RNA–Protein interactions for RNA: ENST00000584374.1

ITGB4-211, Transcript of integrin subunit beta 4, humanhuman

TSL 3

Gene ITGB4, Length 950 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-211ENST00000584374 ZBTB1Q9Y2K1 713 aa22.39■■□□□ 1.17
ITGB4-211ENST00000584374 USP42Q9H9J4 1324 aaKnown RBP22.37■■□□□ 1.17
ITGB4-211ENST00000584374 KLHL34Q8N239 644 aa22.37■■□□□ 1.17
ITGB4-211ENST00000584374 SRP68Q9UHB9 627 aaKnown RBP22.37■■□□□ 1.17
ITGB4-211ENST00000584374 RFC4P35249 363 aa22.36■■□□□ 1.17
ITGB4-211ENST00000584374 FMNL2Q96PY5 1086 aa22.36■■□□□ 1.17
ITGB4-211ENST00000584374 GOLGB1Q14789 3259 aaKnown RBP22.35■■□□□ 1.17
ITGB4-211ENST00000584374 MMP10P09238 476 aa22.35■■□□□ 1.17
ITGB4-211ENST00000584374 RUNDC1Q96C34 613 aa22.35■■□□□ 1.17
ITGB4-211ENST00000584374 CD2APQ9Y5K6 639 aa22.35■■□□□ 1.17
ITGB4-211ENST00000584374 NLGN1Q8N2Q7 840 aa22.34■■□□□ 1.17
ITGB4-211ENST00000584374 THUMPD2Q9BTF0 503 aaKnown RBP22.34■■□□□ 1.17
ITGB4-211ENST00000584374 COL15A1P39059 1388 aa22.34■■□□□ 1.17
ITGB4-211ENST00000584374 PRAMEF22A3QJZ6 481 aa22.33■■□□□ 1.17
ITGB4-211ENST00000584374 CCDC146Q8IYE0 955 aa22.33■■□□□ 1.17
ITGB4-211ENST00000584374 STARD3NLO95772 234 aa22.32■■□□□ 1.16
ITGB4-211ENST00000584374 FKBP8Q14318 412 aa22.32■■□□□ 1.16
ITGB4-211ENST00000584374 TAF7Q15545 349 aaPredicted RBP22.32■■□□□ 1.16
ITGB4-211ENST00000584374 KDM3BQ7LBC6 1761 aa22.32■■□□□ 1.16
ITGB4-211ENST00000584374 EIF5P55010 431 aaKnown RBP22.31■■□□□ 1.16
ITGB4-211ENST00000584374 TEX13AQ9BXU3 409 aaPredicted RBP22.31■■□□□ 1.16
ITGB4-211ENST00000584374 MIS18AQ9NYP9 233 aa22.31■■□□□ 1.16
ITGB4-211ENST00000584374 CANXP27824 592 aaKnown RBP22.3■■□□□ 1.16
ITGB4-211ENST00000584374 TMPOP42166 694 aaKnown RBP22.3■■□□□ 1.16
ITGB4-211ENST00000584374 BCL2L12Q9HB09 334 aa22.3■■□□□ 1.16
ITGB4-211ENST00000584374 USP16Q9Y5T5 823 aa22.3■■□□□ 1.16
ITGB4-211ENST00000584374 C10orf71Q711Q0 1435 aa22.3■■□□□ 1.16
ITGB4-211ENST00000584374 KIF13BQ9NQT8 1826 aa22.29■■□□□ 1.16
ITGB4-211ENST00000584374 KIAA1551Q9HCM1 1747 aa22.29■■□□□ 1.16
ITGB4-211ENST00000584374 DDR1Q08345 913 aa22.29■■□□□ 1.16
ITGB4-211ENST00000584374 USPL1Q5W0Q7 1092 aa22.29■■□□□ 1.16
ITGB4-211ENST00000584374 NARFQ9UHQ1 456 aa22.29■■□□□ 1.16
ITGB4-211ENST00000584374 A1BGP04217 495 aa22.28■■□□□ 1.16
ITGB4-211ENST00000584374 RIPK4P57078 832 aa22.28■■□□□ 1.16
ITGB4-211ENST00000584374 DCAF8L1A6NGE4 600 aa22.27■■□□□ 1.16
ITGB4-211ENST00000584374 YBX3P16989 372 aaKnown RBP eCLIP22.27■■□□□ 1.16
ITGB4-211ENST00000584374 TM4SF1P30408 202 aa22.27■■□□□ 1.16
ITGB4-211ENST00000584374 SNRPA1P09661 255 aaKnown RBP22.26■■□□□ 1.15
ITGB4-211ENST00000584374 RRP7AQ9Y3A4 280 aaKnown RBP22.26■■□□□ 1.15
ITGB4-211ENST00000584374 PXDNLA1KZ92 1463 aa22.26■■□□□ 1.15
ITGB4-211ENST00000584374 SCN7AQ01118 1682 aa22.26■■□□□ 1.15
ITGB4-211ENST00000584374 ZPR1O75312 459 aa22.25■■□□□ 1.15
ITGB4-211ENST00000584374 IL6STP40189 918 aaPredicted RBP22.25■■□□□ 1.15
ITGB4-211ENST00000584374 POLRMTO00411 1230 aaKnown RBP22.24■■□□□ 1.15
ITGB4-211ENST00000584374 EIF4A1P60842 406 aaKnown RBP22.24■■□□□ 1.15
ITGB4-211ENST00000584374 LMOD3Q0VAK6 560 aa22.24■■□□□ 1.15
ITGB4-211ENST00000584374 NGEFQ8N5V2 710 aa22.24■■□□□ 1.15
ITGB4-211ENST00000584374 TRIM35Q9UPQ4 493 aa22.24■■□□□ 1.15
ITGB4-211ENST00000584374 LAMB4A4D0S4 1761 aa22.23■■□□□ 1.15
ITGB4-211ENST00000584374 APAF1O14727 1248 aa22.23■■□□□ 1.15
ITGB4-211ENST00000584374 PIP4K2AP48426 406 aaPredicted RBP22.23■■□□□ 1.15
ITGB4-211ENST00000584374 GPR162Q16538 588 aa22.23■■□□□ 1.15
ITGB4-211ENST00000584374 PARP3Q9Y6F1 533 aa22.23■■□□□ 1.15
ITGB4-211ENST00000584374 NBPF26B4DH59 902 aa22.22■■□□□ 1.15
ITGB4-211ENST00000584374 HNRNPUQ00839 825 aaKnown RBP eCLIP22.22■■□□□ 1.15
ITGB4-211ENST00000584374 NFIXQ14938 502 aa22.22■■□□□ 1.15
ITGB4-211ENST00000584374 NEUROD2Q15784 382 aa22.22■■□□□ 1.15
ITGB4-211ENST00000584374 NBPF10Q6P3W6 841 aaKnown RBP22.22■■□□□ 1.15
ITGB4-211ENST00000584374 NBPF15Q8N660 670 aa22.22■■□□□ 1.15
ITGB4-211ENST00000584374 NRXN2Q9P2S2 1712 aa22.21■■□□□ 1.15
ITGB4-211ENST00000584374 GIGYF1O75420 1035 aaPredicted RBP22.21■■□□□ 1.15
ITGB4-211ENST00000584374 A0A087WZG4 1122 aa22.2■■□□□ 1.14
ITGB4-211ENST00000584374 YY1P25490 414 aa22.2■■□□□ 1.14
ITGB4-211ENST00000584374 PELP1Q8IZL8 1130 aaKnown RBP22.2■■□□□ 1.14
ITGB4-211ENST00000584374 TBC1D2BQ9UPU7 963 aa22.2■■□□□ 1.14
ITGB4-211ENST00000584374 BCORQ6W2J9 1755 aa22.2■■□□□ 1.14
ITGB4-211ENST00000584374 CAMTA2O94983 1202 aa22.19■■□□□ 1.14
ITGB4-211ENST00000584374 YTHDC1Q96MU7 727 aaKnown RBP22.19■■□□□ 1.14
ITGB4-211ENST00000584374 ZNF330Q9Y3S2 320 aaPredicted RBP22.19■■□□□ 1.14
ITGB4-211ENST00000584374 TGFB2P61812 414 aa22.18■■□□□ 1.14
ITGB4-211ENST00000584374 N4BP2Q86UW6 1770 aaPredicted RBP22.17■■□□□ 1.14
ITGB4-211ENST00000584374 BABAM1Q9NWV8 329 aa22.17■■□□□ 1.14
ITGB4-211ENST00000584374 TSPYL4Q9UJ04 414 aa22.17■■□□□ 1.14
ITGB4-211ENST00000584374 AFDNP55196 1824 aaKnown RBP22.16■■□□□ 1.14
ITGB4-211ENST00000584374 KCNA3P22001 575 aa22.16■■□□□ 1.14
ITGB4-211ENST00000584374 TBC1D9BQ66K14 1250 aa22.16■■□□□ 1.14
ITGB4-211ENST00000584374 WWC3Q9ULE0 1092 aa22.16■■□□□ 1.14
ITGB4-211ENST00000584374 SALL2Q9Y467 1007 aaPredicted RBP22.16■■□□□ 1.14
ITGB4-211ENST00000584374 A0A0G2JLW4 131 aa22.15■■□□□ 1.14
ITGB4-211ENST00000584374 DPEP1P16444 411 aa22.15■■□□□ 1.14
ITGB4-211ENST00000584374 NCBP3Q53F19 620 aaKnown RBP22.15■■□□□ 1.14
ITGB4-211ENST00000584374 DZIP3Q86Y13 1208 aaKnown RBP22.15■■□□□ 1.14
ITGB4-211ENST00000584374 BRCA1P38398 1863 aaKnown RBP22.14■■□□□ 1.13
ITGB4-211ENST00000584374 CHL1O00533 1208 aa22.14■■□□□ 1.13
ITGB4-211ENST00000584374 CALD1Q05682 793 aaKnown RBP22.14■■□□□ 1.13
ITGB4-211ENST00000584374 CARMIL3Q8ND23 1372 aa22.13■■□□□ 1.13
ITGB4-211ENST00000584374 SENP3-EIF4A1A0A087X0R7 540 aa22.13■■□□□ 1.13
ITGB4-211ENST00000584374 GRIN3BO60391 1043 aa22.13■■□□□ 1.13
ITGB4-211ENST00000584374 SERPINB2P05120 415 aa22.13■■□□□ 1.13
ITGB4-211ENST00000584374 CHD4Q14839 1912 aa22.13■■□□□ 1.13
ITGB4-211ENST00000584374 CCDC27Q2M243 656 aa22.12■■□□□ 1.13
ITGB4-211ENST00000584374 BICDL1Q6ZP65 573 aa22.12■■□□□ 1.13
ITGB4-211ENST00000584374 LRP10Q7Z4F1 713 aa22.11■■□□□ 1.13
ITGB4-211ENST00000584374 KRT24Q2M2I5 525 aa22.1■■□□□ 1.13
ITGB4-211ENST00000584374 RGL2O15211 777 aa22.09■■□□□ 1.13
ITGB4-211ENST00000584374 CHRNA5P30532 468 aa22.09■■□□□ 1.13
ITGB4-211ENST00000584374 PDIA6Q15084 440 aa22.09■■□□□ 1.13
ITGB4-211ENST00000584374 ZNF853P0CG23 659 aa22.08■■□□□ 1.13
ITGB4-211ENST00000584374 CLEC4GQ6UXB4 293 aa22.08■■□□□ 1.13
ITGB4-211ENST00000584374 NPM2Q86SE8 214 aaKnown RBP22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms