RNA–Protein interactions for RNA: ENST00000588242.2

GCDH-207, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-207ENST00000588242 TEX13AQ9BXU3 409 aaPredicted RBP16.43■□□□□ 0.22
GCDH-207ENST00000588242 STARD3NLO95772 234 aa16.42■□□□□ 0.22
GCDH-207ENST00000588242 ANO8Q9HCE9 1232 aaPredicted RBP16.42■□□□□ 0.22
GCDH-207ENST00000588242 STK32BQ9NY57 414 aa16.42■□□□□ 0.22
GCDH-207ENST00000588242 TAF1LQ8IZX4 1826 aa16.42■□□□□ 0.22
GCDH-207ENST00000588242 FANCIQ9NVI1 1328 aa16.42■□□□□ 0.22
GCDH-207ENST00000588242 C4BP0C0L5 1744 aa16.42■□□□□ 0.22
GCDH-207ENST00000588242 PRAMEF22A3QJZ6 481 aa16.41■□□□□ 0.22
GCDH-207ENST00000588242 GIGYF1O75420 1035 aaPredicted RBP16.41■□□□□ 0.22
GCDH-207ENST00000588242 CT47B1P0C2W7 299 aaPredicted RBP16.41■□□□□ 0.22
GCDH-207ENST00000588242 CYP19A1P11511 503 aaPredicted RBP16.41■□□□□ 0.22
GCDH-207ENST00000588242 AK7Q96M32 723 aa16.41■□□□□ 0.22
GCDH-207ENST00000588242 COL5A3P25940 1745 aaPredicted RBP16.41■□□□□ 0.22
GCDH-207ENST00000588242 CRKLP46109 303 aaKnown RBP16.4■□□□□ 0.22
GCDH-207ENST00000588242 SLC15A2Q16348 729 aa16.4■□□□□ 0.22
GCDH-207ENST00000588242 ZNF827Q17R98 1081 aa16.4■□□□□ 0.22
GCDH-207ENST00000588242 KRT24Q2M2I5 525 aa16.4■□□□□ 0.22
GCDH-207ENST00000588242 AKT1S1Q96B36 256 aa16.4■□□□□ 0.22
GCDH-207ENST00000588242 CNTNAP4Q9C0A0 1308 aa16.4■□□□□ 0.22
GCDH-207ENST00000588242 RC3H1Q5TC82 1133 aaKnown RBP16.39■□□□□ 0.21
GCDH-207ENST00000588242 CCDC87Q9NVE4 849 aa16.39■□□□□ 0.21
GCDH-207ENST00000588242 USP16Q9Y5T5 823 aa16.39■□□□□ 0.21
GCDH-207ENST00000588242 GNPATO15228 680 aa16.38■□□□□ 0.21
GCDH-207ENST00000588242 TFCP2L1Q9NZI6 479 aa16.38■□□□□ 0.21
GCDH-207ENST00000588242 LAMB4A4D0S4 1761 aa16.38■□□□□ 0.21
GCDH-207ENST00000588242 HOXB7P09629 217 aa16.37■□□□□ 0.21
GCDH-207ENST00000588242 INTS5Q6P9B9 1019 aaKnown RBP16.37■□□□□ 0.21
GCDH-207ENST00000588242 C8orf58Q8NAV2 365 aa16.37■□□□□ 0.21
GCDH-207ENST00000588242 CCDC136Q96JN2 1154 aa16.37■□□□□ 0.21
GCDH-207ENST00000588242 SRCAPQ6ZRS2 3230 aa16.37■□□□□ 0.21
GCDH-207ENST00000588242 ELL2O00472 640 aaPredicted RBP16.36■□□□□ 0.21
GCDH-207ENST00000588242 RPS6KA4O75676 772 aa16.36■□□□□ 0.21
GCDH-207ENST00000588242 EIF2S2P20042 333 aaKnown RBP16.36■□□□□ 0.21
GCDH-207ENST00000588242 EXOSC9Q06265 439 aaKnown RBP16.36■□□□□ 0.21
GCDH-207ENST00000588242 R3HDM1Q15032 1099 aaKnown RBP16.36■□□□□ 0.21
GCDH-207ENST00000588242 EXOC6Q8TAG9 804 aa16.36■□□□□ 0.21
GCDH-207ENST00000588242 ZBTB1Q9Y2K1 713 aa16.36■□□□□ 0.21
GCDH-207ENST00000588242 RTCBQ9Y3I0 505 aaKnown RBP16.36■□□□□ 0.21
GCDH-207ENST00000588242 PLIN1O60240 522 aa16.35■□□□□ 0.21
GCDH-207ENST00000588242 A1BGP04217 495 aa16.35■□□□□ 0.21
GCDH-207ENST00000588242 CANXP27824 592 aaKnown RBP16.35■□□□□ 0.21
GCDH-207ENST00000588242 B4GALNT3Q6L9W6 998 aa16.35■□□□□ 0.21
GCDH-207ENST00000588242 SOS1Q07889 1333 aaPredicted RBP16.35■□□□□ 0.21
GCDH-207ENST00000588242 PSDA5PKW4 1024 aaPredicted RBP16.34■□□□□ 0.21
GCDH-207ENST00000588242 PHF14O94880 888 aa16.34■□□□□ 0.21
GCDH-207ENST00000588242 TWISTNBQ3B726 338 aaPredicted RBP16.34■□□□□ 0.21
GCDH-207ENST00000588242 HDGFL1Q5TGJ6 251 aa16.34■□□□□ 0.21
GCDH-207ENST00000588242 TSPYL6Q8N831 410 aa16.34■□□□□ 0.21
GCDH-207ENST00000588242 NECTIN2Q92692 538 aa16.34■□□□□ 0.21
GCDH-207ENST00000588242 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.33■□□□□ 0.2
GCDH-207ENST00000588242 SSFA2P28290 1259 aa16.33■□□□□ 0.2
GCDH-207ENST00000588242 RARSP54136 660 aaKnown RBP16.33■□□□□ 0.2
GCDH-207ENST00000588242 SMIM5Q71RC9 77 aa16.33■□□□□ 0.2
GCDH-207ENST00000588242 AMIGO3Q86WK7 504 aa16.33■□□□□ 0.2
GCDH-207ENST00000588242 FLAD1Q8NFF5 587 aa16.33■□□□□ 0.2
GCDH-207ENST00000588242 CRBNQ96SW2 442 aa16.33■□□□□ 0.2
GCDH-207ENST00000588242 PNPLA7Q6ZV29 1317 aa16.33■□□□□ 0.2
GCDH-207ENST00000588242 UBR3Q6ZT12 1888 aa16.33■□□□□ 0.2
GCDH-207ENST00000588242 MYH14Q7Z406 1995 aaKnown RBP16.33■□□□□ 0.2
GCDH-207ENST00000588242 PIP4K2AP48426 406 aaPredicted RBP16.32■□□□□ 0.2
GCDH-207ENST00000588242 ERBB4Q15303 1308 aa16.32■□□□□ 0.2
GCDH-207ENST00000588242 NPM2Q86SE8 214 aaKnown RBP16.32■□□□□ 0.2
GCDH-207ENST00000588242 TUBGCP6Q96RT7 1819 aa16.32■□□□□ 0.2
GCDH-207ENST00000588242 CHMP4AQ9BY43 222 aa16.32■□□□□ 0.2
GCDH-207ENST00000588242 ZNF330Q9Y3S2 320 aaPredicted RBP16.32■□□□□ 0.2
GCDH-207ENST00000588242 QSER1Q2KHR3 1735 aa16.31■□□□□ 0.2
GCDH-207ENST00000588242 NBPF26B4DH59 902 aa16.31■□□□□ 0.2
GCDH-207ENST00000588242 MSH5O43196 834 aa16.31■□□□□ 0.2
GCDH-207ENST00000588242 BCAR3O75815 825 aa16.31■□□□□ 0.2
GCDH-207ENST00000588242 ADRA2BP18089 450 aa16.31■□□□□ 0.2
GCDH-207ENST00000588242 IL6STP40189 918 aaPredicted RBP16.31■□□□□ 0.2
GCDH-207ENST00000588242 PDE3AQ14432 1141 aa16.31■□□□□ 0.2
GCDH-207ENST00000588242 TRAPPC3LQ5T215 181 aa16.31■□□□□ 0.2
GCDH-207ENST00000588242 NBPF10Q6P3W6 841 aaKnown RBP16.31■□□□□ 0.2
GCDH-207ENST00000588242 COL23A1Q86Y22 540 aaPredicted RBP16.31■□□□□ 0.2
GCDH-207ENST00000588242 NBPF15Q8N660 670 aa16.31■□□□□ 0.2
GCDH-207ENST00000588242 COL15A1P39059 1388 aa16.3■□□□□ 0.2
GCDH-207ENST00000588242 MYL6BP14649 208 aa16.3■□□□□ 0.2
GCDH-207ENST00000588242 EIF5P55010 431 aaKnown RBP16.3■□□□□ 0.2
GCDH-207ENST00000588242 CCDC30Q5VVM6 783 aa16.3■□□□□ 0.2
GCDH-207ENST00000588242 VAMP4O75379 141 aa16.29■□□□□ 0.2
GCDH-207ENST00000588242 RFC4P35249 363 aa16.29■□□□□ 0.2
GCDH-207ENST00000588242 ARHGEF1Q92888 912 aaKnown RBP16.29■□□□□ 0.2
GCDH-207ENST00000588242 ZNF428Q96B54 188 aa16.29■□□□□ 0.2
GCDH-207ENST00000588242 DDX21Q9NR30 783 aaKnown RBP eCLIP16.29■□□□□ 0.2
GCDH-207ENST00000588242 CHPF2Q9P2E5 772 aa16.29■□□□□ 0.2
GCDH-207ENST00000588242 DBF4Q9UBU7 674 aaPredicted RBP16.29■□□□□ 0.2
GCDH-207ENST00000588242 A0A087WZG4 1122 aa16.28■□□□□ 0.2
GCDH-207ENST00000588242 MS4A1P11836 297 aa16.28■□□□□ 0.2
GCDH-207ENST00000588242 PDIA6Q15084 440 aa16.28■□□□□ 0.2
GCDH-207ENST00000588242 C20orf194Q5TEA3 1177 aa16.28■□□□□ 0.2
GCDH-207ENST00000588242 ARXQ96QS3 562 aa16.28■□□□□ 0.2
GCDH-207ENST00000588242 PDGFDQ9GZP0 370 aaPredicted RBP16.28■□□□□ 0.2
GCDH-207ENST00000588242 ANXA1P04083 346 aa16.27■□□□□ 0.2
GCDH-207ENST00000588242 PROSER3Q2NL68 480 aa16.27■□□□□ 0.2
GCDH-207ENST00000588242 STK31Q9BXU1 1019 aa16.27■□□□□ 0.2
GCDH-207ENST00000588242 CASZ1Q86V15 1759 aa16.26■□□□□ 0.19
GCDH-207ENST00000588242 C4AP0C0L4 1744 aa16.26■□□□□ 0.19
GCDH-207ENST00000588242 TCERG1O14776 1098 aaKnown RBP16.26■□□□□ 0.19
GCDH-207ENST00000588242 DZIP3Q86Y13 1208 aaKnown RBP16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms