RNA–Protein interactions for RNA: ENST00000582240.5

PPP4R1-221, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-221ENST00000582240 SGIP1Q9BQI5 828 aa27.15■■□□□ 1.94
PPP4R1-221ENST00000582240 USP16Q9Y5T5 823 aa27.15■■□□□ 1.94
PPP4R1-221ENST00000582240 MYH14Q7Z406 1995 aaKnown RBP27.15■■□□□ 1.94
PPP4R1-221ENST00000582240 TSPYL4Q9UJ04 414 aa27.14■■□□□ 1.94
PPP4R1-221ENST00000582240 A1BGP04217 495 aa27.13■■□□□ 1.93
PPP4R1-221ENST00000582240 DIEXFQ68CQ4 756 aaKnown RBP27.13■■□□□ 1.93
PPP4R1-221ENST00000582240 STARD3NLO95772 234 aa27.12■■□□□ 1.93
PPP4R1-221ENST00000582240 PIP4K2AP48426 406 aaPredicted RBP27.12■■□□□ 1.93
PPP4R1-221ENST00000582240 EIF4A1P60842 406 aaKnown RBP27.12■■□□□ 1.93
PPP4R1-221ENST00000582240 SNRPA1P09661 255 aaKnown RBP27.11■■□□□ 1.93
PPP4R1-221ENST00000582240 TEX13AQ9BXU3 409 aaPredicted RBP27.11■■□□□ 1.93
PPP4R1-221ENST00000582240 SRP68Q9UHB9 627 aaKnown RBP27.11■■□□□ 1.93
PPP4R1-221ENST00000582240 SALL2Q9Y467 1007 aaPredicted RBP27.11■■□□□ 1.93
PPP4R1-221ENST00000582240 RFC4P35249 363 aa27.1■■□□□ 1.93
PPP4R1-221ENST00000582240 SOS1Q07889 1333 aaPredicted RBP27.1■■□□□ 1.93
PPP4R1-221ENST00000582240 CICQ96RK0 1608 aaPredicted RBP27.09■■□□□ 1.93
PPP4R1-221ENST00000582240 POLD1P28340 1107 aa27.08■■□□□ 1.93
PPP4R1-221ENST00000582240 ARXQ96QS3 562 aa27.08■■□□□ 1.93
PPP4R1-221ENST00000582240 ZNF330Q9Y3S2 320 aaPredicted RBP27.08■■□□□ 1.93
PPP4R1-221ENST00000582240 ADRA2BP18089 450 aa27.07■■□□□ 1.92
PPP4R1-221ENST00000582240 CHL1O00533 1208 aa27.06■■□□□ 1.92
PPP4R1-221ENST00000582240 KLHL34Q8N239 644 aa27.06■■□□□ 1.92
PPP4R1-221ENST00000582240 KDM3BQ7LBC6 1761 aa27.05■■□□□ 1.92
PPP4R1-221ENST00000582240 GIGYF1O75420 1035 aaPredicted RBP27.05■■□□□ 1.92
PPP4R1-221ENST00000582240 KRT24Q2M2I5 525 aa27.05■■□□□ 1.92
PPP4R1-221ENST00000582240 MIER1Q8N108 512 aa27.05■■□□□ 1.92
PPP4R1-221ENST00000582240 GYS1P13807 737 aa27.04■■□□□ 1.92
PPP4R1-221ENST00000582240 EIF5P55010 431 aaKnown RBP27.03■■□□□ 1.92
PPP4R1-221ENST00000582240 SRCAPQ6ZRS2 3230 aa27.03■■□□□ 1.92
PPP4R1-221ENST00000582240 COL15A1P39059 1388 aa27.02■■□□□ 1.92
PPP4R1-221ENST00000582240 USPL1Q5W0Q7 1092 aa27.02■■□□□ 1.92
PPP4R1-221ENST00000582240 FHDC1Q9C0D6 1143 aaPredicted RBP27.02■■□□□ 1.92
PPP4R1-221ENST00000582240 BABAM1Q9NWV8 329 aa27.02■■□□□ 1.92
PPP4R1-221ENST00000582240 USP42Q9H9J4 1324 aaKnown RBP27.01■■□□□ 1.91
PPP4R1-221ENST00000582240 NBPF26B4DH59 902 aa27.01■■□□□ 1.91
PPP4R1-221ENST00000582240 FKBP8Q14318 412 aa27.01■■□□□ 1.91
PPP4R1-221ENST00000582240 NBPF10Q6P3W6 841 aaKnown RBP27.01■■□□□ 1.91
PPP4R1-221ENST00000582240 NBPF15Q8N660 670 aa27.01■■□□□ 1.91
PPP4R1-221ENST00000582240 TBC1D2BQ9UPU7 963 aa27.01■■□□□ 1.91
PPP4R1-221ENST00000582240 CFAP44Q96MT7 982 aa27■■□□□ 1.91
PPP4R1-221ENST00000582240 MBIPQ9NS73 344 aa27■■□□□ 1.91
PPP4R1-221ENST00000582240 CCER2I3L3R5 266 aa26.99■■□□□ 1.91
PPP4R1-221ENST00000582240 ZPR1O75312 459 aa26.99■■□□□ 1.91
PPP4R1-221ENST00000582240 MMP10P09238 476 aa26.99■■□□□ 1.91
PPP4R1-221ENST00000582240 ZNF853P0CG23 659 aa26.99■■□□□ 1.91
PPP4R1-221ENST00000582240 EIF2S2P20042 333 aaKnown RBP26.99■■□□□ 1.91
PPP4R1-221ENST00000582240 WWC1Q8IX03 1113 aa26.99■■□□□ 1.91
PPP4R1-221ENST00000582240 NECTIN2Q92692 538 aa26.99■■□□□ 1.91
PPP4R1-221ENST00000582240 IL6STP40189 918 aaPredicted RBP26.98■■□□□ 1.91
PPP4R1-221ENST00000582240 NLGN1Q8N2Q7 840 aa26.98■■□□□ 1.91
PPP4R1-221ENST00000582240 NGEFQ8N5V2 710 aa26.98■■□□□ 1.91
PPP4R1-221ENST00000582240 NARFQ9UHQ1 456 aa26.98■■□□□ 1.91
PPP4R1-221ENST00000582240 C4AP0C0L4 1744 aa26.97■■□□□ 1.91
PPP4R1-221ENST00000582240 SYT17Q9BSW7 474 aa26.97■■□□□ 1.91
PPP4R1-221ENST00000582240 BCL2L12Q9HB09 334 aa26.97■■□□□ 1.91
PPP4R1-221ENST00000582240 COL24A1Q17RW2 1714 aa26.96■■□□□ 1.91
PPP4R1-221ENST00000582240 CCDC27Q2M243 656 aa26.96■■□□□ 1.91
PPP4R1-221ENST00000582240 IFT57Q9NWB7 429 aa26.96■■□□□ 1.91
PPP4R1-221ENST00000582240 A0A087WZG4 1122 aa26.95■■□□□ 1.9
PPP4R1-221ENST00000582240 GNAI1P63096 354 aa26.95■■□□□ 1.9
PPP4R1-221ENST00000582240 MYL6BP14649 208 aa26.94■■□□□ 1.9
PPP4R1-221ENST00000582240 CALD1Q05682 793 aaKnown RBP26.94■■□□□ 1.9
PPP4R1-221ENST00000582240 NPM2Q86SE8 214 aaKnown RBP26.93■■□□□ 1.9
PPP4R1-221ENST00000582240 TSR2Q969E8 191 aaKnown RBP26.93■■□□□ 1.9
PPP4R1-221ENST00000582240 ELL2O00472 640 aaPredicted RBP26.92■■□□□ 1.9
PPP4R1-221ENST00000582240 ANXA1P04083 346 aa26.92■■□□□ 1.9
PPP4R1-221ENST00000582240 BICDL1Q6ZP65 573 aa26.92■■□□□ 1.9
PPP4R1-221ENST00000582240 DZIP3Q86Y13 1208 aaKnown RBP26.92■■□□□ 1.9
PPP4R1-221ENST00000582240 NLGN2Q8NFZ4 835 aa26.92■■□□□ 1.9
PPP4R1-221ENST00000582240 DDR1Q08345 913 aa26.91■■□□□ 1.9
PPP4R1-221ENST00000582240 CAMTA2O94983 1202 aa26.9■■□□□ 1.9
PPP4R1-221ENST00000582240 TM4SF1P30408 202 aa26.9■■□□□ 1.9
PPP4R1-221ENST00000582240 DUSP27Q5VZP5 1158 aa26.9■■□□□ 1.9
PPP4R1-221ENST00000582240 PARP3Q9Y6F1 533 aa26.9■■□□□ 1.9
PPP4R1-221ENST00000582240 NFIXQ14938 502 aa26.89■■□□□ 1.9
PPP4R1-221ENST00000582240 PROSER3Q2NL68 480 aa26.89■■□□□ 1.9
PPP4R1-221ENST00000582240 C8orf58Q8NAV2 365 aa26.89■■□□□ 1.9
PPP4R1-221ENST00000582240 PDIA6Q15084 440 aa26.88■■□□□ 1.89
PPP4R1-221ENST00000582240 TTLL7Q6ZT98 887 aa26.88■■□□□ 1.89
PPP4R1-221ENST00000582240 LAMB4A4D0S4 1761 aa26.87■■□□□ 1.89
PPP4R1-221ENST00000582240 NCBP3Q53F19 620 aaKnown RBP26.87■■□□□ 1.89
PPP4R1-221ENST00000582240 TBC1D9BQ66K14 1250 aa26.87■■□□□ 1.89
PPP4R1-221ENST00000582240 SPINK5Q9NQ38 1064 aaPredicted RBP26.86■■□□□ 1.89
PPP4R1-221ENST00000582240 POLRMTO00411 1230 aaKnown RBP26.85■■□□□ 1.89
PPP4R1-221ENST00000582240 HLFQ16534 295 aa26.84■■□□□ 1.89
PPP4R1-221ENST00000582240 HDGFL1Q5TGJ6 251 aa26.84■■□□□ 1.89
PPP4R1-221ENST00000582240 WDR63Q8IWG1 891 aa26.84■■□□□ 1.89
PPP4R1-221ENST00000582240 TSPYL6Q8N831 410 aa26.84■■□□□ 1.89
PPP4R1-221ENST00000582240 WWC3Q9ULE0 1092 aa26.83■■□□□ 1.89
PPP4R1-221ENST00000582240 IL16Q14005 1332 aa26.83■■□□□ 1.89
PPP4R1-221ENST00000582240 LRP10Q7Z4F1 713 aa26.82■■□□□ 1.88
PPP4R1-221ENST00000582240 CHPF2Q9P2E5 772 aa26.82■■□□□ 1.88
PPP4R1-221ENST00000582240 CD2APQ9Y5K6 639 aa26.82■■□□□ 1.88
PPP4R1-221ENST00000582240 SERPINB2P05120 415 aa26.81■■□□□ 1.88
PPP4R1-221ENST00000582240 AIMP1Q12904 312 aaKnown RBP26.81■■□□□ 1.88
PPP4R1-221ENST00000582240 ZBTB3Q9H5J0 574 aa26.81■■□□□ 1.88
PPP4R1-221ENST00000582240 ERBB4Q15303 1308 aa26.81■■□□□ 1.88
PPP4R1-221ENST00000582240 CCDC24Q8N4L8 307 aa26.8■■□□□ 1.88
PPP4R1-221ENST00000582240 TCERG1O14776 1098 aaKnown RBP26.79■■□□□ 1.88
PPP4R1-221ENST00000582240 HOXB7P09629 217 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms