RNA–Protein interactions for RNA: ENST00000583391.1

ERBB2-215, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 3

Gene ERBB2, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-215ENST00000583391 CNTNAP4Q9C0A0 1308 aa16.9■□□□□ 0.3
ERBB2-215ENST00000583391 BCORQ6W2J9 1755 aa16.89■□□□□ 0.3
ERBB2-215ENST00000583391 CRKLP46109 303 aaKnown RBP16.89■□□□□ 0.29
ERBB2-215ENST00000583391 STK32BQ9NY57 414 aa16.89■□□□□ 0.29
ERBB2-215ENST00000583391 SCN7AQ01118 1682 aa16.88■□□□□ 0.29
ERBB2-215ENST00000583391 STARD3NLO95772 234 aa16.88■□□□□ 0.29
ERBB2-215ENST00000583391 CYP19A1P11511 503 aaPredicted RBP16.88■□□□□ 0.29
ERBB2-215ENST00000583391 SLFN5Q08AF3 891 aa16.88■□□□□ 0.29
ERBB2-215ENST00000583391 TEX13AQ9BXU3 409 aaPredicted RBP16.88■□□□□ 0.29
ERBB2-215ENST00000583391 ELL2O00472 640 aaPredicted RBP16.87■□□□□ 0.29
ERBB2-215ENST00000583391 GNPATO15228 680 aa16.87■□□□□ 0.29
ERBB2-215ENST00000583391 NBPF14Q5TI25 921 aa16.87■□□□□ 0.29
ERBB2-215ENST00000583391 DUSP27Q5VZP5 1158 aa16.87■□□□□ 0.29
ERBB2-215ENST00000583391 C8orf58Q8NAV2 365 aa16.87■□□□□ 0.29
ERBB2-215ENST00000583391 AKT1S1Q96B36 256 aa16.87■□□□□ 0.29
ERBB2-215ENST00000583391 CCDC87Q9NVE4 849 aa16.87■□□□□ 0.29
ERBB2-215ENST00000583391 ZBTB1Q9Y2K1 713 aa16.87■□□□□ 0.29
ERBB2-215ENST00000583391 USP16Q9Y5T5 823 aa16.87■□□□□ 0.29
ERBB2-215ENST00000583391 EIF2S2P20042 333 aaKnown RBP16.86■□□□□ 0.29
ERBB2-215ENST00000583391 HMGB2P26583 209 aaKnown RBP16.86■□□□□ 0.29
ERBB2-215ENST00000583391 EXOSC9Q06265 439 aaKnown RBP16.86■□□□□ 0.29
ERBB2-215ENST00000583391 SLC15A2Q16348 729 aa16.86■□□□□ 0.29
ERBB2-215ENST00000583391 TSPYL6Q8N831 410 aa16.86■□□□□ 0.29
ERBB2-215ENST00000583391 NECTIN2Q92692 538 aa16.86■□□□□ 0.29
ERBB2-215ENST00000583391 TFCP2L1Q9NZI6 479 aa16.86■□□□□ 0.29
ERBB2-215ENST00000583391 PHF14O94880 888 aa16.85■□□□□ 0.29
ERBB2-215ENST00000583391 HOXB7P09629 217 aa16.85■□□□□ 0.29
ERBB2-215ENST00000583391 PIP4K2AP48426 406 aaPredicted RBP16.85■□□□□ 0.29
ERBB2-215ENST00000583391 INTS5Q6P9B9 1019 aaKnown RBP16.85■□□□□ 0.29
ERBB2-215ENST00000583391 NUP98P52948 1817 aa16.84■□□□□ 0.29
ERBB2-215ENST00000583391 PSDA5PKW4 1024 aaPredicted RBP16.84■□□□□ 0.29
ERBB2-215ENST00000583391 A1BGP04217 495 aa16.84■□□□□ 0.29
ERBB2-215ENST00000583391 CANXP27824 592 aaKnown RBP16.84■□□□□ 0.29
ERBB2-215ENST00000583391 R3HDM1Q15032 1099 aaKnown RBP16.84■□□□□ 0.29
ERBB2-215ENST00000583391 TWISTNBQ3B726 338 aaPredicted RBP16.84■□□□□ 0.29
ERBB2-215ENST00000583391 RC3H1Q5TC82 1133 aaKnown RBP16.84■□□□□ 0.29
ERBB2-215ENST00000583391 HDGFL1Q5TGJ6 251 aa16.84■□□□□ 0.29
ERBB2-215ENST00000583391 SMIM5Q71RC9 77 aa16.84■□□□□ 0.29
ERBB2-215ENST00000583391 AMIGO3Q86WK7 504 aa16.84■□□□□ 0.29
ERBB2-215ENST00000583391 COL15A1P39059 1388 aa16.84■□□□□ 0.29
ERBB2-215ENST00000583391 SOS1Q07889 1333 aaPredicted RBP16.83■□□□□ 0.28
ERBB2-215ENST00000583391 ANKRD36CQ5JPF3 1778 aa16.83■□□□□ 0.28
ERBB2-215ENST00000583391 RTCBQ9Y3I0 505 aaKnown RBP16.83■□□□□ 0.28
ERBB2-215ENST00000583391 ZNF330Q9Y3S2 320 aaPredicted RBP16.83■□□□□ 0.28
ERBB2-215ENST00000583391 ARFGEF2Q9Y6D5 1785 aa16.83■□□□□ 0.28
ERBB2-215ENST00000583391 PNPLA7Q6ZV29 1317 aa16.82■□□□□ 0.28
ERBB2-215ENST00000583391 TRMT2AQ8IZ69 625 aaKnown RBP16.82■□□□□ 0.28
ERBB2-215ENST00000583391 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.81■□□□□ 0.28
ERBB2-215ENST00000583391 RPS6KA4O75676 772 aa16.81■□□□□ 0.28
ERBB2-215ENST00000583391 ERBB4Q15303 1308 aa16.8■□□□□ 0.28
ERBB2-215ENST00000583391 COL24A1Q17RW2 1714 aa16.8■□□□□ 0.28
ERBB2-215ENST00000583391 NBPF26B4DH59 902 aa16.8■□□□□ 0.28
ERBB2-215ENST00000583391 ANXA1P04083 346 aa16.8■□□□□ 0.28
ERBB2-215ENST00000583391 MYL6BP14649 208 aa16.8■□□□□ 0.28
ERBB2-215ENST00000583391 SSFA2P28290 1259 aa16.8■□□□□ 0.28
ERBB2-215ENST00000583391 PROSER3Q2NL68 480 aa16.8■□□□□ 0.28
ERBB2-215ENST00000583391 NBPF10Q6P3W6 841 aaKnown RBP16.8■□□□□ 0.28
ERBB2-215ENST00000583391 NBPF15Q8N660 670 aa16.8■□□□□ 0.28
ERBB2-215ENST00000583391 CHPF2Q9P2E5 772 aa16.8■□□□□ 0.28
ERBB2-215ENST00000583391 TCERG1O14776 1098 aaKnown RBP16.79■□□□□ 0.28
ERBB2-215ENST00000583391 MSH5O43196 834 aa16.79■□□□□ 0.28
ERBB2-215ENST00000583391 IL6STP40189 918 aaPredicted RBP16.79■□□□□ 0.28
ERBB2-215ENST00000583391 AFDNP55196 1824 aaKnown RBP16.78■□□□□ 0.28
ERBB2-215ENST00000583391 VAMP4O75379 141 aa16.78■□□□□ 0.28
ERBB2-215ENST00000583391 ADRA2BP18089 450 aa16.78■□□□□ 0.28
ERBB2-215ENST00000583391 EIF5P55010 431 aaKnown RBP16.78■□□□□ 0.28
ERBB2-215ENST00000583391 CCDC30Q5VVM6 783 aa16.78■□□□□ 0.28
ERBB2-215ENST00000583391 COL23A1Q86Y22 540 aaPredicted RBP16.78■□□□□ 0.28
ERBB2-215ENST00000583391 PDGFDQ9GZP0 370 aaPredicted RBP16.78■□□□□ 0.28
ERBB2-215ENST00000583391 PDIA6Q15084 440 aa16.77■□□□□ 0.28
ERBB2-215ENST00000583391 TRAPPC3LQ5T215 181 aa16.77■□□□□ 0.28
ERBB2-215ENST00000583391 NPM2Q86SE8 214 aaKnown RBP16.77■□□□□ 0.28
ERBB2-215ENST00000583391 FLAD1Q8NFF5 587 aa16.77■□□□□ 0.28
ERBB2-215ENST00000583391 DDX21Q9NR30 783 aaKnown RBP eCLIP16.77■□□□□ 0.28
ERBB2-215ENST00000583391 DBF4Q9UBU7 674 aaPredicted RBP16.77■□□□□ 0.28
ERBB2-215ENST00000583391 ARHGEF1Q92888 912 aaKnown RBP16.76■□□□□ 0.27
ERBB2-215ENST00000583391 ARXQ96QS3 562 aa16.76■□□□□ 0.27
ERBB2-215ENST00000583391 STK31Q9BXU1 1019 aa16.76■□□□□ 0.27
ERBB2-215ENST00000583391 RFC4P35249 363 aa16.75■□□□□ 0.27
ERBB2-215ENST00000583391 CHMP4AQ9BY43 222 aa16.75■□□□□ 0.27
ERBB2-215ENST00000583391 SRP68Q9UHB9 627 aaKnown RBP16.75■□□□□ 0.27
ERBB2-215ENST00000583391 USP42Q9H9J4 1324 aaKnown RBP16.74■□□□□ 0.27
ERBB2-215ENST00000583391 A0A087WZG4 1122 aa16.74■□□□□ 0.27
ERBB2-215ENST00000583391 LRP10Q7Z4F1 713 aa16.74■□□□□ 0.27
ERBB2-215ENST00000583391 DZIP3Q86Y13 1208 aaKnown RBP16.74■□□□□ 0.27
ERBB2-215ENST00000583391 TBC1D2BQ9UPU7 963 aa16.74■□□□□ 0.27
ERBB2-215ENST00000583391 N4BP2Q86UW6 1770 aaPredicted RBP16.74■□□□□ 0.27
ERBB2-215ENST00000583391 AIMP1Q12904 312 aaKnown RBP16.73■□□□□ 0.27
ERBB2-215ENST00000583391 XAGE3Q8WTP9 111 aa16.73■□□□□ 0.27
ERBB2-215ENST00000583391 HYPKQ9NX55 129 aa16.73■□□□□ 0.27
ERBB2-215ENST00000583391 ZPR1O75312 459 aa16.72■□□□□ 0.27
ERBB2-215ENST00000583391 ZBTB7AO95365 584 aa16.72■□□□□ 0.27
ERBB2-215ENST00000583391 CT47B1P0C2W7 299 aaPredicted RBP16.72■□□□□ 0.27
ERBB2-215ENST00000583391 USPL1Q5W0Q7 1092 aa16.72■□□□□ 0.27
ERBB2-215ENST00000583391 MSL1Q68DK7 614 aa16.72■□□□□ 0.27
ERBB2-215ENST00000583391 KIF6Q6ZMV9 814 aa16.72■□□□□ 0.27
ERBB2-215ENST00000583391 TTLL7Q6ZT98 887 aa16.72■□□□□ 0.27
ERBB2-215ENST00000583391 BCL2L13Q9BXK5 485 aa16.72■□□□□ 0.27
ERBB2-215ENST00000583391 PHAXQ9H814 394 aaKnown RBP16.72■□□□□ 0.27
ERBB2-215ENST00000583391 NARFQ9UHQ1 456 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms