RNA–Protein interactions for RNA: ENST00000589429.5

U2AF1L4-212, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, humanhuman

TSL 4

Gene U2AF1L4, Length 525 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1L4-212ENST00000589429 RBM42Q9BTD8 480 aaKnown RBP20.65■□□□□ 0.9
U2AF1L4-212ENST00000589429 TSPYL4Q9UJ04 414 aa20.65■□□□□ 0.9
U2AF1L4-212ENST00000589429 PHF14O94880 888 aa20.64■□□□□ 0.89
U2AF1L4-212ENST00000589429 ZNF853P0CG23 659 aa20.64■□□□□ 0.89
U2AF1L4-212ENST00000589429 HNRNPUQ00839 825 aaKnown RBP eCLIP20.64■□□□□ 0.89
U2AF1L4-212ENST00000589429 LAMB4A4D0S4 1761 aa20.64■□□□□ 0.89
U2AF1L4-212ENST00000589429 CNTNAP4Q9C0A0 1308 aa20.63■□□□□ 0.89
U2AF1L4-212ENST00000589429 SENP3-EIF4A1A0A087X0R7 540 aa20.63■□□□□ 0.89
U2AF1L4-212ENST00000589429 SMIM5Q71RC9 77 aa20.63■□□□□ 0.89
U2AF1L4-212ENST00000589429 FLAD1Q8NFF5 587 aa20.63■□□□□ 0.89
U2AF1L4-212ENST00000589429 TEX13AQ9BXU3 409 aaPredicted RBP20.63■□□□□ 0.89
U2AF1L4-212ENST00000589429 SLC39A6Q13433 755 aa20.62■□□□□ 0.89
U2AF1L4-212ENST00000589429 MYH16Q9H6N6 1097 aa20.62■□□□□ 0.89
U2AF1L4-212ENST00000589429 SALL2Q9Y467 1007 aaPredicted RBP20.62■□□□□ 0.89
U2AF1L4-212ENST00000589429 PTCD1O75127 700 aaKnown RBP20.61■□□□□ 0.89
U2AF1L4-212ENST00000589429 GOLGA2Q08379 1002 aa20.61■□□□□ 0.89
U2AF1L4-212ENST00000589429 AMIGO3Q86WK7 504 aa20.61■□□□□ 0.89
U2AF1L4-212ENST00000589429 HEG1Q9ULI3 1381 aa20.6■□□□□ 0.89
U2AF1L4-212ENST00000589429 ZBED9Q6R2W3 1325 aa20.6■□□□□ 0.89
U2AF1L4-212ENST00000589429 SSFA2P28290 1259 aa20.6■□□□□ 0.89
U2AF1L4-212ENST00000589429 CHMP4AQ9BY43 222 aa20.6■□□□□ 0.89
U2AF1L4-212ENST00000589429 UTRNP46939 3433 aa20.6■□□□□ 0.89
U2AF1L4-212ENST00000589429 SOS1Q07889 1333 aaPredicted RBP20.59■□□□□ 0.89
U2AF1L4-212ENST00000589429 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.59■□□□□ 0.89
U2AF1L4-212ENST00000589429 E9PSI1 815 aa20.59■□□□□ 0.89
U2AF1L4-212ENST00000589429 PELP1Q8IZL8 1130 aaKnown RBP20.59■□□□□ 0.89
U2AF1L4-212ENST00000589429 ZNF496Q96IT1 587 aaPredicted RBP20.59■□□□□ 0.89
U2AF1L4-212ENST00000589429 LAS1LQ9Y4W2 734 aaKnown RBP20.59■□□□□ 0.89
U2AF1L4-212ENST00000589429 GNPATO15228 680 aa20.58■□□□□ 0.89
U2AF1L4-212ENST00000589429 SNRPA1P09661 255 aaKnown RBP20.58■□□□□ 0.89
U2AF1L4-212ENST00000589429 EIF4A1P60842 406 aaKnown RBP20.58■□□□□ 0.89
U2AF1L4-212ENST00000589429 RC3H1Q5TC82 1133 aaKnown RBP20.58■□□□□ 0.89
U2AF1L4-212ENST00000589429 MBIPQ9NS73 344 aa20.58■□□□□ 0.89
U2AF1L4-212ENST00000589429 HOXB7P09629 217 aa20.57■□□□□ 0.88
U2AF1L4-212ENST00000589429 GPR162Q16538 588 aa20.57■□□□□ 0.88
U2AF1L4-212ENST00000589429 NLGN2Q8NFZ4 835 aa20.57■□□□□ 0.88
U2AF1L4-212ENST00000589429 MIS18AQ9NYP9 233 aa20.57■□□□□ 0.88
U2AF1L4-212ENST00000589429 STARD3NLO95772 234 aa20.56■□□□□ 0.88
U2AF1L4-212ENST00000589429 KCNQ3O43525 872 aa20.55■□□□□ 0.88
U2AF1L4-212ENST00000589429 CRKLP46109 303 aaKnown RBP20.55■□□□□ 0.88
U2AF1L4-212ENST00000589429 SCN7AQ01118 1682 aa20.54■□□□□ 0.88
U2AF1L4-212ENST00000589429 ADRA2BP18089 450 aa20.54■□□□□ 0.88
U2AF1L4-212ENST00000589429 DNAJC10Q8IXB1 793 aa20.54■□□□□ 0.88
U2AF1L4-212ENST00000589429 FANCIQ9NVI1 1328 aa20.53■□□□□ 0.88
U2AF1L4-212ENST00000589429 GIGYF1O75420 1035 aaPredicted RBP20.53■□□□□ 0.88
U2AF1L4-212ENST00000589429 SLFN5Q08AF3 891 aa20.53■□□□□ 0.88
U2AF1L4-212ENST00000589429 RTCBQ9Y3I0 505 aaKnown RBP20.53■□□□□ 0.88
U2AF1L4-212ENST00000589429 BCORQ6W2J9 1755 aa20.51■□□□□ 0.87
U2AF1L4-212ENST00000589429 RPS6KA4O75676 772 aa20.51■□□□□ 0.87
U2AF1L4-212ENST00000589429 CYP19A1P11511 503 aaPredicted RBP20.51■□□□□ 0.87
U2AF1L4-212ENST00000589429 CCDC87Q9NVE4 849 aa20.51■□□□□ 0.87
U2AF1L4-212ENST00000589429 ERBB4Q15303 1308 aa20.51■□□□□ 0.87
U2AF1L4-212ENST00000589429 GOLGB1Q14789 3259 aaKnown RBP20.5■□□□□ 0.87
U2AF1L4-212ENST00000589429 TSR2Q969E8 191 aaKnown RBP20.5■□□□□ 0.87
U2AF1L4-212ENST00000589429 YTHDC1Q96MU7 727 aaKnown RBP20.5■□□□□ 0.87
U2AF1L4-212ENST00000589429 TRAPPC3LQ5T215 181 aa20.49■□□□□ 0.87
U2AF1L4-212ENST00000589429 INTS5Q6P9B9 1019 aaKnown RBP20.49■□□□□ 0.87
U2AF1L4-212ENST00000589429 TRMT2AQ8IZ69 625 aaKnown RBP20.49■□□□□ 0.87
U2AF1L4-212ENST00000589429 KIF13BQ9NQT8 1826 aa20.48■□□□□ 0.87
U2AF1L4-212ENST00000589429 COL15A1P39059 1388 aa20.48■□□□□ 0.87
U2AF1L4-212ENST00000589429 SPINK5Q9NQ38 1064 aaPredicted RBP20.48■□□□□ 0.87
U2AF1L4-212ENST00000589429 CT47B1P0C2W7 299 aaPredicted RBP20.47■□□□□ 0.87
U2AF1L4-212ENST00000589429 DUSP27Q5VZP5 1158 aa20.47■□□□□ 0.87
U2AF1L4-212ENST00000589429 ZBTB1Q9Y2K1 713 aa20.47■□□□□ 0.87
U2AF1L4-212ENST00000589429 CD2APQ9Y5K6 639 aa20.47■□□□□ 0.87
U2AF1L4-212ENST00000589429 ZNF428Q96B54 188 aa20.46■□□□□ 0.87
U2AF1L4-212ENST00000589429 TWISTNBQ3B726 338 aaPredicted RBP20.45■□□□□ 0.86
U2AF1L4-212ENST00000589429 ARHGEF1Q92888 912 aaKnown RBP20.45■□□□□ 0.86
U2AF1L4-212ENST00000589429 USP16Q9Y5T5 823 aa20.45■□□□□ 0.86
U2AF1L4-212ENST00000589429 USP42Q9H9J4 1324 aaKnown RBP20.45■□□□□ 0.86
U2AF1L4-212ENST00000589429 MMP10P09238 476 aa20.44■□□□□ 0.86
U2AF1L4-212ENST00000589429 YBX3P16989 372 aaKnown RBP eCLIP20.44■□□□□ 0.86
U2AF1L4-212ENST00000589429 RFC4P35249 363 aa20.44■□□□□ 0.86
U2AF1L4-212ENST00000589429 IL6STP40189 918 aaPredicted RBP20.44■□□□□ 0.86
U2AF1L4-212ENST00000589429 EXOSC9Q06265 439 aaKnown RBP20.44■□□□□ 0.86
U2AF1L4-212ENST00000589429 HDGFL1Q5TGJ6 251 aa20.44■□□□□ 0.86
U2AF1L4-212ENST00000589429 C8orf58Q8NAV2 365 aa20.44■□□□□ 0.86
U2AF1L4-212ENST00000589429 CDCA7LQ96GN5 454 aa20.44■□□□□ 0.86
U2AF1L4-212ENST00000589429 CCDC30Q5VVM6 783 aa20.43■□□□□ 0.86
U2AF1L4-212ENST00000589429 NPM2Q86SE8 214 aaKnown RBP20.43■□□□□ 0.86
U2AF1L4-212ENST00000589429 KRT24Q2M2I5 525 aa20.42■□□□□ 0.86
U2AF1L4-212ENST00000589429 ZNF784Q8NCA9 323 aaPredicted RBP20.42■□□□□ 0.86
U2AF1L4-212ENST00000589429 WWC3Q9ULE0 1092 aa20.42■□□□□ 0.86
U2AF1L4-212ENST00000589429 KIAA1551Q9HCM1 1747 aa20.41■□□□□ 0.86
U2AF1L4-212ENST00000589429 NRXN2Q9P2S2 1712 aa20.41■□□□□ 0.86
U2AF1L4-212ENST00000589429 A0A087WZG4 1122 aa20.41■□□□□ 0.86
U2AF1L4-212ENST00000589429 PRAMEF22A3QJZ6 481 aa20.41■□□□□ 0.86
U2AF1L4-212ENST00000589429 GYS1P13807 737 aa20.41■□□□□ 0.86
U2AF1L4-212ENST00000589429 DBF4Q9UBU7 674 aaPredicted RBP20.41■□□□□ 0.86
U2AF1L4-212ENST00000589429 AFDNP55196 1824 aaKnown RBP20.41■□□□□ 0.86
U2AF1L4-212ENST00000589429 GRIN3BO60391 1043 aa20.4■□□□□ 0.86
U2AF1L4-212ENST00000589429 EIF2S2P20042 333 aaKnown RBP20.4■□□□□ 0.86
U2AF1L4-212ENST00000589429 NLGN1Q8N2Q7 840 aa20.4■□□□□ 0.86
U2AF1L4-212ENST00000589429 DDX21Q9NR30 783 aaKnown RBP eCLIP20.4■□□□□ 0.86
U2AF1L4-212ENST00000589429 ELL2O00472 640 aaPredicted RBP20.39■□□□□ 0.85
U2AF1L4-212ENST00000589429 VAMP4O75379 141 aa20.39■□□□□ 0.85
U2AF1L4-212ENST00000589429 A1BGP04217 495 aa20.39■□□□□ 0.85
U2AF1L4-212ENST00000589429 EIF5P55010 431 aaKnown RBP20.39■□□□□ 0.85
U2AF1L4-212ENST00000589429 TSPYL6Q8N831 410 aa20.39■□□□□ 0.85
U2AF1L4-212ENST00000589429 STK31Q9BXU1 1019 aa20.39■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms