RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-227ENST00000583988 TNS4Q8IZW8 715 aa7.79□□□□□ -1.16
PPP4R1-227ENST00000583988 ABHD17AQ96GS6 310 aa7.79□□□□□ -1.16
PPP4R1-227ENST00000583988 CRISPLD1Q9H336 500 aa7.79□□□□□ -1.16
PPP4R1-227ENST00000583988 SCHIP1Q9P0W5 487 aaPredicted RBP7.79□□□□□ -1.16
PPP4R1-227ENST00000583988 MKRN1Q9UHC7 482 aaKnown RBP7.79□□□□□ -1.16
PPP4R1-227ENST00000583988 KIAA1024Q9UPX6 916 aa7.79□□□□□ -1.16
PPP4R1-227ENST00000583988 MARSP56192 900 aaKnown RBP7.78□□□□□ -1.16
PPP4R1-227ENST00000583988 UBAP2LQ14157 1087 aaKnown RBP7.78□□□□□ -1.16
PPP4R1-227ENST00000583988 CCDC102BQ68D86 513 aa7.78□□□□□ -1.16
PPP4R1-227ENST00000583988 OGFOD1Q8N543 542 aa7.78□□□□□ -1.16
PPP4R1-227ENST00000583988 C1orf216Q8TAB5 229 aa7.78□□□□□ -1.16
PPP4R1-227ENST00000583988 ACDQ96AP0 544 aa7.78□□□□□ -1.16
PPP4R1-227ENST00000583988 ZNF594Q96JF6 807 aaPredicted RBP7.78□□□□□ -1.16
PPP4R1-227ENST00000583988 DNAAF2Q9NVR5 837 aaKnown RBP7.78□□□□□ -1.16
PPP4R1-227ENST00000583988 ZBTB7BO15156 539 aaPredicted RBP7.77□□□□□ -1.17
PPP4R1-227ENST00000583988 BNIP3LO60238 219 aa7.77□□□□□ -1.17
PPP4R1-227ENST00000583988 BCRP11274 1271 aa7.77□□□□□ -1.17
PPP4R1-227ENST00000583988 TATP17735 454 aaPredicted RBP7.77□□□□□ -1.17
PPP4R1-227ENST00000583988 ZNF295-AS1Q8N0V1 137 aa7.77□□□□□ -1.17
PPP4R1-227ENST00000583988 ENAMQ9NRM1 1142 aa7.77□□□□□ -1.17
PPP4R1-227ENST00000583988 A0A1W2PNR3 127 aa7.76□□□□□ -1.17
PPP4R1-227ENST00000583988 MAP2K3P46734 347 aa7.76□□□□□ -1.17
PPP4R1-227ENST00000583988 CFAP70Q5T0N1 1121 aa7.76□□□□□ -1.17
PPP4R1-227ENST00000583988 FIGNL1Q6PIW4 674 aa7.76□□□□□ -1.17
PPP4R1-227ENST00000583988 BICDL1Q6ZP65 573 aa7.76□□□□□ -1.17
PPP4R1-227ENST00000583988 SLC9A9Q8IVB4 645 aa7.76□□□□□ -1.17
PPP4R1-227ENST00000583988 OXCT2Q9BYC2 517 aaPredicted RBP7.76□□□□□ -1.17
PPP4R1-227ENST00000583988 ZCCHC2Q9C0B9 1178 aaKnown RBP7.76□□□□□ -1.17
PPP4R1-227ENST00000583988 ATXN7L1Q9ULK2 861 aaPredicted RBP7.76□□□□□ -1.17
PPP4R1-227ENST00000583988 ZNF232Q9UNY5 417 aa7.76□□□□□ -1.17
PPP4R1-227ENST00000583988 MAFBQ9Y5Q3 323 aaPredicted RBP7.76□□□□□ -1.17
PPP4R1-227ENST00000583988 RNF225M0QZC1 329 aaPredicted RBP7.75□□□□□ -1.17
PPP4R1-227ENST00000583988 BMP4P12644 408 aa7.75□□□□□ -1.17
PPP4R1-227ENST00000583988 FGFR3P22607 806 aa7.75□□□□□ -1.17
PPP4R1-227ENST00000583988 LMOD1P29536 600 aaPredicted RBP7.75□□□□□ -1.17
PPP4R1-227ENST00000583988 TXLNAP40222 546 aa7.75□□□□□ -1.17
PPP4R1-227ENST00000583988 KCNMA1Q12791 1236 aa7.75□□□□□ -1.17
PPP4R1-227ENST00000583988 NEDD1Q8NHV4 660 aa7.75□□□□□ -1.17
PPP4R1-227ENST00000583988 L3MBTL2Q969R5 705 aa7.75□□□□□ -1.17
PPP4R1-227ENST00000583988 CCDC97Q96F63 343 aaPredicted RBP7.75□□□□□ -1.17
PPP4R1-227ENST00000583988 RBM19Q9Y4C8 960 aaKnown RBP7.75□□□□□ -1.17
PPP4R1-227ENST00000583988 GJA3Q9Y6H8 435 aa7.75□□□□□ -1.17
PPP4R1-227ENST00000583988 DCDC2BA2VCK2 349 aa7.74□□□□□ -1.17
PPP4R1-227ENST00000583988 ATXN7O15265 892 aaPredicted RBP7.74□□□□□ -1.17
PPP4R1-227ENST00000583988 RASA1P20936 1047 aa7.74□□□□□ -1.17
PPP4R1-227ENST00000583988 NOS2P35228 1153 aa7.74□□□□□ -1.17
PPP4R1-227ENST00000583988 EPHA4P54764 986 aa7.74□□□□□ -1.17
PPP4R1-227ENST00000583988 FOXK2Q01167 660 aa7.74□□□□□ -1.17
PPP4R1-227ENST00000583988 NLRP8Q86W28 1048 aa7.74□□□□□ -1.17
PPP4R1-227ENST00000583988 LARGE2Q8N3Y3 721 aa7.74□□□□□ -1.17
PPP4R1-227ENST00000583988 CCDC82Q8N4S0 544 aa7.74□□□□□ -1.17
PPP4R1-227ENST00000583988 ZDHHC1Q8WTX9 485 aa7.74□□□□□ -1.17
PPP4R1-227ENST00000583988 KLRG1Q96E93 195 aa7.74□□□□□ -1.17
PPP4R1-227ENST00000583988 ZDHHC3Q9NYG2 299 aa7.74□□□□□ -1.17
PPP4R1-227ENST00000583988 PCDHGC4Q9Y5F7 938 aa7.74□□□□□ -1.17
PPP4R1-227ENST00000583988 SFI1A8K8P3 1242 aa7.73□□□□□ -1.17
PPP4R1-227ENST00000583988 IRS1P35568 1242 aa7.73□□□□□ -1.17
PPP4R1-227ENST00000583988 CTBSQ01459 385 aa7.73□□□□□ -1.17
PPP4R1-227ENST00000583988 RASSF7Q02833 373 aa7.73□□□□□ -1.17
PPP4R1-227ENST00000583988 TEAD4Q15561 434 aa7.73□□□□□ -1.17
PPP4R1-227ENST00000583988 KANK4Q5T7N3 995 aaPredicted RBP7.73□□□□□ -1.17
PPP4R1-227ENST00000583988 TSEN2Q8NCE0 465 aaKnown RBP7.73□□□□□ -1.17
PPP4R1-227ENST00000583988 ZIC5Q96T25 663 aa7.73□□□□□ -1.17
PPP4R1-227ENST00000583988 TSPAN10Q9H1Z9 355 aaPredicted RBP7.73□□□□□ -1.17
PPP4R1-227ENST00000583988 NDFIP2Q9NV92 336 aa7.73□□□□□ -1.17
PPP4R1-227ENST00000583988 C2CD2LO14523 706 aa7.72□□□□□ -1.17
PPP4R1-227ENST00000583988 KHNYNO15037 678 aaKnown RBP7.72□□□□□ -1.17
PPP4R1-227ENST00000583988 GSK3AP49840 483 aa7.72□□□□□ -1.17
PPP4R1-227ENST00000583988 SRPK2P78362 688 aaKnown RBP7.72□□□□□ -1.17
PPP4R1-227ENST00000583988 SH3PXD2AQ5TCZ1 1133 aa7.72□□□□□ -1.17
PPP4R1-227ENST00000583988 SCARF2Q96GP6 870 aaPredicted RBP7.72□□□□□ -1.17
PPP4R1-227ENST00000583988 SERTM1A2A2V5 107 aa7.71□□□□□ -1.18
PPP4R1-227ENST00000583988 OIP5O43482 229 aa7.71□□□□□ -1.18
PPP4R1-227ENST00000583988 GDF11O95390 407 aa7.71□□□□□ -1.18
PPP4R1-227ENST00000583988 CD33P20138 364 aa7.71□□□□□ -1.18
PPP4R1-227ENST00000583988 LARP1Q6PKG0 1096 aaKnown RBP7.71□□□□□ -1.18
PPP4R1-227ENST00000583988 SIX5Q8N196 739 aa7.71□□□□□ -1.18
PPP4R1-227ENST00000583988 TMEM151AQ8N4L1 468 aa7.71□□□□□ -1.18
PPP4R1-227ENST00000583988 GALNT6Q8NCL4 622 aa7.71□□□□□ -1.18
PPP4R1-227ENST00000583988 VRTNQ9H8Y1 702 aa7.71□□□□□ -1.18
PPP4R1-227ENST00000583988 CNTNAP5Q8WYK1 1306 aa7.71□□□□□ -1.18
PPP4R1-227ENST00000583988 MAPTP10636 758 aaKnown RBP7.7□□□□□ -1.18
PPP4R1-227ENST00000583988 RFX1P22670 979 aa7.7□□□□□ -1.18
PPP4R1-227ENST00000583988 TNP2Q05952 138 aa7.7□□□□□ -1.18
PPP4R1-227ENST00000583988 LRRC69Q6ZNQ3 347 aa7.7□□□□□ -1.18
PPP4R1-227ENST00000583988 NEUROD4Q9HD90 331 aa7.7□□□□□ -1.18
PPP4R1-227ENST00000583988 CHMP3Q9Y3E7 222 aa7.7□□□□□ -1.18
PPP4R1-227ENST00000583988 DKK1O94907 266 aa7.69□□□□□ -1.18
PPP4R1-227ENST00000583988 PSMA6P60900 246 aaKnown RBP7.69□□□□□ -1.18
PPP4R1-227ENST00000583988 C1orf229Q6ZS94 237 aaPredicted RBP7.69□□□□□ -1.18
PPP4R1-227ENST00000583988 PODNQ7Z5L7 613 aa7.69□□□□□ -1.18
PPP4R1-227ENST00000583988 KCTD17Q8N5Z5 321 aa7.69□□□□□ -1.18
PPP4R1-227ENST00000583988 LRRC4BQ9NT99 713 aa7.69□□□□□ -1.18
PPP4R1-227ENST00000583988 GGA1Q9UJY5 639 aa7.69□□□□□ -1.18
PPP4R1-227ENST00000583988 GDF2Q9UK05 429 aaPredicted RBP7.69□□□□□ -1.18
PPP4R1-227ENST00000583988 HCN4Q9Y3Q4 1203 aa7.69□□□□□ -1.18
PPP4R1-227ENST00000583988 DNMT3AQ9Y6K1 912 aaPredicted RBP7.69□□□□□ -1.18
PPP4R1-227ENST00000583988 SHISA8B8ZZ34 492 aa7.68□□□□□ -1.18
PPP4R1-227ENST00000583988 M0R2N6 131 aa7.68□□□□□ -1.18
PPP4R1-227ENST00000583988 EML1O00423 815 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 170.3 ms