12■□□□□ 0.65
PKN1-213ENST00000591461 ELL2O00472 640 aaPredicted RBP19.12■□□□□ 0.65
PKN1-213ENST00000591461 TTLL7Q6ZT98 887 aa19.12■□□□□ 0.65
PKN1-213ENST00000591461 CFAP44Q96MT7 982 aa19.12■□□□□ 0.65
PKN1-213ENST00000591461 C4AP0C0L4 1744 aa19.11■□□□□ 0.65
PKN1-213ENST00000591461 HLFQ16534 295 aa19.11■□□□□ 0.65
PKN1-213ENST00000591461 WWC1Q8IX03 1113 aa19.11■□□□□ 0.65
PKN1-213ENST00000591461 TSR2Q969E8 191 aaKnown RBP19.11■□□□□ 0.65
PKN1-213ENST00000591461 CD2APQ9Y5K6 639 aa19.11■□□□□ 0.65
PKN1-213ENST00000591461 A0A0G2JLW4 131 aa19.1■□□□□ 0.65
PKN1-213ENST00000591461 YBX3P16989 372 aaKnown RBP eCLIP19.1■□□□□ 0.659e-7■■□□□ 13.6
PKN1-213ENST00000591461 PDIA6Q15084 440 aa19.1■□□□□ 0.65
PKN1-213ENST00000591461 GPR162Q16538 588 aa19.1■□□□□ 0.65
PKN1-213ENST00000591461 BABAM1Q9NWV8 329 aa19.1■□□□□ 0.65
PKN1-213ENST00000591461 KDM3BQ7LBC6 1761 aa19.1■□□□□ 0.65
PKN1-213ENST00000591461 DIEXFQ68CQ4 756 aaKnown RBP19.09■□□□□ 0.65
PKN1-213ENST00000591461 NPM2Q86SE8 214 aaKnown RBP19.09■□□□□ 0.65
PKN1-213ENST00000591461 MIER1Q8N108 512 aa19.09■□□□□ 0.65
PKN1-213ENST00000591461 SERPINB2P05120 415 aa19.08■□□□□ 0.64
PKN1-213ENST00000591461 C8orf58Q8NAV2 365 aa19.08■□□□□ 0.64
PKN1-213ENST00000591461 IFT57Q9NWB7 429 aa19.08■□□□□ 0.64
PKN1-213ENST00000591461 GOLGB1Q14789 3259 aaKnown RBP19.07■□□□□ 0.64
PKN1-213ENST00000591461 UTRNP46939 3433 aa19.07■□□□□ 0.64
PKN1-213ENST00000591461 FAM177BA6PVY3 158 aa19.07■□□□□ 0.64
PKN1-213ENST00000591461 DPEP1P16444 411 aa19.07■□□□□ 0.64
PKN1-213ENST00000591461 DUSP27Q5VZP5 1158 aa19.07■□□□□ 0.64
PKN1-213ENST00000591461 LRP10Q7Z4F1 713 aa19.07■□□□□ 0.64
PKN1-213ENST00000591461 TSPYL6Q8N831 410 aa19.07■□□□□ 0.64
PKN1-213ENST00000591461 ZBTB3Q9H5J0 574 aa19.07■□□□□ 0.64
PKN1-213ENST00000591461 CHRNA5P30532 468 aa19.06■□□□□ 0.64
PKN1-213ENST00000591461 GNAI1P63096 354 aa19.06■□□□□ 0.64
PKN1-213ENST00000591461 SPINK5Q9NQ38 1064 aaPredicted RBP19.06■□□□□ 0.64
PKN1-213ENST00000591461 AIMP1Q12904 312 aaKnown RBP19.05■□□□□ 0.64
PKN1-213ENST00000591461 ZNF428Q96B54 188 aa19.05■□□□□ 0.64
PKN1-213ENST00000591461 CHPF2Q9P2E5 772 aa19.05■□□□□ 0.64
PKN1-213ENST00000591461 CARMIL3Q8ND23 1372 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms