RNA–Protein interactions for RNA: ENST00000583294.1

SMARCE1-219, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-219ENST00000583294 HRH3Q9Y5N1 445 aa10.15□□□□□ -0.78
SMARCE1-219ENST00000583294 USP3Q9Y6I4 520 aa10.15□□□□□ -0.78
SMARCE1-219ENST00000583294 ATAD2Q6PL18 1390 aa10.14□□□□□ -0.79
SMARCE1-219ENST00000583294 SLC35F4A4IF30 521 aa10.14□□□□□ -0.79
SMARCE1-219ENST00000583294 KCNA1Q09470 495 aa10.14□□□□□ -0.79
SMARCE1-219ENST00000583294 SLC9A9Q8IVB4 645 aa10.14□□□□□ -0.79
SMARCE1-219ENST00000583294 RNF217Q8TC41 542 aa10.14□□□□□ -0.79
SMARCE1-219ENST00000583294 MKNK1Q9BUB5 465 aa10.14□□□□□ -0.79
SMARCE1-219ENST00000583294 SCHIP1Q9P0W5 487 aaPredicted RBP10.14□□□□□ -0.79
SMARCE1-219ENST00000583294 MTFR1Q15390 333 aa10.13□□□□□ -0.79
SMARCE1-219ENST00000583294 C21orf2O43822 256 aa10.12□□□□□ -0.79
SMARCE1-219ENST00000583294 PPP1R12BO60237 982 aaPredicted RBP10.12□□□□□ -0.79
SMARCE1-219ENST00000583294 FOXK2Q01167 660 aa10.12□□□□□ -0.79
SMARCE1-219ENST00000583294 FKBP5Q13451 457 aaPredicted RBP10.12□□□□□ -0.79
SMARCE1-219ENST00000583294 FOXD4L5Q5VV16 416 aaPredicted RBP10.12□□□□□ -0.79
SMARCE1-219ENST00000583294 ZSCAN10Q96SZ4 725 aaPredicted RBP10.12□□□□□ -0.79
SMARCE1-219ENST00000583294 FHDC1Q9C0D6 1143 aaPredicted RBP10.12□□□□□ -0.79
SMARCE1-219ENST00000583294 FAM181BA6NEQ2 426 aa10.11□□□□□ -0.79
SMARCE1-219ENST00000583294 IGFBP4P22692 258 aa10.11□□□□□ -0.79
SMARCE1-219ENST00000583294 SLC27A3Q5K4L6 730 aa10.11□□□□□ -0.79
SMARCE1-219ENST00000583294 IVNS1ABPQ9Y6Y0 642 aa10.11□□□□□ -0.79
SMARCE1-219ENST00000583294 CDK2AP1O14519 115 aa10.1□□□□□ -0.79
SMARCE1-219ENST00000583294 KRT76Q01546 638 aa10.1□□□□□ -0.79
SMARCE1-219ENST00000583294 TMEM214Q6NUQ4 689 aaKnown RBP10.1□□□□□ -0.79
SMARCE1-219ENST00000583294 CAPN12Q6ZSI9 719 aa10.1□□□□□ -0.79
SMARCE1-219ENST00000583294 IQSEC3Q9UPP2 1182 aaPredicted RBP10.1□□□□□ -0.79
SMARCE1-219ENST00000583294 SENP3-EIF4A1A0A087X0R7 540 aa10.09□□□□□ -0.79
SMARCE1-219ENST00000583294 GTF2E1P29083 439 aaPredicted RBP10.09□□□□□ -0.79
SMARCE1-219ENST00000583294 ARID4AP29374 1257 aaPredicted RBP10.09□□□□□ -0.79
SMARCE1-219ENST00000583294 TAS1R3Q7RTX0 852 aa10.09□□□□□ -0.79
SMARCE1-219ENST00000583294 VWA5B2Q8N398 1253 aa10.09□□□□□ -0.79
SMARCE1-219ENST00000583294 GZF1Q9H116 711 aaPredicted RBP10.09□□□□□ -0.79
SMARCE1-219ENST00000583294 CABP1Q9NZU7 370 aa10.09□□□□□ -0.79
SMARCE1-219ENST00000583294 PATL2C9JE40 543 aaKnown RBP10.08□□□□□ -0.8
SMARCE1-219ENST00000583294 ITGA6P23229 1130 aa10.08□□□□□ -0.8
SMARCE1-219ENST00000583294 RNF144AP50876 292 aaPredicted RBP10.08□□□□□ -0.8
SMARCE1-219ENST00000583294 PRICKLE2Q7Z3G6 844 aa10.08□□□□□ -0.8
SMARCE1-219ENST00000583294 C1orf216Q8TAB5 229 aa10.08□□□□□ -0.8
SMARCE1-219ENST00000583294 NANOS1Q8WY41 292 aaKnown RBP10.08□□□□□ -0.8
SMARCE1-219ENST00000583294 VTI1AQ96AJ9 217 aa10.08□□□□□ -0.8
SMARCE1-219ENST00000583294 CNTNAP3BQ96NU0 1288 aa10.08□□□□□ -0.8
SMARCE1-219ENST00000583294 CNTNAP3Q9BZ76 1288 aa10.08□□□□□ -0.8
SMARCE1-219ENST00000583294 GRIP2Q9C0E4 1043 aa10.08□□□□□ -0.8
SMARCE1-219ENST00000583294 PARP3Q9Y6F1 533 aa10.08□□□□□ -0.8
SMARCE1-219ENST00000583294 PSMA6P60900 246 aaKnown RBP10.07□□□□□ -0.8
SMARCE1-219ENST00000583294 NAA30Q147X3 362 aaPredicted RBP10.07□□□□□ -0.8
SMARCE1-219ENST00000583294 LYSMD3Q7Z3D4 306 aa10.07□□□□□ -0.8
SMARCE1-219ENST00000583294 TXNDC2Q86VQ3 553 aa10.07□□□□□ -0.8
SMARCE1-219ENST00000583294 PPARGC1BQ86YN6 1023 aaKnown RBP10.07□□□□□ -0.8
SMARCE1-219ENST00000583294 CCER1Q8TC90 406 aaPredicted RBP10.07□□□□□ -0.8
SMARCE1-219ENST00000583294 COL25A1Q9BXS0 654 aaPredicted RBP10.07□□□□□ -0.8
SMARCE1-219ENST00000583294 PODXL2Q9NZ53 605 aa10.07□□□□□ -0.8
SMARCE1-219ENST00000583294 SEPT3Q9UH03 358 aa10.07□□□□□ -0.8
SMARCE1-219ENST00000583294 ZNF232Q9UNY5 417 aa10.07□□□□□ -0.8
SMARCE1-219ENST00000583294 CDC14CA4D256 554 aa10.06□□□□□ -0.8
SMARCE1-219ENST00000583294 FOXO3O43524 673 aa10.06□□□□□ -0.8
SMARCE1-219ENST00000583294 GPC1P35052 558 aa10.06□□□□□ -0.8
SMARCE1-219ENST00000583294 SERPINB4P48594 390 aa10.06□□□□□ -0.8
SMARCE1-219ENST00000583294 SH3PXD2AQ5TCZ1 1133 aa10.06□□□□□ -0.8
SMARCE1-219ENST00000583294 NBPF15Q8N660 670 aa10.06□□□□□ -0.8
SMARCE1-219ENST00000583294 ZDHHC1Q8WTX9 485 aa10.06□□□□□ -0.8
SMARCE1-219ENST00000583294 CHMP3Q9Y3E7 222 aa10.06□□□□□ -0.8
SMARCE1-219ENST00000583294 SERTM1A2A2V5 107 aa10.05□□□□□ -0.8
SMARCE1-219ENST00000583294 RHOQP17081 205 aa10.05□□□□□ -0.8
SMARCE1-219ENST00000583294 PHKA2P46019 1235 aa10.05□□□□□ -0.8
SMARCE1-219ENST00000583294 GNASQ5JWF2 1037 aa10.05□□□□□ -0.8
SMARCE1-219ENST00000583294 RHBDD1Q8TEB9 315 aa10.05□□□□□ -0.8
SMARCE1-219ENST00000583294 C2orf49Q9BVC5 232 aaPredicted RBP10.05□□□□□ -0.8
SMARCE1-219ENST00000583294 NIFKQ9BYG3 293 aaKnown RBP10.05□□□□□ -0.8
SMARCE1-219ENST00000583294 ABL1P00519 1130 aa10.04□□□□□ -0.8
SMARCE1-219ENST00000583294 NOS2P35228 1153 aa10.04□□□□□ -0.8
SMARCE1-219ENST00000583294 POU4F2Q12837 409 aa10.04□□□□□ -0.8
SMARCE1-219ENST00000583294 TEAD4Q15561 434 aa10.04□□□□□ -0.8
SMARCE1-219ENST00000583294 RNFT1Q5M7Z0 435 aa10.04□□□□□ -0.8
SMARCE1-219ENST00000583294 NGLY1Q96IV0 654 aa10.04□□□□□ -0.8
SMARCE1-219ENST00000583294 MTMR7Q9Y216 660 aa10.04□□□□□ -0.8
SMARCE1-219ENST00000583294 GNEQ9Y223 722 aaKnown RBP10.04□□□□□ -0.8
SMARCE1-219ENST00000583294 HCN4Q9Y3Q4 1203 aa10.04□□□□□ -0.8
SMARCE1-219ENST00000583294 PLA2G4AP47712 749 aa10.03□□□□□ -0.8
SMARCE1-219ENST00000583294 C4orf17Q53FE4 359 aa10.03□□□□□ -0.8
SMARCE1-219ENST00000583294 SV2AQ7L0J3 742 aa10.03□□□□□ -0.8
SMARCE1-219ENST00000583294 ZNF295-AS1Q8N0V1 137 aa10.03□□□□□ -0.8
SMARCE1-219ENST00000583294 L3MBTL2Q969R5 705 aa10.03□□□□□ -0.8
SMARCE1-219ENST00000583294 ANO2Q9NQ90 1003 aa10.03□□□□□ -0.8
SMARCE1-219ENST00000583294 CUEDC1Q9NWM3 386 aaPredicted RBP10.03□□□□□ -0.8
SMARCE1-219ENST00000583294 EML1O00423 815 aa10.02□□□□□ -0.81
SMARCE1-219ENST00000583294 PTCD1O75127 700 aaKnown RBP10.02□□□□□ -0.81
SMARCE1-219ENST00000583294 GTF3C2Q8WUA4 911 aaPredicted RBP10.02□□□□□ -0.81
SMARCE1-219ENST00000583294 ZNF211Q13398 564 aaPredicted RBP10.01□□□□□ -0.81
SMARCE1-219ENST00000583294 STAG2Q8N3U4 1231 aa10.01□□□□□ -0.81
SMARCE1-219ENST00000583294 AIDAQ96BJ3 306 aa10.01□□□□□ -0.81
SMARCE1-219ENST00000583294 NBPF10Q6P3W6 841 aaKnown RBP10□□□□□ -0.81
SMARCE1-219ENST00000583294 SAP130Q9H0E3 1048 aa10□□□□□ -0.81
SMARCE1-219ENST00000583294 UTP3Q9NQZ2 479 aaKnown RBP eCLIP10□□□□□ -0.81
SMARCE1-219ENST00000583294 SPATA31C2B4DYI2 1134 aa9.99□□□□□ -0.81
SMARCE1-219ENST00000583294 TXLNAP40222 546 aa9.99□□□□□ -0.81
SMARCE1-219ENST00000583294 MTMR3Q13615 1198 aa9.99□□□□□ -0.81
SMARCE1-219ENST00000583294 COL26A1Q96A83 441 aa9.99□□□□□ -0.81
SMARCE1-219ENST00000583294 DNMT3AQ9Y6K1 912 aaPredicted RBP9.99□□□□□ -0.81
SMARCE1-219ENST00000583294 ALDH16A1Q8IZ83 802 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms