RNA–Protein interactions for RNA: ENST00000582885.1

CCDC57-216, Transcript of coiled-coil domain containing 57, humanhuman

TSL 3

Gene CCDC57, Length 537 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-216ENST00000582885 SLC4A2P04920 1241 aa15.36■□□□□ 0.05
CCDC57-216ENST00000582885 EIF2S2P20042 333 aaKnown RBP15.36■□□□□ 0.05
CCDC57-216ENST00000582885 SLC4A9Q96Q91 983 aa15.36■□□□□ 0.05
CCDC57-216ENST00000582885 RBM42Q9BTD8 480 aaKnown RBP15.36■□□□□ 0.05
CCDC57-216ENST00000582885 BCL2L13Q9BXK5 485 aa15.36■□□□□ 0.05
CCDC57-216ENST00000582885 EP400Q96L91 3159 aa15.35■□□□□ 0.05
CCDC57-216ENST00000582885 LOC102724428A0A0B4J2F2 783 aa15.35■□□□□ 0.05
CCDC57-216ENST00000582885 SIK1P57059 783 aa15.35■□□□□ 0.05
CCDC57-216ENST00000582885 PDE3AQ14432 1141 aa15.35■□□□□ 0.05
CCDC57-216ENST00000582885 ZKSCAN2Q63HK3 967 aa15.35■□□□□ 0.05
CCDC57-216ENST00000582885 DDX21Q9NR30 783 aaKnown RBP eCLIP15.35■□□□□ 0.05
CCDC57-216ENST00000582885 HYPKQ9NX55 129 aa15.35■□□□□ 0.05
CCDC57-216ENST00000582885 PTPRCP08575 1304 aa15.35■□□□□ 0.05
CCDC57-216ENST00000582885 TRIM37O94972 964 aa15.34■□□□□ 0.05
CCDC57-216ENST00000582885 STARD3NLO95772 234 aa15.34■□□□□ 0.05
CCDC57-216ENST00000582885 MS4A1P11836 297 aa15.34■□□□□ 0.05
CCDC57-216ENST00000582885 DNAJC10Q8IXB1 793 aa15.34■□□□□ 0.05
CCDC57-216ENST00000582885 CHPF2Q9P2E5 772 aa15.34■□□□□ 0.05
CCDC57-216ENST00000582885 NOB1Q9ULX3 412 aaKnown RBP15.34■□□□□ 0.05
CCDC57-216ENST00000582885 TCERG1O14776 1098 aaKnown RBP15.33■□□□□ 0.04
CCDC57-216ENST00000582885 HMGB2P26583 209 aaKnown RBP15.33■□□□□ 0.04
CCDC57-216ENST00000582885 ATP6V1AP38606 617 aa15.33■□□□□ 0.04
CCDC57-216ENST00000582885 PDIA6Q15084 440 aa15.33■□□□□ 0.04
CCDC57-216ENST00000582885 ATF7IPQ6VMQ6 1270 aa15.33■□□□□ 0.04
CCDC57-216ENST00000582885 NECTIN2Q92692 538 aa15.33■□□□□ 0.04
CCDC57-216ENST00000582885 ARFGEF2Q9Y6D5 1785 aa15.33■□□□□ 0.04
CCDC57-216ENST00000582885 NUP188Q5SRE5 1749 aa15.32■□□□□ 0.04
CCDC57-216ENST00000582885 CYP19A1P11511 503 aaPredicted RBP15.32■□□□□ 0.04
CCDC57-216ENST00000582885 CANXP27824 592 aaKnown RBP15.32■□□□□ 0.04
CCDC57-216ENST00000582885 FRAT1Q92837 279 aaPredicted RBP15.32■□□□□ 0.04
CCDC57-216ENST00000582885 API5Q9BZZ5 524 aaKnown RBP15.32■□□□□ 0.04
CCDC57-216ENST00000582885 C4BP0C0L5 1744 aa15.31■□□□□ 0.04
CCDC57-216ENST00000582885 PLSCR1O15162 318 aa15.31■□□□□ 0.04
CCDC57-216ENST00000582885 PLIN1O60240 522 aa15.31■□□□□ 0.04
CCDC57-216ENST00000582885 NEFLP07196 543 aa15.31■□□□□ 0.04
CCDC57-216ENST00000582885 LRP10Q7Z4F1 713 aa15.31■□□□□ 0.04
CCDC57-216ENST00000582885 NUP98P52948 1817 aa15.31■□□□□ 0.04
CCDC57-216ENST00000582885 NBPF26B4DH59 902 aa15.3■□□□□ 0.04
CCDC57-216ENST00000582885 TRIM27P14373 513 aa15.3■□□□□ 0.04
CCDC57-216ENST00000582885 FLIIQ13045 1269 aa15.3■□□□□ 0.04
CCDC57-216ENST00000582885 ITPK1Q13572 414 aa15.3■□□□□ 0.04
CCDC57-216ENST00000582885 SLC27A3Q5K4L6 730 aa15.3■□□□□ 0.04
CCDC57-216ENST00000582885 NBPF14Q5TI25 921 aa15.3■□□□□ 0.04
CCDC57-216ENST00000582885 NBPF10Q6P3W6 841 aaKnown RBP15.3■□□□□ 0.04
CCDC57-216ENST00000582885 G2E3Q7L622 706 aa15.3■□□□□ 0.04
CCDC57-216ENST00000582885 NBPF15Q8N660 670 aa15.3■□□□□ 0.04
CCDC57-216ENST00000582885 UBR3Q6ZT12 1888 aa15.29■□□□□ 0.04
CCDC57-216ENST00000582885 AFDNP55196 1824 aaKnown RBP15.29■□□□□ 0.04
CCDC57-216ENST00000582885 ANKRD36CQ5JPF3 1778 aa15.29■□□□□ 0.04
CCDC57-216ENST00000582885 PXDNLA1KZ92 1463 aa15.29■□□□□ 0.04
CCDC57-216ENST00000582885 PROSER3Q2NL68 480 aa15.29■□□□□ 0.04
CCDC57-216ENST00000582885 DZIP1LQ8IYY4 767 aaKnown RBP15.29■□□□□ 0.04
CCDC57-216ENST00000582885 ABCC4O15439 1325 aa15.28■□□□□ 0.04
CCDC57-216ENST00000582885 CNTNAP4Q9C0A0 1308 aa15.28■□□□□ 0.04
CCDC57-216ENST00000582885 A1BGP04217 495 aa15.28■□□□□ 0.04
CCDC57-216ENST00000582885 RC3H1Q5TC82 1133 aaKnown RBP15.28■□□□□ 0.04
CCDC57-216ENST00000582885 ERICH6BQ5W0A0 696 aa15.28■□□□□ 0.04
CCDC57-216ENST00000582885 PHAXQ9H814 394 aaKnown RBP15.28■□□□□ 0.04
CCDC57-216ENST00000582885 CCDC87Q9NVE4 849 aa15.28■□□□□ 0.04
CCDC57-216ENST00000582885 CCNL1Q9UK58 526 aaPredicted RBP15.28■□□□□ 0.04
CCDC57-216ENST00000582885 BCORQ6W2J9 1755 aa15.27■□□□□ 0.04
CCDC57-216ENST00000582885 DDX58O95786 925 aaKnown RBP15.27■□□□□ 0.04
CCDC57-216ENST00000582885 ANXA1P04083 346 aa15.27■□□□□ 0.04
CCDC57-216ENST00000582885 MYL6BP14649 208 aa15.27■□□□□ 0.04
CCDC57-216ENST00000582885 IL6STP40189 918 aaPredicted RBP15.27■□□□□ 0.04
CCDC57-216ENST00000582885 FKBP5Q13451 457 aaPredicted RBP15.27■□□□□ 0.04
CCDC57-216ENST00000582885 INTS5Q6P9B9 1019 aaKnown RBP15.27■□□□□ 0.04
CCDC57-216ENST00000582885 APBA3O96018 575 aa15.26■□□□□ 0.03
CCDC57-216ENST00000582885 CRKLP46109 303 aaKnown RBP15.26■□□□□ 0.03
CCDC57-216ENST00000582885 C20orf194Q5TEA3 1177 aa15.26■□□□□ 0.03
CCDC57-216ENST00000582885 FTSJ3Q8IY81 847 aaKnown RBP15.26■□□□□ 0.03
CCDC57-216ENST00000582885 RLBP1P12271 317 aa15.25■□□□□ 0.03
CCDC57-216ENST00000582885 INTS3Q68E01 1043 aaKnown RBP15.25■□□□□ 0.03
CCDC57-216ENST00000582885 KSR2Q6VAB6 950 aa15.25■□□□□ 0.03
CCDC57-216ENST00000582885 COPS6Q7L5N1 327 aa15.25■□□□□ 0.03
CCDC57-216ENST00000582885 CCDC125Q86Z20 511 aa15.25■□□□□ 0.03
CCDC57-216ENST00000582885 LINC00116Q8NCU8 138 aa15.25■□□□□ 0.03
CCDC57-216ENST00000582885 XAGE3Q8WTP9 111 aa15.25■□□□□ 0.03
CCDC57-216ENST00000582885 C4AP0C0L4 1744 aa15.25■□□□□ 0.03
CCDC57-216ENST00000582885 QSER1Q2KHR3 1735 aa15.25■□□□□ 0.03
CCDC57-216ENST00000582885 ADCY9O60503 1353 aa15.24■□□□□ 0.03
CCDC57-216ENST00000582885 IBTKQ9P2D0 1353 aaPredicted RBP15.24■□□□□ 0.03
CCDC57-216ENST00000582885 EIF5P55010 431 aaKnown RBP15.24■□□□□ 0.03
CCDC57-216ENST00000582885 TXNRD1Q16881 649 aa15.24■□□□□ 0.03
CCDC57-216ENST00000582885 ANKRD13DQ6ZTN6 518 aa15.24■□□□□ 0.03
CCDC57-216ENST00000582885 PANK1Q8TE04 598 aa15.24■□□□□ 0.03
CCDC57-216ENST00000582885 CLUAP1Q96AJ1 413 aa15.24■□□□□ 0.03
CCDC57-216ENST00000582885 TNNQ9UQP3 1299 aa15.24■□□□□ 0.03
CCDC57-216ENST00000582885 ZBTB1Q9Y2K1 713 aa15.24■□□□□ 0.03
CCDC57-216ENST00000582885 ATP10DQ9P241 1426 aa15.24■□□□□ 0.03
CCDC57-216ENST00000582885 TUBGCP6Q96RT7 1819 aa15.24■□□□□ 0.03
CCDC57-216ENST00000582885 PI4KAP2A4QPH2 592 aa15.23■□□□□ 0.03
CCDC57-216ENST00000582885 PIP4K2AP48426 406 aaPredicted RBP15.23■□□□□ 0.03
CCDC57-216ENST00000582885 CCT4P50991 539 aaKnown RBP15.23■□□□□ 0.03
CCDC57-216ENST00000582885 AAMPQ13685 434 aa15.23■□□□□ 0.03
CCDC57-216ENST00000582885 MVPQ14764 893 aaKnown RBP15.23■□□□□ 0.03
CCDC57-216ENST00000582885 PROM2Q8N271 834 aa15.23■□□□□ 0.03
CCDC57-216ENST00000582885 PI4KAP1Q8N8J0 262 aa15.23■□□□□ 0.03
CCDC57-216ENST00000582885 PLBD2Q8NHP8 589 aa15.23■□□□□ 0.03
CCDC57-216ENST00000582885 LRRC4BQ9NT99 713 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms