RNA–Protein interactions for RNA: ENST00000588954.5

ZNF440-206, Transcript of zinc finger protein 440, humanhuman

TSL 5

Gene ZNF440, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-206ENST00000588954 RC3H1Q5TC82 1133 aaKnown RBP12□□□□□ -0.49
ZNF440-206ENST00000588954 LINC00116Q8NCU8 138 aa12□□□□□ -0.49
ZNF440-206ENST00000588954 AKT1S1Q96B36 256 aa12□□□□□ -0.49
ZNF440-206ENST00000588954 KCPQ6ZWJ8 1503 aa12□□□□□ -0.49
ZNF440-206ENST00000588954 PAPPAQ13219 1627 aa12□□□□□ -0.49
ZNF440-206ENST00000588954 NUP188Q5SRE5 1749 aa12□□□□□ -0.49
ZNF440-206ENST00000588954 ZNF853P0CG23 659 aa11.99□□□□□ -0.49
ZNF440-206ENST00000588954 HNRNPUQ00839 825 aaKnown RBP eCLIP11.99□□□□□ -0.49
ZNF440-206ENST00000588954 NPM2Q86SE8 214 aaKnown RBP11.99□□□□□ -0.49
ZNF440-206ENST00000588954 FLAD1Q8NFF5 587 aa11.99□□□□□ -0.49
ZNF440-206ENST00000588954 MYH16Q9H6N6 1097 aa11.99□□□□□ -0.49
ZNF440-206ENST00000588954 ANO8Q9HCE9 1232 aaPredicted RBP11.99□□□□□ -0.49
ZNF440-206ENST00000588954 MBIPQ9NS73 344 aa11.99□□□□□ -0.49
ZNF440-206ENST00000588954 CNTNAP4Q9C0A0 1308 aa11.99□□□□□ -0.49
ZNF440-206ENST00000588954 ZNF831Q5JPB2 1677 aa11.98□□□□□ -0.49
ZNF440-206ENST00000588954 PSDA5PKW4 1024 aaPredicted RBP11.98□□□□□ -0.49
ZNF440-206ENST00000588954 GNPATO15228 680 aa11.98□□□□□ -0.49
ZNF440-206ENST00000588954 GIGYF1O75420 1035 aaPredicted RBP11.98□□□□□ -0.49
ZNF440-206ENST00000588954 CYP19A1P11511 503 aaPredicted RBP11.98□□□□□ -0.49
ZNF440-206ENST00000588954 CRKLP46109 303 aaKnown RBP11.98□□□□□ -0.49
ZNF440-206ENST00000588954 GOLGA2Q08379 1002 aa11.98□□□□□ -0.49
ZNF440-206ENST00000588954 ZNF827Q17R98 1081 aa11.98□□□□□ -0.49
ZNF440-206ENST00000588954 CHMP4AQ9BY43 222 aa11.98□□□□□ -0.49
ZNF440-206ENST00000588954 CCDC87Q9NVE4 849 aa11.98□□□□□ -0.49
ZNF440-206ENST00000588954 RTCBQ9Y3I0 505 aaKnown RBP11.98□□□□□ -0.49
ZNF440-206ENST00000588954 UBR2Q8IWV8 1755 aa11.97□□□□□ -0.49
ZNF440-206ENST00000588954 C5P01031 1676 aa11.97□□□□□ -0.49
ZNF440-206ENST00000588954 RPS6KA4O75676 772 aa11.96□□□□□ -0.49
ZNF440-206ENST00000588954 PHF14O94880 888 aa11.96□□□□□ -0.49
ZNF440-206ENST00000588954 HOXB7P09629 217 aa11.96□□□□□ -0.49
ZNF440-206ENST00000588954 CANXP27824 592 aaKnown RBP11.96□□□□□ -0.49
ZNF440-206ENST00000588954 SSFA2P28290 1259 aa11.96□□□□□ -0.49
ZNF440-206ENST00000588954 FKBP8Q14318 412 aa11.96□□□□□ -0.49
ZNF440-206ENST00000588954 TRAPPC3LQ5T215 181 aa11.96□□□□□ -0.49
ZNF440-206ENST00000588954 TSR2Q969E8 191 aaKnown RBP11.96□□□□□ -0.49
ZNF440-206ENST00000588954 USP16Q9Y5T5 823 aa11.96□□□□□ -0.49
ZNF440-206ENST00000588954 KDM3BQ7LBC6 1761 aa11.96□□□□□ -0.49
ZNF440-206ENST00000588954 C4BP0C0L5 1744 aa11.96□□□□□ -0.49
ZNF440-206ENST00000588954 ZNF521Q96K83 1311 aa11.95□□□□□ -0.5
ZNF440-206ENST00000588954 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.95□□□□□ -0.5
ZNF440-206ENST00000588954 PRAMEF22A3QJZ6 481 aa11.95□□□□□ -0.5
ZNF440-206ENST00000588954 E9PSI1 815 aa11.95□□□□□ -0.5
ZNF440-206ENST00000588954 EIF2S2P20042 333 aaKnown RBP11.95□□□□□ -0.5
ZNF440-206ENST00000588954 INTS5Q6P9B9 1019 aaKnown RBP11.95□□□□□ -0.5
ZNF440-206ENST00000588954 TAF1LQ8IZX4 1826 aa11.95□□□□□ -0.5
ZNF440-206ENST00000588954 SOS1Q07889 1333 aaPredicted RBP11.94□□□□□ -0.5
ZNF440-206ENST00000588954 PNPLA7Q6ZV29 1317 aa11.94□□□□□ -0.5
ZNF440-206ENST00000588954 A0A087WZG4 1122 aa11.94□□□□□ -0.5
ZNF440-206ENST00000588954 A1BGP04217 495 aa11.94□□□□□ -0.5
ZNF440-206ENST00000588954 RFC4P35249 363 aa11.94□□□□□ -0.5
ZNF440-206ENST00000588954 DUSP27Q5VZP5 1158 aa11.94□□□□□ -0.5
ZNF440-206ENST00000588954 ZBTB1Q9Y2K1 713 aa11.94□□□□□ -0.5
ZNF440-206ENST00000588954 ZNF330Q9Y3S2 320 aaPredicted RBP11.94□□□□□ -0.5
ZNF440-206ENST00000588954 CICQ96RK0 1608 aaPredicted RBP11.93□□□□□ -0.5
ZNF440-206ENST00000588954 ERBB4Q15303 1308 aa11.93□□□□□ -0.5
ZNF440-206ENST00000588954 FANCIQ9NVI1 1328 aa11.93□□□□□ -0.5
ZNF440-206ENST00000588954 ELL2O00472 640 aaPredicted RBP11.93□□□□□ -0.5
ZNF440-206ENST00000588954 IL6STP40189 918 aaPredicted RBP11.93□□□□□ -0.5
ZNF440-206ENST00000588954 KRT24Q2M2I5 525 aa11.93□□□□□ -0.5
ZNF440-206ENST00000588954 HDGFL1Q5TGJ6 251 aa11.93□□□□□ -0.5
ZNF440-206ENST00000588954 SLC16A10Q8TF71 515 aa11.93□□□□□ -0.5
ZNF440-206ENST00000588954 ARXQ96QS3 562 aa11.93□□□□□ -0.5
ZNF440-206ENST00000588954 TJP1Q07157 1748 aa11.93□□□□□ -0.5
ZNF440-206ENST00000588954 COL5A3P25940 1745 aaPredicted RBP11.92□□□□□ -0.5
ZNF440-206ENST00000588954 ZPR1O75312 459 aa11.92□□□□□ -0.5
ZNF440-206ENST00000588954 SLFN5Q08AF3 891 aa11.92□□□□□ -0.5
ZNF440-206ENST00000588954 TWISTNBQ3B726 338 aaPredicted RBP11.92□□□□□ -0.5
ZNF440-206ENST00000588954 COL23A1Q86Y22 540 aaPredicted RBP11.92□□□□□ -0.5
ZNF440-206ENST00000588954 ARHGEF1Q92888 912 aaKnown RBP11.92□□□□□ -0.5
ZNF440-206ENST00000588954 MYL6BP14649 208 aa11.91□□□□□ -0.5
ZNF440-206ENST00000588954 EIF5P55010 431 aaKnown RBP11.91□□□□□ -0.5
ZNF440-206ENST00000588954 CCDC30Q5VVM6 783 aa11.91□□□□□ -0.5
ZNF440-206ENST00000588954 C8orf58Q8NAV2 365 aa11.91□□□□□ -0.5
ZNF440-206ENST00000588954 NECTIN2Q92692 538 aa11.91□□□□□ -0.5
ZNF440-206ENST00000588954 COL15A1P39059 1388 aa11.91□□□□□ -0.5
ZNF440-206ENST00000588954 ZBED9Q6R2W3 1325 aa11.9□□□□□ -0.5
ZNF440-206ENST00000588954 PIP4K2AP48426 406 aaPredicted RBP11.9□□□□□ -0.5
ZNF440-206ENST00000588954 EXOSC9Q06265 439 aaKnown RBP11.9□□□□□ -0.5
ZNF440-206ENST00000588954 SMIM5Q71RC9 77 aa11.9□□□□□ -0.5
ZNF440-206ENST00000588954 CDCA7LQ96GN5 454 aa11.9□□□□□ -0.5
ZNF440-206ENST00000588954 STK31Q9BXU1 1019 aa11.9□□□□□ -0.5
ZNF440-206ENST00000588954 MTFR1LQ9H019 292 aa11.9□□□□□ -0.5
ZNF440-206ENST00000588954 DBF4Q9UBU7 674 aaPredicted RBP11.9□□□□□ -0.5
ZNF440-206ENST00000588954 MYH14Q7Z406 1995 aaKnown RBP11.89□□□□□ -0.51
ZNF440-206ENST00000588954 NBPF26B4DH59 902 aa11.89□□□□□ -0.51
ZNF440-206ENST00000588954 ZBTB7AO95365 584 aa11.89□□□□□ -0.51
ZNF440-206ENST00000588954 NBPF10Q6P3W6 841 aaKnown RBP11.89□□□□□ -0.51
ZNF440-206ENST00000588954 AMIGO3Q86WK7 504 aa11.89□□□□□ -0.51
ZNF440-206ENST00000588954 DZIP3Q86Y13 1208 aaKnown RBP11.89□□□□□ -0.51
ZNF440-206ENST00000588954 NBPF15Q8N660 670 aa11.89□□□□□ -0.51
ZNF440-206ENST00000588954 TSPYL6Q8N831 410 aa11.89□□□□□ -0.51
ZNF440-206ENST00000588954 PDGFDQ9GZP0 370 aaPredicted RBP11.89□□□□□ -0.51
ZNF440-206ENST00000588954 SPON1Q9HCB6 807 aa11.89□□□□□ -0.51
ZNF440-206ENST00000588954 DDX21Q9NR30 783 aaKnown RBP eCLIP11.89□□□□□ -0.51
ZNF440-206ENST00000588954 NARFQ9UHQ1 456 aa11.89□□□□□ -0.51
ZNF440-206ENST00000588954 UBR3Q6ZT12 1888 aa11.89□□□□□ -0.51
ZNF440-206ENST00000588954 QSER1Q2KHR3 1735 aa11.89□□□□□ -0.51
ZNF440-206ENST00000588954 LAMB4A4D0S4 1761 aa11.88□□□□□ -0.51
ZNF440-206ENST00000588954 POLD1P28340 1107 aa11.88□□□□□ -0.51
ZNF440-206ENST00000588954 KIF6Q6ZMV9 814 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms