RNA–Protein interactions for RNA: ENST00000586967.1

CALR-204, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 394 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-204ENST00000586967 NPM2Q86SE8 214 aaKnown RBP18.83■□□□□ 0.6
CALR-204ENST00000586967 DDX21Q9NR30 783 aaKnown RBP eCLIP18.83■□□□□ 0.6
CALR-204ENST00000586967 CCNL1Q9UK58 526 aaPredicted RBP18.83■□□□□ 0.6
CALR-204ENST00000586967 SLC4A2P04920 1241 aa18.82■□□□□ 0.6
CALR-204ENST00000586967 USP16Q9Y5T5 823 aa18.82■□□□□ 0.6
CALR-204ENST00000586967 TJP1Q07157 1748 aa18.82■□□□□ 0.6
CALR-204ENST00000586967 TNS1Q9HBL0 1735 aaKnown RBP18.82■□□□□ 0.6
CALR-204ENST00000586967 PTPRCP08575 1304 aa18.81■□□□□ 0.6
CALR-204ENST00000586967 PTF1AQ7RTS3 328 aa18.81■□□□□ 0.6
CALR-204ENST00000586967 DNAJC10Q8IXB1 793 aa18.81■□□□□ 0.6
CALR-204ENST00000586967 MRPL50Q8N5N7 158 aaKnown RBP18.81■□□□□ 0.6
CALR-204ENST00000586967 ARHGAP45Q92619 1136 aa18.81■□□□□ 0.6
CALR-204ENST00000586967 SUPT16HQ9Y5B9 1047 aaKnown RBP18.81■□□□□ 0.6
CALR-204ENST00000586967 BCAR3O75815 825 aa18.8■□□□□ 0.6
CALR-204ENST00000586967 ZKSCAN2Q63HK3 967 aa18.8■□□□□ 0.6
CALR-204ENST00000586967 NECTIN2Q92692 538 aa18.8■□□□□ 0.6
CALR-204ENST00000586967 BCL2L13Q9BXK5 485 aa18.8■□□□□ 0.6
CALR-204ENST00000586967 CHPF2Q9P2E5 772 aa18.8■□□□□ 0.6
CALR-204ENST00000586967 PRAMEF22A3QJZ6 481 aa18.79■□□□□ 0.6
CALR-204ENST00000586967 DDX58O95786 925 aaKnown RBP18.79■□□□□ 0.6
CALR-204ENST00000586967 CYP19A1P11511 503 aaPredicted RBP18.79■□□□□ 0.6
CALR-204ENST00000586967 BAG6P46379 1132 aa18.79■□□□□ 0.6
CALR-204ENST00000586967 RRP1P56182 461 aaKnown RBP18.79■□□□□ 0.6
CALR-204ENST00000586967 API5Q9BZZ5 524 aaKnown RBP18.79■□□□□ 0.6
CALR-204ENST00000586967 COL5A3P25940 1745 aaPredicted RBP18.79■□□□□ 0.6
CALR-204ENST00000586967 NEFLP07196 543 aa18.78■□□□□ 0.6
CALR-204ENST00000586967 RC3H1Q5TC82 1133 aaKnown RBP18.78■□□□□ 0.6
CALR-204ENST00000586967 FRAT1Q92837 279 aaPredicted RBP18.78■□□□□ 0.6
CALR-204ENST00000586967 SLC4A9Q96Q91 983 aa18.78■□□□□ 0.6
CALR-204ENST00000586967 CCDC87Q9NVE4 849 aa18.78■□□□□ 0.6
CALR-204ENST00000586967 RNF123Q5XPI4 1314 aa18.77■□□□□ 0.6
CALR-204ENST00000586967 CNTNAP4Q9C0A0 1308 aa18.77■□□□□ 0.6
CALR-204ENST00000586967 TCERG1O14776 1098 aaKnown RBP18.76■□□□□ 0.59
CALR-204ENST00000586967 FLIIQ13045 1269 aa18.76■□□□□ 0.59
CALR-204ENST00000586967 NOB1Q9ULX3 412 aaKnown RBP18.76■□□□□ 0.59
CALR-204ENST00000586967 TAF1LQ8IZX4 1826 aa18.75■□□□□ 0.59
CALR-204ENST00000586967 MYL6BP14649 208 aa18.75■□□□□ 0.59
CALR-204ENST00000586967 IL6STP40189 918 aaPredicted RBP18.75■□□□□ 0.59
CALR-204ENST00000586967 CRKLP46109 303 aaKnown RBP18.75■□□□□ 0.59
CALR-204ENST00000586967 FKBP5Q13451 457 aaPredicted RBP18.75■□□□□ 0.59
CALR-204ENST00000586967 ITPK1Q13572 414 aa18.75■□□□□ 0.59
CALR-204ENST00000586967 PDE3AQ14432 1141 aa18.75■□□□□ 0.59
CALR-204ENST00000586967 TXNRD1Q16881 649 aa18.75■□□□□ 0.59
CALR-204ENST00000586967 ATF7IPQ6VMQ6 1270 aa18.75■□□□□ 0.59
CALR-204ENST00000586967 FTSJ3Q8IY81 847 aaKnown RBP18.75■□□□□ 0.59
CALR-204ENST00000586967 RREB1Q92766 1687 aa18.75■□□□□ 0.59
CALR-204ENST00000586967 A0A087WZG4 1122 aa18.74■□□□□ 0.59
CALR-204ENST00000586967 A1BGP04217 495 aa18.74■□□□□ 0.59
CALR-204ENST00000586967 PDIA6Q15084 440 aa18.74■□□□□ 0.59
CALR-204ENST00000586967 C4BP0C0L5 1744 aa18.72■□□□□ 0.59
CALR-204ENST00000586967 KIF6Q6ZMV9 814 aa18.72■□□□□ 0.59
CALR-204ENST00000586967 LINC00116Q8NCU8 138 aa18.72■□□□□ 0.59
CALR-204ENST00000586967 AK7Q96M32 723 aa18.72■□□□□ 0.59
CALR-204ENST00000586967 NBPF26B4DH59 902 aa18.71■□□□□ 0.59
CALR-204ENST00000586967 NBPF14Q5TI25 921 aa18.71■□□□□ 0.59
CALR-204ENST00000586967 NBPF10Q6P3W6 841 aaKnown RBP18.71■□□□□ 0.59
CALR-204ENST00000586967 INTS5Q6P9B9 1019 aaKnown RBP18.71■□□□□ 0.59
CALR-204ENST00000586967 DZIP1LQ8IYY4 767 aaKnown RBP18.71■□□□□ 0.59
CALR-204ENST00000586967 NBPF15Q8N660 670 aa18.71■□□□□ 0.59
CALR-204ENST00000586967 CHMP4BQ9H444 224 aaKnown RBP18.71■□□□□ 0.59
CALR-204ENST00000586967 ZBTB1Q9Y2K1 713 aa18.71■□□□□ 0.59
CALR-204ENST00000586967 PROSER3Q2NL68 480 aa18.7■□□□□ 0.58
CALR-204ENST00000586967 KSR2Q6VAB6 950 aa18.7■□□□□ 0.58
CALR-204ENST00000586967 COPS6Q7L5N1 327 aa18.7■□□□□ 0.58
CALR-204ENST00000586967 XAGE3Q8WTP9 111 aa18.7■□□□□ 0.58
CALR-204ENST00000586967 PHAXQ9H814 394 aaKnown RBP18.7■□□□□ 0.58
CALR-204ENST00000586967 RTCBQ9Y3I0 505 aaKnown RBP18.7■□□□□ 0.58
CALR-204ENST00000586967 PXDNLA1KZ92 1463 aa18.7■□□□□ 0.58
CALR-204ENST00000586967 EP400Q96L91 3159 aa18.69■□□□□ 0.58
CALR-204ENST00000586967 RPS6KA4O75676 772 aa18.69■□□□□ 0.58
CALR-204ENST00000586967 ANXA1P04083 346 aa18.69■□□□□ 0.58
CALR-204ENST00000586967 TRIM27P14373 513 aa18.69■□□□□ 0.58
CALR-204ENST00000586967 ADRA2BP18089 450 aa18.69■□□□□ 0.58
CALR-204ENST00000586967 EIF5P55010 431 aaKnown RBP18.69■□□□□ 0.58
CALR-204ENST00000586967 AIMP1Q12904 312 aaKnown RBP18.69■□□□□ 0.58
CALR-204ENST00000586967 ANKRD13DQ6ZTN6 518 aa18.69■□□□□ 0.58
CALR-204ENST00000586967 G2E3Q7L622 706 aa18.69■□□□□ 0.58
CALR-204ENST00000586967 RIC3Q7Z5B4 369 aa18.69■□□□□ 0.58
CALR-204ENST00000586967 ZNF330Q9Y3S2 320 aaPredicted RBP18.69■□□□□ 0.58
CALR-204ENST00000586967 RGL2O15211 777 aa18.68■□□□□ 0.58
CALR-204ENST00000586967 PLIN1O60240 522 aa18.68■□□□□ 0.58
CALR-204ENST00000586967 NEXNQ0ZGT2 675 aa18.68■□□□□ 0.58
CALR-204ENST00000586967 LRP10Q7Z4F1 713 aa18.68■□□□□ 0.58
CALR-204ENST00000586967 PLBD2Q8NHP8 589 aa18.68■□□□□ 0.58
CALR-204ENST00000586967 CAMKK2Q96RR4 588 aa18.68■□□□□ 0.58
CALR-204ENST00000586967 LRRC4BQ9NT99 713 aa18.68■□□□□ 0.58
CALR-204ENST00000586967 COL15A1P39059 1388 aa18.68■□□□□ 0.58
CALR-204ENST00000586967 GNPATO15228 680 aa18.67■□□□□ 0.58
CALR-204ENST00000586967 CCT4P50991 539 aaKnown RBP18.67■□□□□ 0.58
CALR-204ENST00000586967 EN1Q05925 392 aaPredicted RBP18.67■□□□□ 0.58
CALR-204ENST00000586967 FLAD1Q8NFF5 587 aa18.67■□□□□ 0.58
CALR-204ENST00000586967 DNAAF4Q8WXU2 420 aa18.67■□□□□ 0.58
CALR-204ENST00000586967 MYH14Q7Z406 1995 aaKnown RBP18.67■□□□□ 0.58
CALR-204ENST00000586967 ABCC4O15439 1325 aa18.67■□□□□ 0.58
CALR-204ENST00000586967 PI4KAP2A4QPH2 592 aa18.66■□□□□ 0.58
CALR-204ENST00000586967 ERVV-1B6SEH8 477 aa18.66■□□□□ 0.58
CALR-204ENST00000586967 SSFA2P28290 1259 aa18.66■□□□□ 0.58
CALR-204ENST00000586967 PIP4K2AP48426 406 aaPredicted RBP18.66■□□□□ 0.58
CALR-204ENST00000586967 KCNQ4P56696 695 aa18.66■□□□□ 0.58
CALR-204ENST00000586967 HSP90AB3PQ58FF7 597 aa18.66■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms