RNA–Protein interactions for RNA: ENST00000591315.5

VMP1-211, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-211ENST00000591315 SRP68Q9UHB9 627 aaKnown RBP15.18■□□□□ 0.02
VMP1-211ENST00000591315 COL24A1Q17RW2 1714 aa15.17■□□□□ 0.02
VMP1-211ENST00000591315 KDM3BQ7LBC6 1761 aa15.17■□□□□ 0.02
VMP1-211ENST00000591315 A1BGP04217 495 aa15.17■□□□□ 0.02
VMP1-211ENST00000591315 PIP4K2AP48426 406 aaPredicted RBP15.17■□□□□ 0.02
VMP1-211ENST00000591315 TRAPPC3LQ5T215 181 aa15.17■□□□□ 0.02
VMP1-211ENST00000591315 FLAD1Q8NFF5 587 aa15.17■□□□□ 0.02
VMP1-211ENST00000591315 USP16Q9Y5T5 823 aa15.17■□□□□ 0.02
VMP1-211ENST00000591315 CANXP27824 592 aaKnown RBP15.16■□□□□ 0.02
VMP1-211ENST00000591315 ARXQ96QS3 562 aa15.16■□□□□ 0.02
VMP1-211ENST00000591315 SOS1Q07889 1333 aaPredicted RBP15.16■□□□□ 0.02
VMP1-211ENST00000591315 C4AP0C0L4 1744 aa15.15■□□□□ 0.02
VMP1-211ENST00000591315 FHDC1Q9C0D6 1143 aaPredicted RBP15.15■□□□□ 0.02
VMP1-211ENST00000591315 STARD3NLO95772 234 aa15.14■□□□□ 0.01
VMP1-211ENST00000591315 HMGB2P26583 209 aaKnown RBP15.14■□□□□ 0.01
VMP1-211ENST00000591315 EIF4A1P60842 406 aaKnown RBP15.14■□□□□ 0.01
VMP1-211ENST00000591315 SNRPA1P09661 255 aaKnown RBP15.13■□□□□ 0.01
VMP1-211ENST00000591315 GYS1P13807 737 aa15.13■□□□□ 0.01
VMP1-211ENST00000591315 POLD1P28340 1107 aa15.13■□□□□ 0.01
VMP1-211ENST00000591315 RFC4P35249 363 aa15.13■□□□□ 0.01
VMP1-211ENST00000591315 LMOD3Q0VAK6 560 aa15.13■□□□□ 0.01
VMP1-211ENST00000591315 KRT24Q2M2I5 525 aa15.13■□□□□ 0.01
VMP1-211ENST00000591315 FAM9BQ8IZU0 186 aa15.13■□□□□ 0.01
VMP1-211ENST00000591315 KLHL34Q8N239 644 aa15.13■□□□□ 0.01
VMP1-211ENST00000591315 TSPYL4Q9UJ04 414 aa15.13■□□□□ 0.01
VMP1-211ENST00000591315 LAS1LQ9Y4W2 734 aaKnown RBP15.13■□□□□ 0.01
VMP1-211ENST00000591315 NBPF26B4DH59 902 aa15.12■□□□□ 0.01
VMP1-211ENST00000591315 EIF5P55010 431 aaKnown RBP15.12■□□□□ 0.01
VMP1-211ENST00000591315 FKBP8Q14318 412 aa15.12■□□□□ 0.01
VMP1-211ENST00000591315 NBPF10Q6P3W6 841 aaKnown RBP15.12■□□□□ 0.01
VMP1-211ENST00000591315 NBPF15Q8N660 670 aa15.12■□□□□ 0.01
VMP1-211ENST00000591315 GIGYF1O75420 1035 aaPredicted RBP15.11■□□□□ 0.01
VMP1-211ENST00000591315 SYT17Q9BSW7 474 aa15.11■□□□□ 0.01
VMP1-211ENST00000591315 TEX13AQ9BXU3 409 aaPredicted RBP15.11■□□□□ 0.01
VMP1-211ENST00000591315 ZNF330Q9Y3S2 320 aaPredicted RBP15.11■□□□□ 0.01
VMP1-211ENST00000591315 SALL2Q9Y467 1007 aaPredicted RBP15.11■□□□□ 0.01
VMP1-211ENST00000591315 USP42Q9H9J4 1324 aaKnown RBP15.11■□□□□ 0.01
VMP1-211ENST00000591315 COL15A1P39059 1388 aa15.11■□□□□ 0.01
VMP1-211ENST00000591315 CHL1O00533 1208 aa15.1■□□□□ 0.01
VMP1-211ENST00000591315 MMP10P09238 476 aa15.1■□□□□ 0.01
VMP1-211ENST00000591315 USPL1Q5W0Q7 1092 aa15.1■□□□□ 0.01
VMP1-211ENST00000591315 BCL2L12Q9HB09 334 aa15.1■□□□□ 0.01
VMP1-211ENST00000591315 TBC1D2BQ9UPU7 963 aa15.1■□□□□ 0.01
VMP1-211ENST00000591315 NLGN2Q8NFZ4 835 aa15.09■□□□□ 0.01
VMP1-211ENST00000591315 GOLGB1Q14789 3259 aaKnown RBP15.09■□□□□ 0.01
VMP1-211ENST00000591315 DDR1Q08345 913 aa15.08■□□□□ 0
VMP1-211ENST00000591315 MAPK8IP2Q13387 824 aaPredicted RBP15.08■□□□□ 0
VMP1-211ENST00000591315 NARFQ9UHQ1 456 aa15.08■□□□□ 0
VMP1-211ENST00000591315 ZPR1O75312 459 aa15.07■□□□□ 0
VMP1-211ENST00000591315 ZNF853P0CG23 659 aa15.07■□□□□ 0
VMP1-211ENST00000591315 IL6STP40189 918 aaPredicted RBP15.07■□□□□ 0
VMP1-211ENST00000591315 NLGN1Q8N2Q7 840 aa15.07■□□□□ 0
VMP1-211ENST00000591315 NECTIN2Q92692 538 aa15.07■□□□□ 0
VMP1-211ENST00000591315 MBIPQ9NS73 344 aa15.07■□□□□ 0
VMP1-211ENST00000591315 LAMB4A4D0S4 1761 aa15.06■□□□□ 0
VMP1-211ENST00000591315 ANXA1P04083 346 aa15.06■□□□□ 0
VMP1-211ENST00000591315 EIF2S2P20042 333 aaKnown RBP15.06■□□□□ 0
VMP1-211ENST00000591315 DIEXFQ68CQ4 756 aaKnown RBP15.06■□□□□ 0
VMP1-211ENST00000591315 MIER1Q8N108 512 aa15.06■□□□□ 0
VMP1-211ENST00000591315 NGEFQ8N5V2 710 aa15.06■□□□□ 0
VMP1-211ENST00000591315 BABAM1Q9NWV8 329 aa15.06■□□□□ 0
VMP1-211ENST00000591315 TM4SF1P30408 202 aa15.05■□□□□ -0
VMP1-211ENST00000591315 PROSER3Q2NL68 480 aa15.05■□□□□ -0
VMP1-211ENST00000591315 WWC1Q8IX03 1113 aa15.05■□□□□ -0
VMP1-211ENST00000591315 CFAP44Q96MT7 982 aa15.05■□□□□ -0
VMP1-211ENST00000591315 CAMTA2O94983 1202 aa15.04■□□□□ -0
VMP1-211ENST00000591315 NFIXQ14938 502 aa15.04■□□□□ -0
VMP1-211ENST00000591315 BICDL1Q6ZP65 573 aa15.04■□□□□ -0
VMP1-211ENST00000591315 WWC3Q9ULE0 1092 aa15.04■□□□□ -0
VMP1-211ENST00000591315 A0A087WZG4 1122 aa15.03■□□□□ -0
VMP1-211ENST00000591315 MYL6BP14649 208 aa15.03■□□□□ -0
VMP1-211ENST00000591315 PDIA6Q15084 440 aa15.03■□□□□ -0
VMP1-211ENST00000591315 TBC1D9BQ66K14 1250 aa15.03■□□□□ -0
VMP1-211ENST00000591315 TTLL7Q6ZT98 887 aa15.03■□□□□ -0
VMP1-211ENST00000591315 DZIP3Q86Y13 1208 aaKnown RBP15.03■□□□□ -0
VMP1-211ENST00000591315 TSR2Q969E8 191 aaKnown RBP15.03■□□□□ -0
VMP1-211ENST00000591315 IFT57Q9NWB7 429 aa15.03■□□□□ -0
VMP1-211ENST00000591315 UTRNP46939 3433 aa15.02■□□□□ -0
VMP1-211ENST00000591315 POLRMTO00411 1230 aaKnown RBP15.02■□□□□ -0
VMP1-211ENST00000591315 ELL2O00472 640 aaPredicted RBP15.02■□□□□ -0
VMP1-211ENST00000591315 C8orf58Q8NAV2 365 aa15.02■□□□□ -0
VMP1-211ENST00000591315 PARP3Q9Y6F1 533 aa15.02■□□□□ -0
VMP1-211ENST00000591315 AFDNP55196 1824 aaKnown RBP15.01□□□□□ -0.01
VMP1-211ENST00000591315 SCN7AQ01118 1682 aa15.01□□□□□ -0.01
VMP1-211ENST00000591315 GNAI1P63096 354 aa15.01□□□□□ -0.01
VMP1-211ENST00000591315 HLFQ16534 295 aa15.01□□□□□ -0.01
VMP1-211ENST00000591315 CCDC27Q2M243 656 aa15.01□□□□□ -0.01
VMP1-211ENST00000591315 DUSP27Q5VZP5 1158 aa15.01□□□□□ -0.01
VMP1-211ENST00000591315 LRP10Q7Z4F1 713 aa15.01□□□□□ -0.01
VMP1-211ENST00000591315 SPINK5Q9NQ38 1064 aaPredicted RBP15.01□□□□□ -0.01
VMP1-211ENST00000591315 CD2APQ9Y5K6 639 aa15.01□□□□□ -0.01
VMP1-211ENST00000591315 CCER2I3L3R5 266 aa15□□□□□ -0.01
VMP1-211ENST00000591315 PPP4R3CPQ6ZMV5 832 aa15□□□□□ -0.01
VMP1-211ENST00000591315 CCDC24Q8N4L8 307 aa15□□□□□ -0.01
VMP1-211ENST00000591315 TSPYL6Q8N831 410 aa15□□□□□ -0.01
VMP1-211ENST00000591315 BCORQ6W2J9 1755 aa15□□□□□ -0.01
VMP1-211ENST00000591315 NPM2Q86SE8 214 aaKnown RBP14.99□□□□□ -0.01
VMP1-211ENST00000591315 PELP1Q8IZL8 1130 aaKnown RBP14.99□□□□□ -0.01
VMP1-211ENST00000591315 C10orf71Q711Q0 1435 aa14.99□□□□□ -0.01
VMP1-211ENST00000591315 N4BP2Q86UW6 1770 aaPredicted RBP14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms