RNA–Protein interactions for RNA: ENST00000590334.5

APOC1-206, Transcript of apolipoprotein C1, humanhuman

TSL 5

Gene APOC1, Length 508 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-206ENST00000590334 PRAMEF22A3QJZ6 481 aa15.6■□□□□ 0.09
APOC1-206ENST00000590334 CYP19A1P11511 503 aaPredicted RBP15.6■□□□□ 0.09
APOC1-206ENST00000590334 KCNQ4P56696 695 aa15.6■□□□□ 0.09
APOC1-206ENST00000590334 TSPYL6Q8N831 410 aa15.6■□□□□ 0.09
APOC1-206ENST00000590334 LINC00116Q8NCU8 138 aa15.6■□□□□ 0.09
APOC1-206ENST00000590334 STARD3NLO95772 234 aa15.59■□□□□ 0.09
APOC1-206ENST00000590334 TWISTNBQ3B726 338 aaPredicted RBP15.59■□□□□ 0.09
APOC1-206ENST00000590334 RC3H1Q5TC82 1133 aaKnown RBP15.59■□□□□ 0.09
APOC1-206ENST00000590334 USP16Q9Y5T5 823 aa15.59■□□□□ 0.09
APOC1-206ENST00000590334 CNTNAP4Q9C0A0 1308 aa15.59■□□□□ 0.09
APOC1-206ENST00000590334 C4AP0C0L4 1744 aa15.58■□□□□ 0.08
APOC1-206ENST00000590334 VAMP4O75379 141 aa15.58■□□□□ 0.08
APOC1-206ENST00000590334 CHMP4AQ9BY43 222 aa15.58■□□□□ 0.08
APOC1-206ENST00000590334 SOCS7O14512 581 aa15.57■□□□□ 0.08
APOC1-206ENST00000590334 CT47B1P0C2W7 299 aaPredicted RBP15.57■□□□□ 0.08
APOC1-206ENST00000590334 ERBB4Q15303 1308 aa15.57■□□□□ 0.08
APOC1-206ENST00000590334 ELL2O00472 640 aaPredicted RBP15.56■□□□□ 0.08
APOC1-206ENST00000590334 CRKLP46109 303 aaKnown RBP15.56■□□□□ 0.08
APOC1-206ENST00000590334 INTS5Q6P9B9 1019 aaKnown RBP15.56■□□□□ 0.08
APOC1-206ENST00000590334 AKT1S1Q96B36 256 aa15.56■□□□□ 0.08
APOC1-206ENST00000590334 ZNF428Q96B54 188 aa15.56■□□□□ 0.08
APOC1-206ENST00000590334 CCDC87Q9NVE4 849 aa15.56■□□□□ 0.08
APOC1-206ENST00000590334 BCORQ6W2J9 1755 aa15.55■□□□□ 0.08
APOC1-206ENST00000590334 HDGFL1Q5TGJ6 251 aa15.55■□□□□ 0.08
APOC1-206ENST00000590334 CCDC30Q5VVM6 783 aa15.54■□□□□ 0.08
APOC1-206ENST00000590334 NBPF26B4DH59 902 aa15.53■□□□□ 0.08
APOC1-206ENST00000590334 A1BGP04217 495 aa15.53■□□□□ 0.08
APOC1-206ENST00000590334 EIF2S2P20042 333 aaKnown RBP15.53■□□□□ 0.08
APOC1-206ENST00000590334 PDIA6Q15084 440 aa15.53■□□□□ 0.08
APOC1-206ENST00000590334 NBPF14Q5TI25 921 aa15.53■□□□□ 0.08
APOC1-206ENST00000590334 NBPF10Q6P3W6 841 aaKnown RBP15.53■□□□□ 0.08
APOC1-206ENST00000590334 NBPF15Q8N660 670 aa15.53■□□□□ 0.08
APOC1-206ENST00000590334 DBF4Q9UBU7 674 aaPredicted RBP15.53■□□□□ 0.08
APOC1-206ENST00000590334 ZBTB1Q9Y2K1 713 aa15.53■□□□□ 0.08
APOC1-206ENST00000590334 SCN7AQ01118 1682 aa15.53■□□□□ 0.08
APOC1-206ENST00000590334 CASZ1Q86V15 1759 aa15.52■□□□□ 0.08
APOC1-206ENST00000590334 RPS6KA4O75676 772 aa15.52■□□□□ 0.08
APOC1-206ENST00000590334 IL6STP40189 918 aaPredicted RBP15.52■□□□□ 0.08
APOC1-206ENST00000590334 ZNF827Q17R98 1081 aa15.52■□□□□ 0.08
APOC1-206ENST00000590334 LRP10Q7Z4F1 713 aa15.52■□□□□ 0.08
APOC1-206ENST00000590334 AK7Q96M32 723 aa15.52■□□□□ 0.08
APOC1-206ENST00000590334 ANO8Q9HCE9 1232 aaPredicted RBP15.52■□□□□ 0.08
APOC1-206ENST00000590334 DDX21Q9NR30 783 aaKnown RBP eCLIP15.52■□□□□ 0.08
APOC1-206ENST00000590334 EIF5P55010 431 aaKnown RBP15.51■□□□□ 0.07
APOC1-206ENST00000590334 SLC15A2Q16348 729 aa15.51■□□□□ 0.07
APOC1-206ENST00000590334 ALDH1L2Q3SY69 923 aa15.51■□□□□ 0.07
APOC1-206ENST00000590334 CHPF2Q9P2E5 772 aa15.51■□□□□ 0.07
APOC1-206ENST00000590334 NUP98P52948 1817 aa15.51■□□□□ 0.07
APOC1-206ENST00000590334 ARFGEF2Q9Y6D5 1785 aa15.51■□□□□ 0.07
APOC1-206ENST00000590334 ANKRD36CQ5JPF3 1778 aa15.5■□□□□ 0.07
APOC1-206ENST00000590334 GNPATO15228 680 aa15.5■□□□□ 0.07
APOC1-206ENST00000590334 SSFA2P28290 1259 aa15.5■□□□□ 0.07
APOC1-206ENST00000590334 NECTIN2Q92692 538 aa15.5■□□□□ 0.07
APOC1-206ENST00000590334 STK32BQ9NY57 414 aa15.5■□□□□ 0.07
APOC1-206ENST00000590334 RTCBQ9Y3I0 505 aaKnown RBP15.5■□□□□ 0.07
APOC1-206ENST00000590334 COL24A1Q17RW2 1714 aa15.5■□□□□ 0.07
APOC1-206ENST00000590334 COL15A1P39059 1388 aa15.49■□□□□ 0.07
APOC1-206ENST00000590334 ADRA2BP18089 450 aa15.49■□□□□ 0.07
APOC1-206ENST00000590334 CANXP27824 592 aaKnown RBP15.49■□□□□ 0.07
APOC1-206ENST00000590334 PROSER3Q2NL68 480 aa15.49■□□□□ 0.07
APOC1-206ENST00000590334 AMIGO3Q86WK7 504 aa15.49■□□□□ 0.07
APOC1-206ENST00000590334 STK31Q9BXU1 1019 aa15.49■□□□□ 0.07
APOC1-206ENST00000590334 HYPKQ9NX55 129 aa15.49■□□□□ 0.07
APOC1-206ENST00000590334 MYL6BP14649 208 aa15.48■□□□□ 0.07
APOC1-206ENST00000590334 PIP4K2AP48426 406 aaPredicted RBP15.48■□□□□ 0.07
APOC1-206ENST00000590334 RARSP54136 660 aaKnown RBP15.48■□□□□ 0.07
APOC1-206ENST00000590334 BRPF1P55201 1214 aaPredicted RBP15.48■□□□□ 0.07
APOC1-206ENST00000590334 FLAD1Q8NFF5 587 aa15.48■□□□□ 0.07
APOC1-206ENST00000590334 SSH1Q8WYL5 1049 aa15.48■□□□□ 0.07
APOC1-206ENST00000590334 TFCP2L1Q9NZI6 479 aa15.48■□□□□ 0.07
APOC1-206ENST00000590334 N4BP2Q86UW6 1770 aaPredicted RBP15.48■□□□□ 0.07
APOC1-206ENST00000590334 SLC4A2P04920 1241 aa15.47■□□□□ 0.07
APOC1-206ENST00000590334 PNPLA7Q6ZV29 1317 aa15.46■□□□□ 0.07
APOC1-206ENST00000590334 A0A087WZG4 1122 aa15.46■□□□□ 0.07
APOC1-206ENST00000590334 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.46■□□□□ 0.07
APOC1-206ENST00000590334 ANXA1P04083 346 aa15.46■□□□□ 0.07
APOC1-206ENST00000590334 TRAPPC3LQ5T215 181 aa15.46■□□□□ 0.07
APOC1-206ENST00000590334 MRPL50Q8N5N7 158 aaKnown RBP15.46■□□□□ 0.07
APOC1-206ENST00000590334 ARHGEF1Q92888 912 aaKnown RBP15.46■□□□□ 0.07
APOC1-206ENST00000590334 TCERG1O14776 1098 aaKnown RBP15.45■□□□□ 0.06
APOC1-206ENST00000590334 RGL2O15211 777 aa15.44■□□□□ 0.06
APOC1-206ENST00000590334 SMIM5Q71RC9 77 aa15.44■□□□□ 0.06
APOC1-206ENST00000590334 COPS6Q7L5N1 327 aa15.44■□□□□ 0.06
APOC1-206ENST00000590334 COL23A1Q86Y22 540 aaPredicted RBP15.44■□□□□ 0.06
APOC1-206ENST00000590334 PHAXQ9H814 394 aaKnown RBP15.44■□□□□ 0.06
APOC1-206ENST00000590334 SMC4Q9NTJ3 1288 aa15.44■□□□□ 0.06
APOC1-206ENST00000590334 USP42Q9H9J4 1324 aaKnown RBP15.43■□□□□ 0.06
APOC1-206ENST00000590334 AFDNP55196 1824 aaKnown RBP15.43■□□□□ 0.06
APOC1-206ENST00000590334 PHF14O94880 888 aa15.43■□□□□ 0.06
APOC1-206ENST00000590334 TTLL7Q6ZT98 887 aa15.43■□□□□ 0.06
APOC1-206ENST00000590334 G2E3Q7L622 706 aa15.43■□□□□ 0.06
APOC1-206ENST00000590334 NPM2Q86SE8 214 aaKnown RBP15.43■□□□□ 0.06
APOC1-206ENST00000590334 DZIP3Q86Y13 1208 aaKnown RBP15.43■□□□□ 0.06
APOC1-206ENST00000590334 XAGE3Q8WTP9 111 aa15.43■□□□□ 0.06
APOC1-206ENST00000590334 NARFQ9UHQ1 456 aa15.43■□□□□ 0.06
APOC1-206ENST00000590334 RCAN3Q9UKA8 241 aa15.43■□□□□ 0.06
APOC1-206ENST00000590334 MAP3K15Q6ZN16 1313 aa15.43■□□□□ 0.06
APOC1-206ENST00000590334 ERVV-1B6SEH8 477 aa15.42■□□□□ 0.06
APOC1-206ENST00000590334 CAMTA2O94983 1202 aa15.42■□□□□ 0.06
APOC1-206ENST00000590334 RFC4P35249 363 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms