RNA–Protein interactions for RNA: ENST00000583796.1

IFT20-213, Transcript of intraflagellar transport 20, humanhuman

Gene IFT20, Length 1,485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-213ENST00000583796 ERBB4Q15303 1308 aa12.82□□□□□ -0.36
IFT20-213ENST00000583796 NRAPQ86VF7 1730 aa12.82□□□□□ -0.36
IFT20-213ENST00000583796 HMMRO75330 724 aa12.81□□□□□ -0.36
IFT20-213ENST00000583796 CABP4P57796 275 aa12.81□□□□□ -0.36
IFT20-213ENST00000583796 ANKRD44Q8N8A2 993 aa12.81□□□□□ -0.36
IFT20-213ENST00000583796 NFATC2IPQ8NCF5 419 aa12.81□□□□□ -0.36
IFT20-213ENST00000583796 FMNL2Q96PY5 1086 aa12.81□□□□□ -0.36
IFT20-213ENST00000583796 STRN4Q9NRL3 753 aa12.81□□□□□ -0.36
IFT20-213ENST00000583796 C5P01031 1676 aa12.8□□□□□ -0.36
IFT20-213ENST00000583796 KCNQ3O43525 872 aa12.8□□□□□ -0.36
IFT20-213ENST00000583796 SNRPA1P09661 255 aaKnown RBP12.8□□□□□ -0.36
IFT20-213ENST00000583796 RGS3P49796 1198 aa12.8□□□□□ -0.36
IFT20-213ENST00000583796 NUCB1Q02818 461 aa12.8□□□□□ -0.36
IFT20-213ENST00000583796 DDX21Q9NR30 783 aaKnown RBP eCLIP12.8□□□□□ -0.36
IFT20-213ENST00000583796 CHPF2Q9P2E5 772 aa12.8□□□□□ -0.36
IFT20-213ENST00000583796 HDAC5Q9UQL6 1122 aa12.8□□□□□ -0.36
IFT20-213ENST00000583796 THRAP3Q9Y2W1 955 aaKnown RBP12.8□□□□□ -0.36
IFT20-213ENST00000583796 GLI3P10071 1580 aa12.8□□□□□ -0.36
IFT20-213ENST00000583796 DDX58O95786 925 aaKnown RBP12.79□□□□□ -0.36
IFT20-213ENST00000583796 EIF2S2P20042 333 aaKnown RBP12.79□□□□□ -0.36
IFT20-213ENST00000583796 TNS2Q63HR2 1409 aa12.79□□□□□ -0.36
IFT20-213ENST00000583796 GNAI2P04899 355 aa12.78□□□□□ -0.36
IFT20-213ENST00000583796 CEP85Q6P2H3 762 aa12.78□□□□□ -0.36
IFT20-213ENST00000583796 SLC4A10Q6U841 1118 aa12.78□□□□□ -0.36
IFT20-213ENST00000583796 DNAAF4Q8WXU2 420 aa12.78□□□□□ -0.36
IFT20-213ENST00000583796 DCTPP1Q9H773 170 aa12.78□□□□□ -0.36
IFT20-213ENST00000583796 F6X3S4 739 aa12.78□□□□□ -0.36
IFT20-213ENST00000583796 ANP32AP39687 249 aaKnown RBP12.78□□□□□ -0.36
IFT20-213ENST00000583796 MKRN4PQ13434 485 aaPredicted RBP12.78□□□□□ -0.36
IFT20-213ENST00000583796 CHD1LQ86WJ1 897 aa12.78□□□□□ -0.36
IFT20-213ENST00000583796 SIRT2Q8IXJ6 389 aa12.78□□□□□ -0.36
IFT20-213ENST00000583796 MEIS3Q99687 375 aa12.78□□□□□ -0.36
IFT20-213ENST00000583796 SRCIN1Q9C0H9 1055 aa12.78□□□□□ -0.36
IFT20-213ENST00000583796 SLIT2O94813 1529 aa12.77□□□□□ -0.37
IFT20-213ENST00000583796 ALDH1L1O75891 902 aa12.77□□□□□ -0.37
IFT20-213ENST00000583796 C8orf34Q49A92 452 aa12.77□□□□□ -0.37
IFT20-213ENST00000583796 KSR2Q6VAB6 950 aa12.77□□□□□ -0.37
IFT20-213ENST00000583796 NECTIN2Q92692 538 aa12.77□□□□□ -0.37
IFT20-213ENST00000583796 ZNF496Q96IT1 587 aaPredicted RBP12.77□□□□□ -0.37
IFT20-213ENST00000583796 PHAXQ9H814 394 aaKnown RBP12.77□□□□□ -0.37
IFT20-213ENST00000583796 TOGARAM1Q9Y4F4 1720 aa12.77□□□□□ -0.37
IFT20-213ENST00000583796 KCPQ6ZWJ8 1503 aa12.76□□□□□ -0.37
IFT20-213ENST00000583796 ADCY9O60503 1353 aa12.76□□□□□ -0.37
IFT20-213ENST00000583796 JCADQ9P266 1359 aa12.76□□□□□ -0.37
IFT20-213ENST00000583796 C1orf115Q9H7X2 142 aa12.76□□□□□ -0.37
IFT20-213ENST00000583796 BEND3Q5T5X7 828 aa12.75□□□□□ -0.37
IFT20-213ENST00000583796 PI4KAP2A4QPH2 592 aa12.74□□□□□ -0.37
IFT20-213ENST00000583796 UBAP1LF5GYI3 381 aa12.74□□□□□ -0.37
IFT20-213ENST00000583796 UBTFL1P0CB47 393 aaPredicted RBP12.74□□□□□ -0.37
IFT20-213ENST00000583796 SLC39A6Q13433 755 aa12.74□□□□□ -0.37
IFT20-213ENST00000583796 PDIA6Q15084 440 aa12.74□□□□□ -0.37
IFT20-213ENST00000583796 SKAP1Q86WV1 359 aa12.74□□□□□ -0.37
IFT20-213ENST00000583796 PI4KAP1Q8N8J0 262 aa12.74□□□□□ -0.37
IFT20-213ENST00000583796 ZBTB47Q9UFB7 747 aaPredicted RBP12.74□□□□□ -0.37
IFT20-213ENST00000583796 SPATA31A1Q5TZJ5 1347 aa12.73□□□□□ -0.37
IFT20-213ENST00000583796 EIF5BO60841 1220 aaKnown RBP12.73□□□□□ -0.37
IFT20-213ENST00000583796 VSIG10Q8N0Z9 540 aa12.73□□□□□ -0.37
IFT20-213ENST00000583796 LINS1Q8NG48 757 aa12.73□□□□□ -0.37
IFT20-213ENST00000583796 TEX13AQ9BXU3 409 aaPredicted RBP12.73□□□□□ -0.37
IFT20-213ENST00000583796 USP44Q9H0E7 712 aa12.73□□□□□ -0.37
IFT20-213ENST00000583796 SPATA31A6Q5VVP1 1343 aa12.73□□□□□ -0.37
IFT20-213ENST00000583796 PITPNM1O00562 1244 aa12.72□□□□□ -0.37
IFT20-213ENST00000583796 BMP2KLQ5H9B9 411 aa12.72□□□□□ -0.37
IFT20-213ENST00000583796 ANKRD45Q5TZF3 282 aa12.72□□□□□ -0.37
IFT20-213ENST00000583796 BARGINQ6ZT62 677 aa12.72□□□□□ -0.37
IFT20-213ENST00000583796 DDX54Q8TDD1 881 aaKnown RBP12.72□□□□□ -0.37
IFT20-213ENST00000583796 TMOD3Q9NYL9 352 aa12.72□□□□□ -0.37
IFT20-213ENST00000583796 EXOC5O00471 708 aa12.72□□□□□ -0.37
IFT20-213ENST00000583796 ATP8B2P98198 1209 aa12.72□□□□□ -0.37
IFT20-213ENST00000583796 NEXNQ0ZGT2 675 aa12.72□□□□□ -0.37
IFT20-213ENST00000583796 MAP3K2Q9Y2U5 619 aa12.72□□□□□ -0.37
IFT20-213ENST00000583796 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.71□□□□□ -0.37
IFT20-213ENST00000583796 ITGB4P16144 1822 aa12.71□□□□□ -0.37
IFT20-213ENST00000583796 UTYO14607 1347 aa12.71□□□□□ -0.37
IFT20-213ENST00000583796 SPATA31A5Q5VU36 1347 aa12.71□□□□□ -0.37
IFT20-213ENST00000583796 SPATA31A7Q8IWB4 1347 aa12.71□□□□□ -0.37
IFT20-213ENST00000583796 BCL9O00512 1426 aa12.71□□□□□ -0.38
IFT20-213ENST00000583796 PIP4K2BP78356 416 aa12.71□□□□□ -0.38
IFT20-213ENST00000583796 MTX1Q13505 466 aa12.71□□□□□ -0.38
IFT20-213ENST00000583796 LRP10Q7Z4F1 713 aa12.71□□□□□ -0.38
IFT20-213ENST00000583796 LNPKQ9C0E8 428 aa12.71□□□□□ -0.38
IFT20-213ENST00000583796 USP35Q9P2H5 1018 aa12.71□□□□□ -0.38
IFT20-213ENST00000583796 PRAMEF22A3QJZ6 481 aa12.7□□□□□ -0.38
IFT20-213ENST00000583796 PROSER3Q2NL68 480 aa12.7□□□□□ -0.38
IFT20-213ENST00000583796 UPF2Q9HAU5 1272 aaKnown RBP12.7□□□□□ -0.38
IFT20-213ENST00000583796 COL15A1P39059 1388 aa12.7□□□□□ -0.38
IFT20-213ENST00000583796 CICQ96RK0 1608 aaPredicted RBP12.7□□□□□ -0.38
IFT20-213ENST00000583796 ARFGEF2Q9Y6D5 1785 aa12.69□□□□□ -0.38
IFT20-213ENST00000583796 ADAMTS2O95450 1211 aa12.69□□□□□ -0.38
IFT20-213ENST00000583796 HSP90AB4PQ58FF6 505 aa12.69□□□□□ -0.38
IFT20-213ENST00000583796 SSH3Q8TE77 659 aa12.69□□□□□ -0.38
IFT20-213ENST00000583796 METTL22Q9BUU2 404 aaPredicted RBP12.69□□□□□ -0.38
IFT20-213ENST00000583796 LRRFIP2Q9Y608 721 aaKnown RBP12.69□□□□□ -0.38
IFT20-213ENST00000583796 RAB11FIP3O75154 756 aa12.68□□□□□ -0.38
IFT20-213ENST00000583796 ANXA1P04083 346 aa12.68□□□□□ -0.38
IFT20-213ENST00000583796 ANKRD13DQ6ZTN6 518 aa12.68□□□□□ -0.38
IFT20-213ENST00000583796 RIC3Q7Z5B4 369 aa12.68□□□□□ -0.38
IFT20-213ENST00000583796 PLBD2Q8NHP8 589 aa12.68□□□□□ -0.38
IFT20-213ENST00000583796 DDRGK1Q96HY6 314 aa12.68□□□□□ -0.38
IFT20-213ENST00000583796 USP16Q9Y5T5 823 aa12.68□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms