RNA–Protein interactions for RNA: ENST00000588344.2

CIRBP-218, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 370 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-218ENST00000588344 IL6STP40189 918 aaPredicted RBP11.7□□□□□ -0.54
CIRBP-218ENST00000588344 TRMT2AQ8IZ69 625 aaKnown RBP11.7□□□□□ -0.54
CIRBP-218ENST00000588344 TSR2Q969E8 191 aaKnown RBP11.7□□□□□ -0.54
CIRBP-218ENST00000588344 ZNF428Q96B54 188 aa11.7□□□□□ -0.54
CIRBP-218ENST00000588344 ZNF831Q5JPB2 1677 aa11.69□□□□□ -0.54
CIRBP-218ENST00000588344 A1BGP04217 495 aa11.69□□□□□ -0.54
CIRBP-218ENST00000588344 EIF5P55010 431 aaKnown RBP11.69□□□□□ -0.54
CIRBP-218ENST00000588344 ZNF827Q17R98 1081 aa11.69□□□□□ -0.54
CIRBP-218ENST00000588344 TWISTNBQ3B726 338 aaPredicted RBP11.69□□□□□ -0.54
CIRBP-218ENST00000588344 HDGFL1Q5TGJ6 251 aa11.69□□□□□ -0.54
CIRBP-218ENST00000588344 CCDC30Q5VVM6 783 aa11.69□□□□□ -0.54
CIRBP-218ENST00000588344 ANO8Q9HCE9 1232 aaPredicted RBP11.69□□□□□ -0.54
CIRBP-218ENST00000588344 DBF4Q9UBU7 674 aaPredicted RBP11.69□□□□□ -0.54
CIRBP-218ENST00000588344 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.68□□□□□ -0.54
CIRBP-218ENST00000588344 PRAMEF22A3QJZ6 481 aa11.68□□□□□ -0.54
CIRBP-218ENST00000588344 RGL2O15211 777 aa11.68□□□□□ -0.54
CIRBP-218ENST00000588344 EIF2S2P20042 333 aaKnown RBP11.68□□□□□ -0.54
CIRBP-218ENST00000588344 CANXP27824 592 aaKnown RBP11.68□□□□□ -0.54
CIRBP-218ENST00000588344 RFC4P35249 363 aa11.68□□□□□ -0.54
CIRBP-218ENST00000588344 R3HDM1Q15032 1099 aaKnown RBP11.68□□□□□ -0.54
CIRBP-218ENST00000588344 C8orf58Q8NAV2 365 aa11.68□□□□□ -0.54
CIRBP-218ENST00000588344 SPINK5Q9NQ38 1064 aaPredicted RBP11.68□□□□□ -0.54
CIRBP-218ENST00000588344 DDX21Q9NR30 783 aaKnown RBP eCLIP11.68□□□□□ -0.54
CIRBP-218ENST00000588344 DLG5Q8TDM6 1919 aa11.68□□□□□ -0.54
CIRBP-218ENST00000588344 PAPPAQ13219 1627 aa11.68□□□□□ -0.54
CIRBP-218ENST00000588344 SIPA1L3O60292 1781 aaPredicted RBP11.67□□□□□ -0.54
CIRBP-218ENST00000588344 LY75O60449 1722 aa11.67□□□□□ -0.54
CIRBP-218ENST00000588344 EXOSC9Q06265 439 aaKnown RBP11.67□□□□□ -0.54
CIRBP-218ENST00000588344 ARHGEF1Q92888 912 aaKnown RBP11.67□□□□□ -0.54
CIRBP-218ENST00000588344 STK31Q9BXU1 1019 aa11.67□□□□□ -0.54
CIRBP-218ENST00000588344 HYPKQ9NX55 129 aa11.67□□□□□ -0.54
CIRBP-218ENST00000588344 ZBTB1Q9Y2K1 713 aa11.67□□□□□ -0.54
CIRBP-218ENST00000588344 ELL2O00472 640 aaPredicted RBP11.66□□□□□ -0.54
CIRBP-218ENST00000588344 MSH5O43196 834 aa11.66□□□□□ -0.54
CIRBP-218ENST00000588344 ZPR1O75312 459 aa11.66□□□□□ -0.54
CIRBP-218ENST00000588344 VAMP4O75379 141 aa11.66□□□□□ -0.54
CIRBP-218ENST00000588344 KRT24Q2M2I5 525 aa11.66□□□□□ -0.54
CIRBP-218ENST00000588344 NLGN1Q8N2Q7 840 aa11.66□□□□□ -0.54
CIRBP-218ENST00000588344 CDCA7LQ96GN5 454 aa11.66□□□□□ -0.54
CIRBP-218ENST00000588344 PNPLA7Q6ZV29 1317 aa11.65□□□□□ -0.54
CIRBP-218ENST00000588344 PHF14O94880 888 aa11.65□□□□□ -0.54
CIRBP-218ENST00000588344 CLEC4GQ6UXB4 293 aa11.65□□□□□ -0.54
CIRBP-218ENST00000588344 COL23A1Q86Y22 540 aaPredicted RBP11.65□□□□□ -0.54
CIRBP-218ENST00000588344 TSPYL6Q8N831 410 aa11.65□□□□□ -0.54
CIRBP-218ENST00000588344 NARFQ9UHQ1 456 aa11.65□□□□□ -0.54
CIRBP-218ENST00000588344 RREB1Q92766 1687 aa11.65□□□□□ -0.55
CIRBP-218ENST00000588344 CICQ96RK0 1608 aaPredicted RBP11.64□□□□□ -0.55
CIRBP-218ENST00000588344 NBPF26B4DH59 902 aa11.64□□□□□ -0.55
CIRBP-218ENST00000588344 ERVV-1B6SEH8 477 aa11.64□□□□□ -0.55
CIRBP-218ENST00000588344 NBPF10Q6P3W6 841 aaKnown RBP11.64□□□□□ -0.55
CIRBP-218ENST00000588344 NBPF15Q8N660 670 aa11.64□□□□□ -0.55
CIRBP-218ENST00000588344 MTFR1LQ9H019 292 aa11.64□□□□□ -0.55
CIRBP-218ENST00000588344 ZNF652Q9Y2D9 606 aa11.64□□□□□ -0.55
CIRBP-218ENST00000588344 C5P01031 1676 aa11.64□□□□□ -0.55
CIRBP-218ENST00000588344 UBR2Q8IWV8 1755 aa11.64□□□□□ -0.55
CIRBP-218ENST00000588344 PSDA5PKW4 1024 aaPredicted RBP11.63□□□□□ -0.55
CIRBP-218ENST00000588344 DDX58O95786 925 aaKnown RBP11.63□□□□□ -0.55
CIRBP-218ENST00000588344 MYL6BP14649 208 aa11.63□□□□□ -0.55
CIRBP-218ENST00000588344 PDIA6Q15084 440 aa11.63□□□□□ -0.55
CIRBP-218ENST00000588344 ALDH1L2Q3SY69 923 aa11.63□□□□□ -0.55
CIRBP-218ENST00000588344 KIF6Q6ZMV9 814 aa11.63□□□□□ -0.55
CIRBP-218ENST00000588344 DZIP3Q86Y13 1208 aaKnown RBP11.63□□□□□ -0.55
CIRBP-218ENST00000588344 ARXQ96QS3 562 aa11.63□□□□□ -0.55
CIRBP-218ENST00000588344 CHPF2Q9P2E5 772 aa11.63□□□□□ -0.55
CIRBP-218ENST00000588344 ZNF330Q9Y3S2 320 aaPredicted RBP11.63□□□□□ -0.55
CIRBP-218ENST00000588344 KDM3BQ7LBC6 1761 aa11.63□□□□□ -0.55
CIRBP-218ENST00000588344 COL15A1P39059 1388 aa11.63□□□□□ -0.55
CIRBP-218ENST00000588344 C4BP0C0L5 1744 aa11.63□□□□□ -0.55
CIRBP-218ENST00000588344 SLC4A2P04920 1241 aa11.62□□□□□ -0.55
CIRBP-218ENST00000588344 NECTIN2Q92692 538 aa11.62□□□□□ -0.55
CIRBP-218ENST00000588344 SPON1Q9HCB6 807 aa11.62□□□□□ -0.55
CIRBP-218ENST00000588344 USP42Q9H9J4 1324 aaKnown RBP11.61□□□□□ -0.55
CIRBP-218ENST00000588344 NUP188Q5SRE5 1749 aa11.61□□□□□ -0.55
CIRBP-218ENST00000588344 POLD1P28340 1107 aa11.61□□□□□ -0.55
CIRBP-218ENST00000588344 HSP90AB3PQ58FF7 597 aa11.61□□□□□ -0.55
CIRBP-218ENST00000588344 USPL1Q5W0Q7 1092 aa11.61□□□□□ -0.55
CIRBP-218ENST00000588344 ANKRD13DQ6ZTN6 518 aa11.61□□□□□ -0.55
CIRBP-218ENST00000588344 COPS6Q7L5N1 327 aa11.61□□□□□ -0.55
CIRBP-218ENST00000588344 LRP10Q7Z4F1 713 aa11.61□□□□□ -0.55
CIRBP-218ENST00000588344 AMIGO3Q86WK7 504 aa11.61□□□□□ -0.55
CIRBP-218ENST00000588344 TBC1D2BQ9UPU7 963 aa11.61□□□□□ -0.55
CIRBP-218ENST00000588344 MAP3K15Q6ZN16 1313 aa11.6□□□□□ -0.55
CIRBP-218ENST00000588344 GYS1P13807 737 aa11.6□□□□□ -0.55
CIRBP-218ENST00000588344 PIP4K2AP48426 406 aaPredicted RBP11.6□□□□□ -0.55
CIRBP-218ENST00000588344 XAGE3Q8WTP9 111 aa11.6□□□□□ -0.55
CIRBP-218ENST00000588344 VIRMAQ69YN4 1812 aaKnown RBP11.6□□□□□ -0.55
CIRBP-218ENST00000588344 CAMTA2O94983 1202 aa11.59□□□□□ -0.55
CIRBP-218ENST00000588344 ZBTB7AO95365 584 aa11.59□□□□□ -0.55
CIRBP-218ENST00000588344 BRPF1P55201 1214 aaPredicted RBP11.59□□□□□ -0.55
CIRBP-218ENST00000588344 AIMP1Q12904 312 aaKnown RBP11.59□□□□□ -0.55
CIRBP-218ENST00000588344 PROSER3Q2NL68 480 aa11.59□□□□□ -0.55
CIRBP-218ENST00000588344 SMIM5Q71RC9 77 aa11.59□□□□□ -0.55
CIRBP-218ENST00000588344 PLBD2Q8NHP8 589 aa11.59□□□□□ -0.55
CIRBP-218ENST00000588344 SETDB2Q96T68 719 aa11.59□□□□□ -0.55
CIRBP-218ENST00000588344 TJP1Q07157 1748 aa11.59□□□□□ -0.55
CIRBP-218ENST00000588344 TM4SF1P30408 202 aa11.58□□□□□ -0.56
CIRBP-218ENST00000588344 GIGYF2Q6Y7W6 1299 aaKnown RBP11.58□□□□□ -0.56
CIRBP-218ENST00000588344 TTLL7Q6ZT98 887 aa11.58□□□□□ -0.56
CIRBP-218ENST00000588344 RIC3Q7Z5B4 369 aa11.58□□□□□ -0.56
CIRBP-218ENST00000588344 YTHDC1Q96MU7 727 aaKnown RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms