RNA–Protein interactions for RNA: ENST00000582182.6

TRIM16-223, Transcript of tripartite motif containing 16, human

TSL 5

Gene TRIM16, Length 581 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM16-223	ENST00000582182	PGBD3	Q8N328	593 aa		7.75	□□□□□ -1.17
TRIM16-223	ENST00000582182	NOP53	Q9NZM5	478 aa	Known RBP	7.75	□□□□□ -1.17
TRIM16-223	ENST00000582182	PCDHB11	Q9Y5F2	797 aa		7.75	□□□□□ -1.17
TRIM16-223	ENST00000582182	ERICH3	Q5RHP9	1530 aa		7.74	□□□□□ -1.17
TRIM16-223	ENST00000582182	FGFR3	P22607	806 aa		7.74	□□□□□ -1.17
TRIM16-223	ENST00000582182	CENPC	Q03188	943 aa		7.74	□□□□□ -1.17
TRIM16-223	ENST00000582182	CNKSR1	Q969H4	720 aa		7.74	□□□□□ -1.17
TRIM16-223	ENST00000582182	TRIM34	Q9BYJ4	488 aa		7.74	□□□□□ -1.17
TRIM16-223	ENST00000582182	ESF1	Q9H501	851 aa	Known RBP	7.74	□□□□□ -1.17
TRIM16-223	ENST00000582182	KIF27	Q86VH2	1401 aa		7.74	□□□□□ -1.17
TRIM16-223	ENST00000582182	CHD1	O14646	1710 aa		7.73	□□□□□ -1.17
TRIM16-223	ENST00000582182	SCO2	A0A1W2PP80	73 aa		7.73	□□□□□ -1.17
TRIM16-223	ENST00000582182	BNIP3L	O60238	219 aa		7.73	□□□□□ -1.17
TRIM16-223	ENST00000582182	IL2RA	P01589	272 aa		7.73	□□□□□ -1.17
TRIM16-223	ENST00000582182	FBXO45	P0C2W1	286 aa		7.73	□□□□□ -1.17
TRIM16-223	ENST00000582182	LBR	Q14739	615 aa	Known RBP	7.73	□□□□□ -1.17
TRIM16-223	ENST00000582182	LCE3B	Q5TA77	95 aa		7.73	□□□□□ -1.17
TRIM16-223	ENST00000582182	ZSCAN10	Q96SZ4	725 aa	Predicted RBP	7.73	□□□□□ -1.17
TRIM16-223	ENST00000582182	ESYT1	Q9BSJ8	1104 aa		7.73	□□□□□ -1.17
TRIM16-223	ENST00000582182	SYNJ2	O15056	1496 aa		7.73	□□□□□ -1.17
TRIM16-223	ENST00000582182	NEURL1B	A8MQ27	555 aa		7.72	□□□□□ -1.17
TRIM16-223	ENST00000582182	MSX1	P28360	303 aa		7.72	□□□□□ -1.17
TRIM16-223	ENST00000582182	EFHC2	Q5JST6	749 aa		7.72	□□□□□ -1.17
TRIM16-223	ENST00000582182	RNF135	Q8IUD6	432 aa		7.72	□□□□□ -1.17
TRIM16-223	ENST00000582182	FAM9A	Q8IZU1	332 aa	Predicted RBP	7.72	□□□□□ -1.17
TRIM16-223	ENST00000582182	NDFIP2	Q9NV92	336 aa		7.72	□□□□□ -1.17
TRIM16-223	ENST00000582182	ADAMTS12	P58397	1594 aa		7.71	□□□□□ -1.17
TRIM16-223	ENST00000582182	C4orf17	Q53FE4	359 aa		7.71	□□□□□ -1.18
TRIM16-223	ENST00000582182	KRTAP4-12	Q9BQ66	201 aa		7.71	□□□□□ -1.18
TRIM16-223	ENST00000582182	GNRH1	P01148	92 aa		7.7	□□□□□ -1.18
TRIM16-223	ENST00000582182	ARAF	P10398	606 aa		7.7	□□□□□ -1.18
TRIM16-223	ENST00000582182	RFC5	P40937	340 aa		7.7	□□□□□ -1.18
TRIM16-223	ENST00000582182	GATA4	P43694	442 aa		7.7	□□□□□ -1.18
TRIM16-223	ENST00000582182	FOXD4L6	Q3SYB3	417 aa	Predicted RBP	7.7	□□□□□ -1.18
TRIM16-223	ENST00000582182	GNAS	Q5JWF2	1037 aa		7.7	□□□□□ -1.18
TRIM16-223	ENST00000582182	TMEM214	Q6NUQ4	689 aa	Known RBP	7.7	□□□□□ -1.18
TRIM16-223	ENST00000582182	FOXD4L3	Q6VB84	417 aa	Predicted RBP	7.7	□□□□□ -1.18
TRIM16-223	ENST00000582182	CHSY3	Q70JA7	882 aa		7.7	□□□□□ -1.18
TRIM16-223	ENST00000582182	FHAD1	B1AJZ9	1412 aa		7.69	□□□□□ -1.18
TRIM16-223	ENST00000582182	GTF2E1	P29083	439 aa	Predicted RBP	7.69	□□□□□ -1.18
TRIM16-223	ENST00000582182	HRH3	Q9Y5N1	445 aa		7.69	□□□□□ -1.18
TRIM16-223	ENST00000582182	CUL7	Q14999	1698 aa		7.69	□□□□□ -1.18
TRIM16-223	ENST00000582182	RUSC2	Q8N2Y8	1516 aa		7.68	□□□□□ -1.18
TRIM16-223	ENST00000582182	RSPO4	Q2I0M5	234 aa	Predicted RBP	7.68	□□□□□ -1.18
TRIM16-223	ENST00000582182	FAM117A	Q9C073	453 aa		7.68	□□□□□ -1.18
TRIM16-223	ENST00000582182	FHDC1	Q9C0D6	1143 aa	Predicted RBP	7.68	□□□□□ -1.18
TRIM16-223	ENST00000582182	CLASP1	Q7Z460	1538 aa		7.68	□□□□□ -1.18
TRIM16-223	ENST00000582182	XAGE2	Q96GT9	111 aa		7.67	□□□□□ -1.18
TRIM16-223	ENST00000582182	CARMIL1	Q5VZK9	1371 aa		7.67	□□□□□ -1.18
TRIM16-223	ENST00000582182	GRIN2A	Q12879	1464 aa		7.67	□□□□□ -1.18
TRIM16-223	ENST00000582182	TRIM11	Q96F44	468 aa		7.66	□□□□□ -1.18
TRIM16-223	ENST00000582182	DDRGK1	Q96HY6	314 aa		7.66	□□□□□ -1.18
TRIM16-223	ENST00000582182	NUP160	Q12769	1436 aa		7.65	□□□□□ -1.18
TRIM16-223	ENST00000582182	PLVAP	Q9BX97	442 aa		7.65	□□□□□ -1.18
TRIM16-223	ENST00000582182	CRISPLD1	Q9H336	500 aa		7.65	□□□□□ -1.18
TRIM16-223	ENST00000582182	GPBP1L1	Q9HC44	474 aa	Predicted RBP	7.65	□□□□□ -1.18
TRIM16-223	ENST00000582182	DNAAF2	Q9NVR5	837 aa	Known RBP	7.65	□□□□□ -1.18
TRIM16-223	ENST00000582182	LOC105371045	A0A1W2PR82	267 aa		7.64	□□□□□ -1.19
TRIM16-223	ENST00000582182	SPATA31C1	P0DKV0	1188 aa		7.64	□□□□□ -1.19
TRIM16-223	ENST00000582182	MCCD1	P59942	119 aa	Predicted RBP	7.64	□□□□□ -1.19
TRIM16-223	ENST00000582182	NKAPL	Q5M9Q1	402 aa		7.64	□□□□□ -1.19
TRIM16-223	ENST00000582182	FCHSD1	Q86WN1	690 aa		7.64	□□□□□ -1.19
TRIM16-223	ENST00000582182	GJD4	Q96KN9	370 aa	Predicted RBP	7.64	□□□□□ -1.19
TRIM16-223	ENST00000582182	KDM4C	Q9H3R0	1056 aa		7.64	□□□□□ -1.19
TRIM16-223	ENST00000582182	KLF15	Q9UIH9	416 aa		7.64	□□□□□ -1.19
TRIM16-223	ENST00000582182	ARHGEF11	O15085	1522 aa		7.63	□□□□□ -1.19
TRIM16-223	ENST00000582182	MYC	P01106	439 aa	Predicted RBP	7.63	□□□□□ -1.19
TRIM16-223	ENST00000582182	ADH6	P28332	368 aa		7.63	□□□□□ -1.19
TRIM16-223	ENST00000582182	NR1H3	Q13133	447 aa		7.63	□□□□□ -1.19
TRIM16-223	ENST00000582182	ARTN	Q5T4W7	220 aa		7.63	□□□□□ -1.19
TRIM16-223	ENST00000582182	FIGNL1	Q6PIW4	674 aa		7.63	□□□□□ -1.19
TRIM16-223	ENST00000582182	RHBDD1	Q8TEB9	315 aa		7.63	□□□□□ -1.19
TRIM16-223	ENST00000582182	CDCA7	Q9BWT1	371 aa	Predicted RBP	7.63	□□□□□ -1.19
TRIM16-223	ENST00000582182	ZCCHC2	Q9C0B9	1178 aa	Known RBP	7.63	□□□□□ -1.19
TRIM16-223	ENST00000582182	ZFP64	Q9NPA5	681 aa		7.63	□□□□□ -1.19
TRIM16-223	ENST00000582182	TPSG1	Q9NRR2	321 aa		7.63	□□□□□ -1.19
TRIM16-223	ENST00000582182	PCDHGC4	Q9Y5F7	938 aa		7.63	□□□□□ -1.19
TRIM16-223	ENST00000582182	RIMBP3C	A6NJZ7	1639 aa		7.62	□□□□□ -1.19
TRIM16-223	ENST00000582182	RIMBP3B	A6NNM3	1639 aa		7.62	□□□□□ -1.19
TRIM16-223	ENST00000582182	RIMBP3	Q9UFD9	1639 aa		7.62	□□□□□ -1.19
TRIM16-223	ENST00000582182	CEP170	Q5SW79	1584 aa		7.62	□□□□□ -1.19
TRIM16-223	ENST00000582182	TTBK1	Q5TCY1	1321 aa	Predicted RBP	7.61	□□□□□ -1.19
TRIM16-223	ENST00000582182	SHROOM2	Q13796	1616 aa		7.61	□□□□□ -1.19
TRIM16-223	ENST00000582182	ATXN7	O15265	892 aa	Predicted RBP	7.61	□□□□□ -1.19
TRIM16-223	ENST00000582182	DYRK3	O43781	588 aa		7.61	□□□□□ -1.19
TRIM16-223	ENST00000582182	STAU1	O95793	577 aa	Known RBP	7.61	□□□□□ -1.19
TRIM16-223	ENST00000582182	CD33	P20138	364 aa		7.61	□□□□□ -1.19
TRIM16-223	ENST00000582182	PLA2G4A	P47712	749 aa		7.61	□□□□□ -1.19
TRIM16-223	ENST00000582182	CYB5RL	Q6IPT4	315 aa		7.61	□□□□□ -1.19
TRIM16-223	ENST00000582182	TBC1D9	Q6ZT07	1266 aa		7.61	□□□□□ -1.19
TRIM16-223	ENST00000582182	ZNF592	Q92610	1267 aa		7.61	□□□□□ -1.19
TRIM16-223	ENST00000582182	HCN2	Q9UL51	889 aa		7.61	□□□□□ -1.19
TRIM16-223	ENST00000582182	RAPGEF2	Q9Y4G8	1499 aa		7.61	□□□□□ -1.19
TRIM16-223	ENST00000582182	DCDC2B	A2VCK2	349 aa		7.6	□□□□□ -1.19
TRIM16-223	ENST00000582182	RANGAP1	P46060	587 aa	Predicted RBP	7.6	□□□□□ -1.19
TRIM16-223	ENST00000582182	ESCO1	Q5FWF5	840 aa		7.6	□□□□□ -1.19
TRIM16-223	ENST00000582182	NBPF11	Q86T75	865 aa		7.6	□□□□□ -1.19
TRIM16-223	ENST00000582182	PPARGC1B	Q86YN6	1023 aa	Known RBP	7.6	□□□□□ -1.19
TRIM16-223	ENST00000582182	CCDC85A	Q96PX6	553 aa	Predicted RBP	7.6	□□□□□ -1.19
TRIM16-223	ENST00000582182	ZNF330	Q9Y3S2	320 aa	Predicted RBP	7.6	□□□□□ -1.19

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms