RNA–Protein interactions for RNA: ENST00000584472.5

CSNK1D-223, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-223ENST00000584472 GNPATO15228 680 aa20.89■□□□□ 0.93
CSNK1D-223ENST00000584472 ZNF496Q96IT1 587 aaPredicted RBP20.89■□□□□ 0.93
CSNK1D-223ENST00000584472 FMNL2Q96PY5 1086 aa20.89■□□□□ 0.93
CSNK1D-223ENST00000584472 CD2APQ9Y5K6 639 aa20.89■□□□□ 0.93
CSNK1D-223ENST00000584472 DNAJC10Q8IXB1 793 aa20.88■□□□□ 0.93
CSNK1D-223ENST00000584472 THUMPD2Q9BTF0 503 aaKnown RBP20.88■□□□□ 0.93
CSNK1D-223ENST00000584472 CHD4Q14839 1912 aa20.87■□□□□ 0.93
CSNK1D-223ENST00000584472 CRKLP46109 303 aaKnown RBP20.87■□□□□ 0.93
CSNK1D-223ENST00000584472 AMIGO3Q86WK7 504 aa20.87■□□□□ 0.93
CSNK1D-223ENST00000584472 WWC1Q8IX03 1113 aa20.87■□□□□ 0.93
CSNK1D-223ENST00000584472 TEX13AQ9BXU3 409 aaPredicted RBP20.87■□□□□ 0.93
CSNK1D-223ENST00000584472 CYP19A1P11511 503 aaPredicted RBP20.86■□□□□ 0.93
CSNK1D-223ENST00000584472 RTCBQ9Y3I0 505 aaKnown RBP20.86■□□□□ 0.93
CSNK1D-223ENST00000584472 ZNF521Q96K83 1311 aa20.85■□□□□ 0.93
CSNK1D-223ENST00000584472 KCNQ3O43525 872 aa20.85■□□□□ 0.93
CSNK1D-223ENST00000584472 RPS6KA4O75676 772 aa20.85■□□□□ 0.93
CSNK1D-223ENST00000584472 STARD3NLO95772 234 aa20.85■□□□□ 0.93
CSNK1D-223ENST00000584472 CCDC87Q9NVE4 849 aa20.85■□□□□ 0.93
CSNK1D-223ENST00000584472 BABAM1Q9NWV8 329 aa20.85■□□□□ 0.93
CSNK1D-223ENST00000584472 PHF14O94880 888 aa20.84■□□□□ 0.93
CSNK1D-223ENST00000584472 INTS5Q6P9B9 1019 aaKnown RBP20.84■□□□□ 0.93
CSNK1D-223ENST00000584472 MSL1Q68DK7 614 aa20.83■□□□□ 0.93
CSNK1D-223ENST00000584472 YTHDC1Q96MU7 727 aaKnown RBP20.83■□□□□ 0.93
CSNK1D-223ENST00000584472 ZBED9Q6R2W3 1325 aa20.82■□□□□ 0.92
CSNK1D-223ENST00000584472 C4AP0C0L4 1744 aa20.82■□□□□ 0.92
CSNK1D-223ENST00000584472 TRAPPC3LQ5T215 181 aa20.82■□□□□ 0.92
CSNK1D-223ENST00000584472 GRIN3BO60391 1043 aa20.81■□□□□ 0.92
CSNK1D-223ENST00000584472 SNRPA1P09661 255 aaKnown RBP20.81■□□□□ 0.92
CSNK1D-223ENST00000584472 GPR162Q16538 588 aa20.81■□□□□ 0.92
CSNK1D-223ENST00000584472 WDR63Q8IWG1 891 aa20.81■□□□□ 0.92
CSNK1D-223ENST00000584472 NLGN1Q8N2Q7 840 aa20.81■□□□□ 0.92
CSNK1D-223ENST00000584472 NLGN2Q8NFZ4 835 aa20.81■□□□□ 0.92
CSNK1D-223ENST00000584472 MIS18AQ9NYP9 233 aa20.81■□□□□ 0.92
CSNK1D-223ENST00000584472 LAMB4A4D0S4 1761 aa20.8■□□□□ 0.92
CSNK1D-223ENST00000584472 CALD1Q05682 793 aaKnown RBP20.8■□□□□ 0.92
CSNK1D-223ENST00000584472 KLHL34Q8N239 644 aa20.8■□□□□ 0.92
CSNK1D-223ENST00000584472 SOS1Q07889 1333 aaPredicted RBP20.79■□□□□ 0.92
CSNK1D-223ENST00000584472 SMIM5Q71RC9 77 aa20.79■□□□□ 0.92
CSNK1D-223ENST00000584472 TSPYL4Q9UJ04 414 aa20.79■□□□□ 0.92
CSNK1D-223ENST00000584472 IL16Q14005 1332 aa20.78■□□□□ 0.92
CSNK1D-223ENST00000584472 EIF4A1P60842 406 aaKnown RBP20.78■□□□□ 0.92
CSNK1D-223ENST00000584472 ARHGEF1Q92888 912 aaKnown RBP20.78■□□□□ 0.92
CSNK1D-223ENST00000584472 ZBTB1Q9Y2K1 713 aa20.78■□□□□ 0.92
CSNK1D-223ENST00000584472 CHL1O00533 1208 aa20.77■□□□□ 0.92
CSNK1D-223ENST00000584472 RFC4P35249 363 aa20.77■□□□□ 0.92
CSNK1D-223ENST00000584472 KIF13BQ9NQT8 1826 aa20.76■□□□□ 0.91
CSNK1D-223ENST00000584472 COL15A1P39059 1388 aa20.76■□□□□ 0.91
CSNK1D-223ENST00000584472 GOLGA2Q08379 1002 aa20.76■□□□□ 0.91
CSNK1D-223ENST00000584472 IFT57Q9NWB7 429 aa20.76■□□□□ 0.91
CSNK1D-223ENST00000584472 GIGYF1O75420 1035 aaPredicted RBP20.75■□□□□ 0.91
CSNK1D-223ENST00000584472 ZNF853P0CG23 659 aa20.75■□□□□ 0.91
CSNK1D-223ENST00000584472 CFAP44Q96MT7 982 aa20.75■□□□□ 0.91
CSNK1D-223ENST00000584472 USP16Q9Y5T5 823 aa20.75■□□□□ 0.91
CSNK1D-223ENST00000584472 USP42Q9H9J4 1324 aaKnown RBP20.75■□□□□ 0.91
CSNK1D-223ENST00000584472 EIF5P55010 431 aaKnown RBP20.74■□□□□ 0.91
CSNK1D-223ENST00000584472 GNAI1P63096 354 aa20.74■□□□□ 0.91
CSNK1D-223ENST00000584472 SPINK5Q9NQ38 1064 aaPredicted RBP20.74■□□□□ 0.91
CSNK1D-223ENST00000584472 LAS1LQ9Y4W2 734 aaKnown RBP20.74■□□□□ 0.91
CSNK1D-223ENST00000584472 PRAMEF22A3QJZ6 481 aa20.73■□□□□ 0.91
CSNK1D-223ENST00000584472 MMP10P09238 476 aa20.73■□□□□ 0.91
CSNK1D-223ENST00000584472 GYS1P13807 737 aa20.73■□□□□ 0.91
CSNK1D-223ENST00000584472 CANXP27824 592 aaKnown RBP20.73■□□□□ 0.91
CSNK1D-223ENST00000584472 IL6STP40189 918 aaPredicted RBP20.73■□□□□ 0.91
CSNK1D-223ENST00000584472 ZNF784Q8NCA9 323 aaPredicted RBP20.73■□□□□ 0.91
CSNK1D-223ENST00000584472 A0A087WZG4 1122 aa20.72■□□□□ 0.91
CSNK1D-223ENST00000584472 A1BGP04217 495 aa20.72■□□□□ 0.91
CSNK1D-223ENST00000584472 YBX3P16989 372 aaKnown RBP eCLIP20.72■□□□□ 0.912e-6■■■□□ 17
CSNK1D-223ENST00000584472 CDCA7LQ96GN5 454 aa20.72■□□□□ 0.91
CSNK1D-223ENST00000584472 C10orf71Q711Q0 1435 aa20.71■□□□□ 0.91
CSNK1D-223ENST00000584472 E9PSI1 815 aa20.71■□□□□ 0.91
CSNK1D-223ENST00000584472 SLFN5Q08AF3 891 aa20.71■□□□□ 0.91
CSNK1D-223ENST00000584472 NARFQ9UHQ1 456 aa20.71■□□□□ 0.91
CSNK1D-223ENST00000584472 ZPR1O75312 459 aa20.7■□□□□ 0.9
CSNK1D-223ENST00000584472 TGFB2P61812 414 aa20.7■□□□□ 0.9
CSNK1D-223ENST00000584472 MBIPQ9NS73 344 aa20.7■□□□□ 0.9
CSNK1D-223ENST00000584472 SCN7AQ01118 1682 aa20.7■□□□□ 0.9
CSNK1D-223ENST00000584472 NPM2Q86SE8 214 aaKnown RBP20.69■□□□□ 0.9
CSNK1D-223ENST00000584472 TRMT2AQ8IZ69 625 aaKnown RBP20.69■□□□□ 0.9
CSNK1D-223ENST00000584472 MYH16Q9H6N6 1097 aa20.69■□□□□ 0.9
CSNK1D-223ENST00000584472 SRP68Q9UHB9 627 aaKnown RBP20.69■□□□□ 0.9
CSNK1D-223ENST00000584472 ERBB4Q15303 1308 aa20.69■□□□□ 0.9
CSNK1D-223ENST00000584472 PELP1Q8IZL8 1130 aaKnown RBP20.68■□□□□ 0.9
CSNK1D-223ENST00000584472 TSR2Q969E8 191 aaKnown RBP20.68■□□□□ 0.9
CSNK1D-223ENST00000584472 FANCIQ9NVI1 1328 aa20.68■□□□□ 0.9
CSNK1D-223ENST00000584472 NBPF26B4DH59 902 aa20.67■□□□□ 0.9
CSNK1D-223ENST00000584472 HOXB7P09629 217 aa20.67■□□□□ 0.9
CSNK1D-223ENST00000584472 NBPF10Q6P3W6 841 aaKnown RBP20.67■□□□□ 0.9
CSNK1D-223ENST00000584472 NBPF15Q8N660 670 aa20.67■□□□□ 0.9
CSNK1D-223ENST00000584472 PXDNLA1KZ92 1463 aa20.67■□□□□ 0.9
CSNK1D-223ENST00000584472 KIAA1551Q9HCM1 1747 aa20.67■□□□□ 0.9
CSNK1D-223ENST00000584472 USPL1Q5W0Q7 1092 aa20.66■□□□□ 0.9
CSNK1D-223ENST00000584472 PARP3Q9Y6F1 533 aa20.66■□□□□ 0.9
CSNK1D-223ENST00000584472 BCORQ6W2J9 1755 aa20.66■□□□□ 0.9
CSNK1D-223ENST00000584472 FKBP8Q14318 412 aa20.65■□□□□ 0.9
CSNK1D-223ENST00000584472 DUSP27Q5VZP5 1158 aa20.65■□□□□ 0.9
CSNK1D-223ENST00000584472 ZNF330Q9Y3S2 320 aaPredicted RBP20.65■□□□□ 0.9
CSNK1D-223ENST00000584472 PIP4K2AP48426 406 aaPredicted RBP20.64■□□□□ 0.89
CSNK1D-223ENST00000584472 RGL2O15211 777 aa20.63■□□□□ 0.89
CSNK1D-223ENST00000584472 DZIP3Q86Y13 1208 aaKnown RBP20.63■□□□□ 0.89
CSNK1D-223ENST00000584472 TM4SF1P30408 202 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms