RNA–Protein interactions for RNA: ENST00000586856.1

ERCC2-209, Transcript of ERCC excision repair 2, TFIIH core complex helicase subunit, humanhuman

TSL 5

Gene ERCC2, Length 690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC2-209ENST00000586856 ZBTB1Q9Y2K1 713 aa31.73■■■□□ 2.67
ERCC2-209ENST00000586856 STARD3NLO95772 234 aa31.72■■■□□ 2.67
ERCC2-209ENST00000586856 RRP7AQ9Y3A4 280 aaKnown RBP31.71■■■□□ 2.67
ERCC2-209ENST00000586856 CCDC184Q52MB2 194 aa31.7■■■□□ 2.67
ERCC2-209ENST00000586856 TEX13AQ9BXU3 409 aaPredicted RBP31.7■■■□□ 2.67
ERCC2-209ENST00000586856 COL15A1P39059 1388 aa31.69■■■□□ 2.66
ERCC2-209ENST00000586856 LAMB4A4D0S4 1761 aa31.69■■■□□ 2.66
ERCC2-209ENST00000586856 LMOD3Q0VAK6 560 aa31.69■■■□□ 2.66
ERCC2-209ENST00000586856 MIS18AQ9NYP9 233 aa31.69■■■□□ 2.66
ERCC2-209ENST00000586856 USP42Q9H9J4 1324 aaKnown RBP31.69■■■□□ 2.66
ERCC2-209ENST00000586856 GYS1P13807 737 aa31.68■■■□□ 2.66
ERCC2-209ENST00000586856 PNISRQ8TF01 805 aaKnown RBP31.68■■■□□ 2.66
ERCC2-209ENST00000586856 SRP68Q9UHB9 627 aaKnown RBP31.67■■■□□ 2.66
ERCC2-209ENST00000586856 CANXP27824 592 aaKnown RBP31.66■■■□□ 2.66
ERCC2-209ENST00000586856 MMP10P09238 476 aa31.65■■■□□ 2.66
ERCC2-209ENST00000586856 NEUROD2Q15784 382 aa31.65■■■□□ 2.66
ERCC2-209ENST00000586856 NLGN1Q8N2Q7 840 aa31.65■■■□□ 2.66
ERCC2-209ENST00000586856 PRAMEF22A3QJZ6 481 aa31.64■■■□□ 2.66
ERCC2-209ENST00000586856 SNRPA1P09661 255 aaKnown RBP31.64■■■□□ 2.66
ERCC2-209ENST00000586856 SCN7AQ01118 1682 aa31.62■■■□□ 2.65
ERCC2-209ENST00000586856 NLGN2Q8NFZ4 835 aa31.62■■■□□ 2.65
ERCC2-209ENST00000586856 USP16Q9Y5T5 823 aa31.61■■■□□ 2.65
ERCC2-209ENST00000586856 ZPR1O75312 459 aa31.6■■■□□ 2.65
ERCC2-209ENST00000586856 EIF5P55010 431 aaKnown RBP31.6■■■□□ 2.65
ERCC2-209ENST00000586856 MRS2Q9HD23 443 aa31.6■■■□□ 2.65
ERCC2-209ENST00000586856 TRIM35Q9UPQ4 493 aa31.6■■■□□ 2.65
ERCC2-209ENST00000586856 A1BGP04217 495 aa31.59■■■□□ 2.65
ERCC2-209ENST00000586856 FKBP8Q14318 412 aa31.59■■■□□ 2.65
ERCC2-209ENST00000586856 USPL1Q5W0Q7 1092 aa31.59■■■□□ 2.65
ERCC2-209ENST00000586856 NARFQ9UHQ1 456 aa31.59■■■□□ 2.65
ERCC2-209ENST00000586856 CD2APQ9Y5K6 639 aa31.59■■■□□ 2.65
ERCC2-209ENST00000586856 KIF13BQ9NQT8 1826 aa31.59■■■□□ 2.65
ERCC2-209ENST00000586856 DCAF8L1A6NGE4 600 aa31.58■■■□□ 2.65
ERCC2-209ENST00000586856 IL6STP40189 918 aaPredicted RBP31.57■■■□□ 2.64
ERCC2-209ENST00000586856 EIF4A1P60842 406 aaKnown RBP31.57■■■□□ 2.64
ERCC2-209ENST00000586856 TSPYL4Q9UJ04 414 aa31.57■■■□□ 2.64
ERCC2-209ENST00000586856 ZNF330Q9Y3S2 320 aaPredicted RBP31.57■■■□□ 2.64
ERCC2-209ENST00000586856 A0A087WZG4 1122 aa31.56■■■□□ 2.64
ERCC2-209ENST00000586856 BCORQ6W2J9 1755 aa31.56■■■□□ 2.64
ERCC2-209ENST00000586856 APAF1O14727 1248 aa31.55■■■□□ 2.64
ERCC2-209ENST00000586856 PIP4K2AP48426 406 aaPredicted RBP31.54■■■□□ 2.64
ERCC2-209ENST00000586856 C10orf71Q711Q0 1435 aa31.54■■■□□ 2.64
ERCC2-209ENST00000586856 GIGYF1O75420 1035 aaPredicted RBP31.53■■■□□ 2.64
ERCC2-209ENST00000586856 DDR1Q08345 913 aa31.53■■■□□ 2.64
ERCC2-209ENST00000586856 BABAM1Q9NWV8 329 aa31.53■■■□□ 2.64
ERCC2-209ENST00000586856 PARP3Q9Y6F1 533 aa31.53■■■□□ 2.64
ERCC2-209ENST00000586856 BCL2L12Q9HB09 334 aa31.52■■■□□ 2.64
ERCC2-209ENST00000586856 KIAA1551Q9HCM1 1747 aa31.52■■■□□ 2.64
ERCC2-209ENST00000586856 NPM2Q86SE8 214 aaKnown RBP31.5■■■□□ 2.63
ERCC2-209ENST00000586856 NBPF26B4DH59 902 aa31.49■■■□□ 2.63
ERCC2-209ENST00000586856 NBPF10Q6P3W6 841 aaKnown RBP31.49■■■□□ 2.63
ERCC2-209ENST00000586856 NBPF15Q8N660 670 aa31.49■■■□□ 2.63
ERCC2-209ENST00000586856 TBC1D2BQ9UPU7 963 aa31.49■■■□□ 2.63
ERCC2-209ENST00000586856 AFDNP55196 1824 aaKnown RBP31.48■■■□□ 2.63
ERCC2-209ENST00000586856 POLRMTO00411 1230 aaKnown RBP31.47■■■□□ 2.63
ERCC2-209ENST00000586856 TM4SF1P30408 202 aa31.47■■■□□ 2.63
ERCC2-209ENST00000586856 NFIXQ14938 502 aa31.47■■■□□ 2.63
ERCC2-209ENST00000586856 NRXN2Q9P2S2 1712 aa31.46■■■□□ 2.63
ERCC2-209ENST00000586856 CHL1O00533 1208 aa31.46■■■□□ 2.63
ERCC2-209ENST00000586856 PELP1Q8IZL8 1130 aaKnown RBP31.46■■■□□ 2.63
ERCC2-209ENST00000586856 LAS1LQ9Y4W2 734 aaKnown RBP31.46■■■□□ 2.63
ERCC2-209ENST00000586856 PXDNLA1KZ92 1463 aa31.46■■■□□ 2.63
ERCC2-209ENST00000586856 N4BP2Q86UW6 1770 aaPredicted RBP31.45■■■□□ 2.63
ERCC2-209ENST00000586856 GPR162Q16538 588 aa31.45■■■□□ 2.63
ERCC2-209ENST00000586856 DZIP3Q86Y13 1208 aaKnown RBP31.45■■■□□ 2.63
ERCC2-209ENST00000586856 CAMTA2O94983 1202 aa31.44■■■□□ 2.62
ERCC2-209ENST00000586856 BICDL1Q6ZP65 573 aa31.4■■■□□ 2.62
ERCC2-209ENST00000586856 CFAP44Q96MT7 982 aa31.4■■■□□ 2.62
ERCC2-209ENST00000586856 YBX3P16989 372 aaKnown RBP eCLIP31.39■■■□□ 2.62
ERCC2-209ENST00000586856 CALD1Q05682 793 aaKnown RBP31.39■■■□□ 2.62
ERCC2-209ENST00000586856 TBC1D9BQ66K14 1250 aa31.39■■■□□ 2.62
ERCC2-209ENST00000586856 ERBB4Q15303 1308 aa31.39■■■□□ 2.62
ERCC2-209ENST00000586856 BRCA1P38398 1863 aaKnown RBP31.38■■■□□ 2.61
ERCC2-209ENST00000586856 SENP3-EIF4A1A0A087X0R7 540 aa31.38■■■□□ 2.61
ERCC2-209ENST00000586856 CHD4Q14839 1912 aa31.37■■■□□ 2.61
ERCC2-209ENST00000586856 TGFB2P61812 414 aa31.37■■■□□ 2.61
ERCC2-209ENST00000586856 KRT24Q2M2I5 525 aa31.37■■■□□ 2.61
ERCC2-209ENST00000586856 IFT57Q9NWB7 429 aa31.37■■■□□ 2.61
ERCC2-209ENST00000586856 CARMIL3Q8ND23 1372 aa31.36■■■□□ 2.61
ERCC2-209ENST00000586856 SERPINB2P05120 415 aa31.36■■■□□ 2.61
ERCC2-209ENST00000586856 ZNF853P0CG23 659 aa31.36■■■□□ 2.61
ERCC2-209ENST00000586856 MBIPQ9NS73 344 aa31.36■■■□□ 2.61
ERCC2-209ENST00000586856 WWC3Q9ULE0 1092 aa31.36■■■□□ 2.61
ERCC2-209ENST00000586856 MYL6BP14649 208 aa31.35■■■□□ 2.61
ERCC2-209ENST00000586856 EIF2S2P20042 333 aaKnown RBP31.35■■■□□ 2.61
ERCC2-209ENST00000586856 NGEFQ8N5V2 710 aa31.34■■■□□ 2.61
ERCC2-209ENST00000586856 ZNF652Q9Y2D9 606 aa31.34■■■□□ 2.61
ERCC2-209ENST00000586856 A0A0G2JLW4 131 aa31.33■■■□□ 2.61
ERCC2-209ENST00000586856 DPEP1P16444 411 aa31.33■■■□□ 2.61
ERCC2-209ENST00000586856 GNAI1P63096 354 aa31.33■■■□□ 2.61
ERCC2-209ENST00000586856 CCDC27Q2M243 656 aa31.33■■■□□ 2.61
ERCC2-209ENST00000586856 FAM9BQ8IZU0 186 aa31.32■■■□□ 2.6
ERCC2-209ENST00000586856 ANKRD31Q8N7Z5 1873 aa31.31■■■□□ 2.6
ERCC2-209ENST00000586856 NUP98P52948 1817 aa31.31■■■□□ 2.6
ERCC2-209ENST00000586856 RGL2O15211 777 aa31.31■■■□□ 2.6
ERCC2-209ENST00000586856 CLEC4GQ6UXB4 293 aa31.31■■■□□ 2.6
ERCC2-209ENST00000586856 DLEC1Q9Y238 1755 aa31.3■■■□□ 2.6
ERCC2-209ENST00000586856 PDIA6Q15084 440 aa31.3■■■□□ 2.6
ERCC2-209ENST00000586856 NECTIN2Q92692 538 aa31.3■■■□□ 2.6
ERCC2-209ENST00000586856 SETDB2Q96T68 719 aa31.3■■■□□ 2.6
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms