RNA–Protein interactions for RNA: ENST00000590188.5

CIRBP-227, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 361 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-227ENST00000590188 MIS18AQ9NYP9 233 aa23.86■■□□□ 1.41
CIRBP-227ENST00000590188 DLG5Q8TDM6 1919 aa23.86■■□□□ 1.41
CIRBP-227ENST00000590188 USP42Q9H9J4 1324 aaKnown RBP23.85■■□□□ 1.41
CIRBP-227ENST00000590188 STARD3NLO95772 234 aa23.85■■□□□ 1.41
CIRBP-227ENST00000590188 YY1P25490 414 aa23.85■■□□□ 1.41
CIRBP-227ENST00000590188 FKBP8Q14318 412 aa23.85■■□□□ 1.41
CIRBP-227ENST00000590188 CCDC146Q8IYE0 955 aa23.85■■□□□ 1.41
CIRBP-227ENST00000590188 ZNF330Q9Y3S2 320 aaPredicted RBP23.85■■□□□ 1.41
CIRBP-227ENST00000590188 CD2APQ9Y5K6 639 aa23.85■■□□□ 1.41
CIRBP-227ENST00000590188 COL15A1P39059 1388 aa23.84■■□□□ 1.41
CIRBP-227ENST00000590188 USPL1Q5W0Q7 1092 aa23.84■■□□□ 1.41
CIRBP-227ENST00000590188 PRAMEF22A3QJZ6 481 aa23.83■■□□□ 1.41
CIRBP-227ENST00000590188 ZPR1O75312 459 aa23.83■■□□□ 1.41
CIRBP-227ENST00000590188 WDR43Q15061 677 aaKnown RBP eCLIP23.83■■□□□ 1.41
CIRBP-227ENST00000590188 ZNF316A6NFI3 1004 aaPredicted RBP23.82■■□□□ 1.4
CIRBP-227ENST00000590188 TAF7Q15545 349 aaPredicted RBP23.82■■□□□ 1.4
CIRBP-227ENST00000590188 PARP3Q9Y6F1 533 aa23.82■■□□□ 1.4
CIRBP-227ENST00000590188 A1BGP04217 495 aa23.81■■□□□ 1.4
CIRBP-227ENST00000590188 RRP7AQ9Y3A4 280 aaKnown RBP23.81■■□□□ 1.4
CIRBP-227ENST00000590188 YBX3P16989 372 aaKnown RBP eCLIP23.8■■□□□ 1.4
CIRBP-227ENST00000590188 PIP4K2AP48426 406 aaPredicted RBP23.8■■□□□ 1.4
CIRBP-227ENST00000590188 TEX13AQ9BXU3 409 aaPredicted RBP23.8■■□□□ 1.4
CIRBP-227ENST00000590188 USP16Q9Y5T5 823 aa23.8■■□□□ 1.4
CIRBP-227ENST00000590188 RIPK4P57078 832 aa23.79■■□□□ 1.4
CIRBP-227ENST00000590188 DDR1Q08345 913 aa23.78■■□□□ 1.4
CIRBP-227ENST00000590188 NEUROD2Q15784 382 aa23.78■■□□□ 1.4
CIRBP-227ENST00000590188 NARFQ9UHQ1 456 aa23.78■■□□□ 1.4
CIRBP-227ENST00000590188 UTRNP46939 3433 aa23.77■■□□□ 1.4
CIRBP-227ENST00000590188 EIF5P55010 431 aaKnown RBP23.77■■□□□ 1.4
CIRBP-227ENST00000590188 ADAMTS8Q9UP79 889 aa23.77■■□□□ 1.4
CIRBP-227ENST00000590188 SNRPA1P09661 255 aaKnown RBP23.76■■□□□ 1.39
CIRBP-227ENST00000590188 TMPOP42166 694 aaKnown RBP23.76■■□□□ 1.39
CIRBP-227ENST00000590188 BCL2L12Q9HB09 334 aa23.76■■□□□ 1.39
CIRBP-227ENST00000590188 TBC1D2BQ9UPU7 963 aa23.75■■□□□ 1.39
CIRBP-227ENST00000590188 C10orf71Q711Q0 1435 aa23.75■■□□□ 1.39
CIRBP-227ENST00000590188 BICDL1Q6ZP65 573 aa23.74■■□□□ 1.39
CIRBP-227ENST00000590188 A0A087WZG4 1122 aa23.73■■□□□ 1.39
CIRBP-227ENST00000590188 POLRMTO00411 1230 aaKnown RBP23.73■■□□□ 1.39
CIRBP-227ENST00000590188 IL6STP40189 918 aaPredicted RBP23.73■■□□□ 1.39
CIRBP-227ENST00000590188 NPM2Q86SE8 214 aaKnown RBP23.73■■□□□ 1.39
CIRBP-227ENST00000590188 PNISRQ8TF01 805 aaKnown RBP23.73■■□□□ 1.39
CIRBP-227ENST00000590188 RUNDC1Q96C34 613 aa23.73■■□□□ 1.39
CIRBP-227ENST00000590188 A0A0G2JLW4 131 aa23.72■■□□□ 1.39
CIRBP-227ENST00000590188 TM4SF1P30408 202 aa23.72■■□□□ 1.39
CIRBP-227ENST00000590188 NFIXQ14938 502 aa23.72■■□□□ 1.39
CIRBP-227ENST00000590188 PXDNLA1KZ92 1463 aa23.72■■□□□ 1.39
CIRBP-227ENST00000590188 KDM3BQ7LBC6 1761 aa23.72■■□□□ 1.39
CIRBP-227ENST00000590188 N4BP2Q86UW6 1770 aaPredicted RBP23.71■■□□□ 1.39
CIRBP-227ENST00000590188 CCDC184Q52MB2 194 aa23.7■■□□□ 1.38
CIRBP-227ENST00000590188 TSPYL4Q9UJ04 414 aa23.7■■□□□ 1.38
CIRBP-227ENST00000590188 KIF13BQ9NQT8 1826 aa23.7■■□□□ 1.38
CIRBP-227ENST00000590188 GRIN3BO60391 1043 aa23.69■■□□□ 1.38
CIRBP-227ENST00000590188 DPEP1P16444 411 aa23.69■■□□□ 1.38
CIRBP-227ENST00000590188 EIF4A1P60842 406 aaKnown RBP23.69■■□□□ 1.38
CIRBP-227ENST00000590188 LMOD3Q0VAK6 560 aa23.69■■□□□ 1.38
CIRBP-227ENST00000590188 GOLGB1Q14789 3259 aaKnown RBP23.69■■□□□ 1.38
CIRBP-227ENST00000590188 KIAA1551Q9HCM1 1747 aa23.69■■□□□ 1.38
CIRBP-227ENST00000590188 TGFB2P61812 414 aa23.68■■□□□ 1.38
CIRBP-227ENST00000590188 TBC1D9BQ66K14 1250 aa23.68■■□□□ 1.38
CIRBP-227ENST00000590188 DZIP3Q86Y13 1208 aaKnown RBP23.68■■□□□ 1.38
CIRBP-227ENST00000590188 NBPF26B4DH59 902 aa23.67■■□□□ 1.38
CIRBP-227ENST00000590188 NBPF10Q6P3W6 841 aaKnown RBP23.67■■□□□ 1.38
CIRBP-227ENST00000590188 NBPF15Q8N660 670 aa23.67■■□□□ 1.38
CIRBP-227ENST00000590188 SCN7AQ01118 1682 aa23.67■■□□□ 1.38
CIRBP-227ENST00000590188 CHD4Q14839 1912 aa23.67■■□□□ 1.38
CIRBP-227ENST00000590188 GIGYF1O75420 1035 aaPredicted RBP23.66■■□□□ 1.38
CIRBP-227ENST00000590188 CAMTA2O94983 1202 aa23.66■■□□□ 1.38
CIRBP-227ENST00000590188 SERPINB2P05120 415 aa23.66■■□□□ 1.38
CIRBP-227ENST00000590188 BCS1LQ9Y276 419 aa23.66■■□□□ 1.38
CIRBP-227ENST00000590188 LAS1LQ9Y4W2 734 aaKnown RBP23.66■■□□□ 1.38
CIRBP-227ENST00000590188 NGEFQ8N5V2 710 aa23.65■■□□□ 1.38
CIRBP-227ENST00000590188 TRIM35Q9UPQ4 493 aa23.65■■□□□ 1.38
CIRBP-227ENST00000590188 LAMB4A4D0S4 1761 aa23.65■■□□□ 1.38
CIRBP-227ENST00000590188 AFDNP55196 1824 aaKnown RBP23.64■■□□□ 1.38
CIRBP-227ENST00000590188 CHRNA5P30532 468 aa23.64■■□□□ 1.37
CIRBP-227ENST00000590188 SENP3-EIF4A1A0A087X0R7 540 aa23.63■■□□□ 1.37
CIRBP-227ENST00000590188 ANP32CO43423 234 aa23.63■■□□□ 1.37
CIRBP-227ENST00000590188 CCDC24Q8N4L8 307 aa23.63■■□□□ 1.37
CIRBP-227ENST00000590188 APAF1O14727 1248 aa23.62■■□□□ 1.37
CIRBP-227ENST00000590188 CARMIL3Q8ND23 1372 aa23.62■■□□□ 1.37
CIRBP-227ENST00000590188 BCORQ6W2J9 1755 aa23.61■■□□□ 1.37
CIRBP-227ENST00000590188 MYL6BP14649 208 aa23.61■■□□□ 1.37
CIRBP-227ENST00000590188 ZNF784Q8NCA9 323 aaPredicted RBP23.61■■□□□ 1.37
CIRBP-227ENST00000590188 EIF2S2P20042 333 aaKnown RBP23.6■■□□□ 1.37
CIRBP-227ENST00000590188 KCNA3P22001 575 aa23.6■■□□□ 1.37
CIRBP-227ENST00000590188 NRXN2Q9P2S2 1712 aa23.59■■□□□ 1.37
CIRBP-227ENST00000590188 NPHP1O15259 732 aa23.58■■□□□ 1.37
CIRBP-227ENST00000590188 KRT24Q2M2I5 525 aa23.58■■□□□ 1.37
CIRBP-227ENST00000590188 NECTIN2Q92692 538 aa23.58■■□□□ 1.37
CIRBP-227ENST00000590188 SETDB2Q96T68 719 aa23.58■■□□□ 1.37
CIRBP-227ENST00000590188 MRS2Q9HD23 443 aa23.58■■□□□ 1.37
CIRBP-227ENST00000590188 PIM2Q9P1W9 311 aa23.58■■□□□ 1.37
CIRBP-227ENST00000590188 HLFQ16534 295 aa23.56■■□□□ 1.36
CIRBP-227ENST00000590188 PRR5LQ6MZQ0 368 aa23.56■■□□□ 1.36
CIRBP-227ENST00000590188 BABAM1Q9NWV8 329 aa23.56■■□□□ 1.36
CIRBP-227ENST00000590188 ZNF652Q9Y2D9 606 aa23.56■■□□□ 1.36
CIRBP-227ENST00000590188 FAM177BA6PVY3 158 aa23.55■■□□□ 1.36
CIRBP-227ENST00000590188 CHL1O00533 1208 aa23.55■■□□□ 1.36
CIRBP-227ENST00000590188 DALRD3Q5D0E6 543 aaKnown RBP23.55■■□□□ 1.36
CIRBP-227ENST00000590188 TTLL7Q6ZT98 887 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms