RNA–Protein interactions for RNA: ENST00000586638.5

APOC1-201, Transcript of apolipoprotein C1, humanhuman

TSL 3 BASIC

Gene APOC1, Length 425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOC1-201ENST00000586638 C1QTNF8P60827 252 aa13.02□□□□□ -0.33
APOC1-201ENST00000586638 SLC27A3Q5K4L6 730 aa13.02□□□□□ -0.33
APOC1-201ENST00000586638 AKT1S1Q96B36 256 aa13.02□□□□□ -0.33
APOC1-201ENST00000586638 ZNF428Q96B54 188 aa13.02□□□□□ -0.33
APOC1-201ENST00000586638 NOB1Q9ULX3 412 aaKnown RBP13.02□□□□□ -0.33
APOC1-201ENST00000586638 SPG7Q9UQ90 795 aa13.02□□□□□ -0.33
APOC1-201ENST00000586638 PHKG2P15735 406 aa13.01□□□□□ -0.33
APOC1-201ENST00000586638 TEFQ10587 303 aa13.01□□□□□ -0.33
APOC1-201ENST00000586638 TAF7Q15545 349 aaPredicted RBP13.01□□□□□ -0.33
APOC1-201ENST00000586638 FTSJ3Q8IY81 847 aaKnown RBP13.01□□□□□ -0.33
APOC1-201ENST00000586638 DZIP1LQ8IYY4 767 aaKnown RBP13.01□□□□□ -0.33
APOC1-201ENST00000586638 KLHL34Q8N239 644 aa13.01□□□□□ -0.33
APOC1-201ENST00000586638 CACNA1FO60840 1977 aa13□□□□□ -0.33
APOC1-201ENST00000586638 N4BP2Q86UW6 1770 aaPredicted RBP13□□□□□ -0.33
APOC1-201ENST00000586638 PAPPAQ13219 1627 aa13□□□□□ -0.33
APOC1-201ENST00000586638 ATF7IPQ6VMQ6 1270 aa13□□□□□ -0.33
APOC1-201ENST00000586638 TFCP2L1Q9NZI6 479 aa13□□□□□ -0.33
APOC1-201ENST00000586638 CYP27B1O15528 508 aa12.99□□□□□ -0.33
APOC1-201ENST00000586638 KCNQ3O43525 872 aa12.99□□□□□ -0.33
APOC1-201ENST00000586638 PRIM1P49642 420 aaKnown RBP12.99□□□□□ -0.33
APOC1-201ENST00000586638 BRPF1P55201 1214 aaPredicted RBP12.99□□□□□ -0.33
APOC1-201ENST00000586638 PELP1Q8IZL8 1130 aaKnown RBP12.99□□□□□ -0.33
APOC1-201ENST00000586638 SYTL4Q96C24 671 aaPredicted RBP12.99□□□□□ -0.33
APOC1-201ENST00000586638 BABAM1Q9NWV8 329 aa12.99□□□□□ -0.33
APOC1-201ENST00000586638 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.99□□□□□ -0.33
APOC1-201ENST00000586638 LAMB4A4D0S4 1761 aa12.99□□□□□ -0.33
APOC1-201ENST00000586638 PCDH11XQ9BZA7 1347 aa12.98□□□□□ -0.33
APOC1-201ENST00000586638 PCDH11YQ9BZA8 1340 aa12.98□□□□□ -0.33
APOC1-201ENST00000586638 KCNQ4P56696 695 aa12.98□□□□□ -0.33
APOC1-201ENST00000586638 MVPQ14764 893 aaKnown RBP12.98□□□□□ -0.33
APOC1-201ENST00000586638 IFNL2Q8IZJ0 200 aa12.98□□□□□ -0.33
APOC1-201ENST00000586638 PNPLA7Q6ZV29 1317 aa12.97□□□□□ -0.33
APOC1-201ENST00000586638 BTBD11A6QL63 1104 aa12.97□□□□□ -0.33
APOC1-201ENST00000586638 IPO8O15397 1037 aaKnown RBP12.97□□□□□ -0.33
APOC1-201ENST00000586638 MS4A1P11836 297 aa12.97□□□□□ -0.33
APOC1-201ENST00000586638 TMEM57Q8N5G2 664 aa12.97□□□□□ -0.33
APOC1-201ENST00000586638 UBR2Q8IWV8 1755 aa12.97□□□□□ -0.33
APOC1-201ENST00000586638 ABCC4O15439 1325 aa12.96□□□□□ -0.33
APOC1-201ENST00000586638 EIF4A1P60842 406 aaKnown RBP12.96□□□□□ -0.33
APOC1-201ENST00000586638 ITPRIPQ8IWB1 547 aa12.96□□□□□ -0.33
APOC1-201ENST00000586638 ZCRB1Q8TBF4 217 aaKnown RBP12.96□□□□□ -0.33
APOC1-201ENST00000586638 NECTIN2Q92692 538 aa12.96□□□□□ -0.33
APOC1-201ENST00000586638 SLC52A2Q9HAB3 445 aa12.96□□□□□ -0.33
APOC1-201ENST00000586638 ITGB4P16144 1822 aa12.96□□□□□ -0.33
APOC1-201ENST00000586638 DOT1LQ8TEK3 1739 aa12.96□□□□□ -0.34
APOC1-201ENST00000586638 NHSQ6T4R5 1651 aa12.96□□□□□ -0.34
APOC1-201ENST00000586638 MSH5O43196 834 aa12.95□□□□□ -0.34
APOC1-201ENST00000586638 CHD4Q14839 1912 aa12.95□□□□□ -0.34
APOC1-201ENST00000586638 GRIN3BO60391 1043 aa12.94□□□□□ -0.34
APOC1-201ENST00000586638 GIGYF1O75420 1035 aaPredicted RBP12.94□□□□□ -0.34
APOC1-201ENST00000586638 NLGN2Q8NFZ4 835 aa12.94□□□□□ -0.34
APOC1-201ENST00000586638 DCAF5Q96JK2 942 aa12.94□□□□□ -0.34
APOC1-201ENST00000586638 API5Q9BZZ5 524 aaKnown RBP12.94□□□□□ -0.34
APOC1-201ENST00000586638 SOS1Q07889 1333 aaPredicted RBP12.93□□□□□ -0.34
APOC1-201ENST00000586638 KDM2BQ8NHM5 1336 aa12.93□□□□□ -0.34
APOC1-201ENST00000586638 HSP90AB1P08238 724 aaKnown RBP12.93□□□□□ -0.34
APOC1-201ENST00000586638 HDGFL1Q5TGJ6 251 aa12.93□□□□□ -0.34
APOC1-201ENST00000586638 ARHGAP45Q92619 1136 aa12.93□□□□□ -0.34
APOC1-201ENST00000586638 CCNL1Q9UK58 526 aaPredicted RBP12.93□□□□□ -0.34
APOC1-201ENST00000586638 SLC39A6Q13433 755 aa12.92□□□□□ -0.34
APOC1-201ENST00000586638 CCDC30Q5VVM6 783 aa12.92□□□□□ -0.34
APOC1-201ENST00000586638 G2E3Q7L622 706 aa12.92□□□□□ -0.34
APOC1-201ENST00000586638 STK31Q9BXU1 1019 aa12.92□□□□□ -0.34
APOC1-201ENST00000586638 DDX19BQ9UMR2 479 aa12.92□□□□□ -0.34
APOC1-201ENST00000586638 KCPQ6ZWJ8 1503 aa12.92□□□□□ -0.34
APOC1-201ENST00000586638 HEG1Q9ULI3 1381 aa12.92□□□□□ -0.34
APOC1-201ENST00000586638 PTPRCP08575 1304 aa12.91□□□□□ -0.34
APOC1-201ENST00000586638 BTAF1O14981 1849 aa12.91□□□□□ -0.34
APOC1-201ENST00000586638 SLC4A2P04920 1241 aa12.91□□□□□ -0.34
APOC1-201ENST00000586638 COL23A1Q86Y22 540 aaPredicted RBP12.91□□□□□ -0.34
APOC1-201ENST00000586638 PRAMEF22A3QJZ6 481 aa12.9□□□□□ -0.34
APOC1-201ENST00000586638 HOXB7P09629 217 aa12.9□□□□□ -0.34
APOC1-201ENST00000586638 EIF2S2P20042 333 aaKnown RBP12.9□□□□□ -0.34
APOC1-201ENST00000586638 HMGB2P26583 209 aaKnown RBP12.9□□□□□ -0.34
APOC1-201ENST00000586638 CABP4P57796 275 aa12.9□□□□□ -0.34
APOC1-201ENST00000586638 NFATC2IPQ8NCF5 419 aa12.9□□□□□ -0.34
APOC1-201ENST00000586638 PCDHB15Q9Y5E8 787 aa12.9□□□□□ -0.34
APOC1-201ENST00000586638 PXDNLA1KZ92 1463 aa12.9□□□□□ -0.34
APOC1-201ENST00000586638 YBX3P16989 372 aaKnown RBP eCLIP12.89□□□□□ -0.35
APOC1-201ENST00000586638 NKX1-1Q15270 411 aaPredicted RBP12.89□□□□□ -0.35
APOC1-201ENST00000586638 CENPQQ7L2Z9 268 aaPredicted RBP12.89□□□□□ -0.35
APOC1-201ENST00000586638 KAT6BQ8WYB5 2073 aa12.89□□□□□ -0.35
APOC1-201ENST00000586638 F6X3S4 739 aa12.88□□□□□ -0.35
APOC1-201ENST00000586638 IGHDP01880 384 aa12.88□□□□□ -0.35
APOC1-201ENST00000586638 ANXA1P04083 346 aa12.88□□□□□ -0.35
APOC1-201ENST00000586638 FLIIQ13045 1269 aa12.88□□□□□ -0.35
APOC1-201ENST00000586638 AAMPQ13685 434 aa12.88□□□□□ -0.35
APOC1-201ENST00000586638 MSL1Q68DK7 614 aa12.88□□□□□ -0.35
APOC1-201ENST00000586638 ZNF790Q6PG37 636 aa12.88□□□□□ -0.35
APOC1-201ENST00000586638 SKAP1Q86WV1 359 aa12.88□□□□□ -0.35
APOC1-201ENST00000586638 FLAD1Q8NFF5 587 aa12.88□□□□□ -0.35
APOC1-201ENST00000586638 CHPF2Q9P2E5 772 aa12.88□□□□□ -0.35
APOC1-201ENST00000586638 TTC5Q8N0Z6 440 aa12.87□□□□□ -0.35
APOC1-201ENST00000586638 ZNF496Q96IT1 587 aaPredicted RBP12.87□□□□□ -0.35
APOC1-201ENST00000586638 ERVV-2B6SEH9 535 aa12.86□□□□□ -0.35
APOC1-201ENST00000586638 FKBP5Q13451 457 aaPredicted RBP12.86□□□□□ -0.35
APOC1-201ENST00000586638 C1orf115Q9H7X2 142 aa12.86□□□□□ -0.35
APOC1-201ENST00000586638 PHAXQ9H814 394 aaKnown RBP12.86□□□□□ -0.35
APOC1-201ENST00000586638 ZBTB40Q9NUA8 1239 aa12.86□□□□□ -0.35
APOC1-201ENST00000586638 CD2APQ9Y5K6 639 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms