RNA–Protein interactions for RNA: ENST00000586993.5

DDX39A-205, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-205ENST00000586993 TAF7Q15545 349 aaPredicted RBP29.41■■■□□ 2.3
DDX39A-205ENST00000586993 RIPK4P57078 832 aa29.4■■■□□ 2.3
DDX39A-205ENST00000586993 RUNDC1Q96C34 613 aa29.4■■■□□ 2.3
DDX39A-205ENST00000586993 RFC4P35249 363 aa29.39■■■□□ 2.3
DDX39A-205ENST00000586993 SRP68Q9UHB9 627 aaKnown RBP29.39■■■□□ 2.3
DDX39A-205ENST00000586993 PRAMEF22A3QJZ6 481 aa29.38■■■□□ 2.29
DDX39A-205ENST00000586993 GYS1P13807 737 aa29.38■■■□□ 2.29
DDX39A-205ENST00000586993 KLHL34Q8N239 644 aa29.38■■■□□ 2.29
DDX39A-205ENST00000586993 UTRNP46939 3433 aa29.38■■■□□ 2.29
DDX39A-205ENST00000586993 ANP32CO43423 234 aa29.36■■■□□ 2.29
DDX39A-205ENST00000586993 STARD3NLO95772 234 aa29.36■■■□□ 2.29
DDX39A-205ENST00000586993 USP42Q9H9J4 1324 aaKnown RBP29.36■■■□□ 2.29
DDX39A-205ENST00000586993 CANXP27824 592 aaKnown RBP29.35■■■□□ 2.29
DDX39A-205ENST00000586993 COL15A1P39059 1388 aa29.35■■■□□ 2.29
DDX39A-205ENST00000586993 NEUROD2Q15784 382 aa29.34■■■□□ 2.29
DDX39A-205ENST00000586993 NLGN2Q8NFZ4 835 aa29.34■■■□□ 2.29
DDX39A-205ENST00000586993 TEX13AQ9BXU3 409 aaPredicted RBP29.34■■■□□ 2.29
DDX39A-205ENST00000586993 MMP10P09238 476 aa29.33■■■□□ 2.29
DDX39A-205ENST00000586993 USP16Q9Y5T5 823 aa29.33■■■□□ 2.29
DDX39A-205ENST00000586993 CHD4Q14839 1912 aa29.33■■■□□ 2.29
DDX39A-205ENST00000586993 A1BGP04217 495 aa29.32■■■□□ 2.28
DDX39A-205ENST00000586993 NLGN1Q8N2Q7 840 aa29.32■■■□□ 2.28
DDX39A-205ENST00000586993 TRIM35Q9UPQ4 493 aa29.32■■■□□ 2.28
DDX39A-205ENST00000586993 LAMB4A4D0S4 1761 aa29.31■■■□□ 2.28
DDX39A-205ENST00000586993 SNRPA1P09661 255 aaKnown RBP29.31■■■□□ 2.28
DDX39A-205ENST00000586993 EIF5P55010 431 aaKnown RBP29.31■■■□□ 2.28
DDX39A-205ENST00000586993 PNISRQ8TF01 805 aaKnown RBP29.31■■■□□ 2.28
DDX39A-205ENST00000586993 LMOD3Q0VAK6 560 aa29.3■■■□□ 2.28
DDX39A-205ENST00000586993 FKBP8Q14318 412 aa29.3■■■□□ 2.28
DDX39A-205ENST00000586993 GPR162Q16538 588 aa29.3■■■□□ 2.28
DDX39A-205ENST00000586993 PIP4K2AP48426 406 aaPredicted RBP29.28■■■□□ 2.28
DDX39A-205ENST00000586993 EIF4A1P60842 406 aaKnown RBP29.28■■■□□ 2.28
DDX39A-205ENST00000586993 USPL1Q5W0Q7 1092 aa29.28■■■□□ 2.28
DDX39A-205ENST00000586993 BCL2L12Q9HB09 334 aa29.27■■■□□ 2.28
DDX39A-205ENST00000586993 MRS2Q9HD23 443 aa29.27■■■□□ 2.28
DDX39A-205ENST00000586993 NARFQ9UHQ1 456 aa29.27■■■□□ 2.28
DDX39A-205ENST00000586993 SCN7AQ01118 1682 aa29.26■■■□□ 2.27
DDX39A-205ENST00000586993 APAF1O14727 1248 aa29.26■■■□□ 2.27
DDX39A-205ENST00000586993 CD2APQ9Y5K6 639 aa29.26■■■□□ 2.27
DDX39A-205ENST00000586993 KIF13BQ9NQT8 1826 aa29.25■■■□□ 2.27
DDX39A-205ENST00000586993 ZPR1O75312 459 aa29.25■■■□□ 2.27
DDX39A-205ENST00000586993 IL6STP40189 918 aaPredicted RBP29.24■■■□□ 2.27
DDX39A-205ENST00000586993 DDR1Q08345 913 aa29.24■■■□□ 2.27
DDX39A-205ENST00000586993 ZNF784Q8NCA9 323 aaPredicted RBP29.24■■■□□ 2.27
DDX39A-205ENST00000586993 TSPYL4Q9UJ04 414 aa29.24■■■□□ 2.27
DDX39A-205ENST00000586993 ZNF330Q9Y3S2 320 aaPredicted RBP29.24■■■□□ 2.27
DDX39A-205ENST00000586993 GOLGB1Q14789 3259 aaKnown RBP29.24■■■□□ 2.27
DDX39A-205ENST00000586993 GIGYF1O75420 1035 aaPredicted RBP29.23■■■□□ 2.27
DDX39A-205ENST00000586993 PELP1Q8IZL8 1130 aaKnown RBP29.23■■■□□ 2.27
DDX39A-205ENST00000586993 KIAA1551Q9HCM1 1747 aa29.23■■■□□ 2.27
DDX39A-205ENST00000586993 C10orf71Q711Q0 1435 aa29.22■■■□□ 2.27
DDX39A-205ENST00000586993 NBPF26B4DH59 902 aa29.22■■■□□ 2.27
DDX39A-205ENST00000586993 NBPF10Q6P3W6 841 aaKnown RBP29.22■■■□□ 2.27
DDX39A-205ENST00000586993 NBPF15Q8N660 670 aa29.22■■■□□ 2.27
DDX39A-205ENST00000586993 BCORQ6W2J9 1755 aa29.21■■■□□ 2.27
DDX39A-205ENST00000586993 TM4SF1P30408 202 aa29.2■■■□□ 2.26
DDX39A-205ENST00000586993 TBC1D2BQ9UPU7 963 aa29.2■■■□□ 2.26
DDX39A-205ENST00000586993 PARP3Q9Y6F1 533 aa29.2■■■□□ 2.26
DDX39A-205ENST00000586993 A0A087WZG4 1122 aa29.19■■■□□ 2.26
DDX39A-205ENST00000586993 BABAM1Q9NWV8 329 aa29.19■■■□□ 2.26
DDX39A-205ENST00000586993 AFDNP55196 1824 aaKnown RBP29.18■■■□□ 2.26
DDX39A-205ENST00000586993 NFIXQ14938 502 aa29.18■■■□□ 2.26
DDX39A-205ENST00000586993 POLRMTO00411 1230 aaKnown RBP29.17■■■□□ 2.26
DDX39A-205ENST00000586993 CHL1O00533 1208 aa29.17■■■□□ 2.26
DDX39A-205ENST00000586993 N4BP2Q86UW6 1770 aaPredicted RBP29.16■■■□□ 2.26
DDX39A-205ENST00000586993 SENP3-EIF4A1A0A087X0R7 540 aa29.16■■■□□ 2.26
DDX39A-205ENST00000586993 CAMTA2O94983 1202 aa29.16■■■□□ 2.26
DDX39A-205ENST00000586993 NRXN2Q9P2S2 1712 aa29.16■■■□□ 2.26
DDX39A-205ENST00000586993 LAS1LQ9Y4W2 734 aaKnown RBP29.15■■■□□ 2.26
DDX39A-205ENST00000586993 PXDNLA1KZ92 1463 aa29.15■■■□□ 2.26
DDX39A-205ENST00000586993 YBX3P16989 372 aaKnown RBP eCLIP29.14■■■□□ 2.26
DDX39A-205ENST00000586993 DZIP3Q86Y13 1208 aaKnown RBP29.14■■■□□ 2.26
DDX39A-205ENST00000586993 KRT24Q2M2I5 525 aa29.13■■■□□ 2.25
DDX39A-205ENST00000586993 TBC1D9BQ66K14 1250 aa29.12■■■□□ 2.25
DDX39A-205ENST00000586993 BICDL1Q6ZP65 573 aa29.1■■■□□ 2.25
DDX39A-205ENST00000586993 NPM2Q86SE8 214 aaKnown RBP29.1■■■□□ 2.25
DDX39A-205ENST00000586993 WWC3Q9ULE0 1092 aa29.1■■■□□ 2.25
DDX39A-205ENST00000586993 GRIN3BO60391 1043 aa29.09■■■□□ 2.25
DDX39A-205ENST00000586993 ZNF853P0CG23 659 aa29.09■■■□□ 2.25
DDX39A-205ENST00000586993 CFAP44Q96MT7 982 aa29.09■■■□□ 2.25
DDX39A-205ENST00000586993 MBIPQ9NS73 344 aa29.08■■■□□ 2.25
DDX39A-205ENST00000586993 BRCA1P38398 1863 aaKnown RBP29.08■■■□□ 2.25
DDX39A-205ENST00000586993 CARMIL3Q8ND23 1372 aa29.06■■■□□ 2.24
DDX39A-205ENST00000586993 A0A0G2JLW4 131 aa29.06■■■□□ 2.24
DDX39A-205ENST00000586993 SERPINB2P05120 415 aa29.06■■■□□ 2.24
DDX39A-205ENST00000586993 MYL6BP14649 208 aa29.05■■■□□ 2.24
DDX39A-205ENST00000586993 DPEP1P16444 411 aa29.05■■■□□ 2.24
DDX39A-205ENST00000586993 EIF2S2P20042 333 aaKnown RBP29.05■■■□□ 2.24
DDX39A-205ENST00000586993 TGFB2P61812 414 aa29.05■■■□□ 2.24
DDX39A-205ENST00000586993 PDIA6Q15084 440 aa29.05■■■□□ 2.24
DDX39A-205ENST00000586993 NGEFQ8N5V2 710 aa29.05■■■□□ 2.24
DDX39A-205ENST00000586993 IFT57Q9NWB7 429 aa29.05■■■□□ 2.24
DDX39A-205ENST00000586993 ERBB4Q15303 1308 aa29.04■■■□□ 2.24
DDX39A-205ENST00000586993 PROSER3Q2NL68 480 aa29.04■■■□□ 2.24
DDX39A-205ENST00000586993 LRP10Q7Z4F1 713 aa29.04■■■□□ 2.24
DDX39A-205ENST00000586993 TTLL7Q6ZT98 887 aa29.03■■■□□ 2.24
DDX39A-205ENST00000586993 FAM9BQ8IZU0 186 aa29.03■■■□□ 2.24
DDX39A-205ENST00000586993 NECTIN2Q92692 538 aa29.03■■■□□ 2.24
DDX39A-205ENST00000586993 ANKRD31Q8N7Z5 1873 aa29.03■■■□□ 2.24
DDX39A-205ENST00000586993 ANXA1P04083 346 aa29.02■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms