RNA–Protein interactions for RNA: ENST00000584558.5

ITGB4-212, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-212ENST00000584558 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.5■□□□□ 0.07
ITGB4-212ENST00000584558 GPT2Q8TD30 523 aa15.5■□□□□ 0.07
ITGB4-212ENST00000584558 ZBTB40Q9NUA8 1239 aa15.5■□□□□ 0.07
ITGB4-212ENST00000584558 ABCC4O15439 1325 aa15.5■□□□□ 0.07
ITGB4-212ENST00000584558 KRT24Q2M2I5 525 aa15.49■□□□□ 0.07
ITGB4-212ENST00000584558 LRSAM1Q6UWE0 723 aa15.49■□□□□ 0.07
ITGB4-212ENST00000584558 LTV1Q96GA3 475 aaPredicted RBP15.49■□□□□ 0.07
ITGB4-212ENST00000584558 CRYBG1Q9Y4K1 1723 aa15.49■□□□□ 0.07
ITGB4-212ENST00000584558 NUCB2P80303 420 aa15.49■□□□□ 0.07
ITGB4-212ENST00000584558 NBPF6Q5VWK0 638 aa15.49■□□□□ 0.07
ITGB4-212ENST00000584558 NBPF4Q96M43 638 aa15.49■□□□□ 0.07
ITGB4-212ENST00000584558 SLAIN2Q9P270 581 aa15.49■□□□□ 0.07
ITGB4-212ENST00000584558 LMO7Q8WWI1 1683 aa15.48■□□□□ 0.07
ITGB4-212ENST00000584558 MAP3K5Q99683 1374 aa15.48■□□□□ 0.07
ITGB4-212ENST00000584558 TMEM63CQ9P1W3 806 aa15.48■□□□□ 0.07
ITGB4-212ENST00000584558 VGLL3A8MV65 326 aa15.48■□□□□ 0.07
ITGB4-212ENST00000584558 CHAMP1Q96JM3 812 aa15.48■□□□□ 0.07
ITGB4-212ENST00000584558 RGS12O14924 1447 aa15.48■□□□□ 0.07
ITGB4-212ENST00000584558 NUCB1Q02818 461 aa15.47■□□□□ 0.07
ITGB4-212ENST00000584558 TBC1D9Q6ZT07 1266 aa15.47■□□□□ 0.07
ITGB4-212ENST00000584558 CHD1LQ86WJ1 897 aa15.47■□□□□ 0.07
ITGB4-212ENST00000584558 USHBP1Q8N6Y0 703 aa15.47■□□□□ 0.07
ITGB4-212ENST00000584558 RGPD5Q99666 1765 aa15.47■□□□□ 0.07
ITGB4-212ENST00000584558 GNAT3A8MTJ3 354 aa15.47■□□□□ 0.07
ITGB4-212ENST00000584558 RTF1Q92541 710 aaKnown RBP15.47■□□□□ 0.07
ITGB4-212ENST00000584558 PRIMPOLQ96LW4 560 aa15.47■□□□□ 0.07
ITGB4-212ENST00000584558 ZNF830Q96NB3 372 aaPredicted RBP15.47■□□□□ 0.07
ITGB4-212ENST00000584558 TMEM51Q9NW97 253 aa15.47■□□□□ 0.07
ITGB4-212ENST00000584558 PXDNQ92626 1479 aa15.46■□□□□ 0.07
ITGB4-212ENST00000584558 HMGN5P82970 282 aaKnown RBP15.46■□□□□ 0.07
ITGB4-212ENST00000584558 BMP2KLQ5H9B9 411 aa15.46■□□□□ 0.07
ITGB4-212ENST00000584558 KIF3AQ9Y496 699 aa15.46■□□□□ 0.07
ITGB4-212ENST00000584558 PDIA4P13667 645 aaKnown RBP15.46■□□□□ 0.07
ITGB4-212ENST00000584558 CGNQ9P2M7 1197 aaKnown RBP15.46■□□□□ 0.07
ITGB4-212ENST00000584558 COL18A1P39060 1754 aa15.46■□□□□ 0.06
ITGB4-212ENST00000584558 ZBTB7BO15156 539 aaPredicted RBP15.46■□□□□ 0.06
ITGB4-212ENST00000584558 IL17REQ8NFR9 667 aa15.46■□□□□ 0.06
ITGB4-212ENST00000584558 NSFL1CQ9UNZ2 370 aaKnown RBP15.46■□□□□ 0.06
ITGB4-212ENST00000584558 LTBP4Q8N2S1 1624 aa15.45■□□□□ 0.06
ITGB4-212ENST00000584558 FOXD4L5Q5VV16 416 aaPredicted RBP15.45■□□□□ 0.06
ITGB4-212ENST00000584558 C17orf53Q8N3J3 647 aaPredicted RBP15.45■□□□□ 0.06
ITGB4-212ENST00000584558 FOXD4L4Q8WXT5 416 aaPredicted RBP15.45■□□□□ 0.06
ITGB4-212ENST00000584558 MIS18AQ9NYP9 233 aa15.45■□□□□ 0.06
ITGB4-212ENST00000584558 FAM208AQ9UK61 1670 aaKnown RBP15.45■□□□□ 0.06
ITGB4-212ENST00000584558 BRINP3Q76B58 766 aa15.45■□□□□ 0.06
ITGB4-212ENST00000584558 ANKRD45Q5TZF3 282 aa15.44■□□□□ 0.06
ITGB4-212ENST00000584558 CADPS2Q86UW7 1296 aa15.44■□□□□ 0.06
ITGB4-212ENST00000584558 PDCL2Q8N4E4 241 aa15.44■□□□□ 0.06
ITGB4-212ENST00000584558 CEMIPQ8WUJ3 1361 aa15.44■□□□□ 0.06
ITGB4-212ENST00000584558 ZBTB22O15209 634 aa15.44■□□□□ 0.06
ITGB4-212ENST00000584558 HAP1P54257 671 aaPredicted RBP15.44■□□□□ 0.06
ITGB4-212ENST00000584558 CABLES1Q8TDN4 633 aa15.44■□□□□ 0.06
ITGB4-212ENST00000584558 BCL2L12Q9HB09 334 aa15.44■□□□□ 0.06
ITGB4-212ENST00000584558 LRRC59Q96AG4 307 aaKnown RBP15.43■□□□□ 0.06
ITGB4-212ENST00000584558 API5Q9BZZ5 524 aaKnown RBP15.43■□□□□ 0.06
ITGB4-212ENST00000584558 TSPYL4Q9UJ04 414 aa15.43■□□□□ 0.06
ITGB4-212ENST00000584558 NOLC1Q14978 699 aaKnown RBP eCLIP15.43■□□□□ 0.06
ITGB4-212ENST00000584558 ZNF771Q7L3S4 317 aaPredicted RBP15.43■□□□□ 0.06
ITGB4-212ENST00000584558 AXIN2Q9Y2T1 843 aa15.43■□□□□ 0.06
ITGB4-212ENST00000584558 KDM3BQ7LBC6 1761 aa15.43■□□□□ 0.06
ITGB4-212ENST00000584558 UBAP1LF5GYI3 381 aa15.42■□□□□ 0.06
ITGB4-212ENST00000584558 CYP2E1P05181 493 aaPredicted RBP15.42■□□□□ 0.06
ITGB4-212ENST00000584558 U2AF2P26368 475 aaKnown RBP eCLIP15.42■□□□□ 0.06
ITGB4-212ENST00000584558 BABAM1Q9NWV8 329 aa15.42■□□□□ 0.06
ITGB4-212ENST00000584558 TNS3Q68CZ2 1445 aa15.42■□□□□ 0.06
ITGB4-212ENST00000584558 GTF2F1P35269 517 aaKnown RBP eCLIP15.42■□□□□ 0.06
ITGB4-212ENST00000584558 ZGPATQ8N5A5 531 aaKnown RBP15.42■□□□□ 0.06
ITGB4-212ENST00000584558 ANKRD24Q8TF21 1146 aa15.41■□□□□ 0.06
ITGB4-212ENST00000584558 PIBF1Q8WXW3 757 aa15.41■□□□□ 0.06
ITGB4-212ENST00000584558 ADAMTS7Q9UKP4 1686 aa15.41■□□□□ 0.06
ITGB4-212ENST00000584558 ABCC6O95255 1503 aa15.41■□□□□ 0.06
ITGB4-212ENST00000584558 CDK11BP21127 795 aaKnown RBP15.41■□□□□ 0.06
ITGB4-212ENST00000584558 TTC12Q9H892 705 aaPredicted RBP15.41■□□□□ 0.06
ITGB4-212ENST00000584558 NPHP3Q7Z494 1330 aa15.41■□□□□ 0.06
ITGB4-212ENST00000584558 INTS3Q68E01 1043 aaKnown RBP15.4■□□□□ 0.06
ITGB4-212ENST00000584558 RABEP1Q15276 862 aa15.4■□□□□ 0.06
ITGB4-212ENST00000584558 TSPY26PQ9H489 355 aa15.4■□□□□ 0.06
ITGB4-212ENST00000584558 PTPRCP08575 1304 aa15.39■□□□□ 0.05
ITGB4-212ENST00000584558 TAF7Q15545 349 aaPredicted RBP15.39■□□□□ 0.05
ITGB4-212ENST00000584558 PLCD3Q8N3E9 789 aa15.39■□□□□ 0.05
ITGB4-212ENST00000584558 IPO4Q8TEX9 1081 aaKnown RBP15.38■□□□□ 0.05
ITGB4-212ENST00000584558 ERBB3P21860 1342 aa15.38■□□□□ 0.05
ITGB4-212ENST00000584558 OVOS2A0A0G2JMS6 1433 aa15.38■□□□□ 0.05
ITGB4-212ENST00000584558 SIPA1L3O60292 1781 aaPredicted RBP15.38■□□□□ 0.05
ITGB4-212ENST00000584558 SOS1Q07889 1333 aaPredicted RBP15.38■□□□□ 0.05
ITGB4-212ENST00000584558 TAF3Q5VWG9 929 aa15.38■□□□□ 0.05
ITGB4-212ENST00000584558 SPATA31A3Q5VYP0 1347 aa15.38■□□□□ 0.05
ITGB4-212ENST00000584558 CDC45O75419 566 aa15.38■□□□□ 0.05
ITGB4-212ENST00000584558 CERKQ8TCT0 537 aa15.38■□□□□ 0.05
ITGB4-212ENST00000584558 ZDHHC9Q9Y397 364 aa15.38■□□□□ 0.05
ITGB4-212ENST00000584558 N4BP2Q86UW6 1770 aaPredicted RBP15.37■□□□□ 0.05
ITGB4-212ENST00000584558 MAPK8IP2Q13387 824 aaPredicted RBP15.37■□□□□ 0.05
ITGB4-212ENST00000584558 AKAP4Q5JQC9 854 aa15.37■□□□□ 0.05
ITGB4-212ENST00000584558 C1orf115Q9H7X2 142 aa15.37■□□□□ 0.05
ITGB4-212ENST00000584558 USP25Q9UHP3 1055 aa15.37■□□□□ 0.05
ITGB4-212ENST00000584558 CACNA1FO60840 1977 aa15.36■□□□□ 0.05
ITGB4-212ENST00000584558 MBD3O95983 291 aa15.36■□□□□ 0.05
ITGB4-212ENST00000584558 SLC4A2P04920 1241 aa15.36■□□□□ 0.05
ITGB4-212ENST00000584558 SIRT2Q8IXJ6 389 aa15.36■□□□□ 0.05
ITGB4-212ENST00000584558 LGR6Q9HBX8 967 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms