RNA–Protein interactions for RNA: ENST00000582009.5

RAB11FIP4-208, Transcript of RAB11 family interacting protein 4, humanhuman

TSL 3

Gene RAB11FIP4, Length 596 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4-208ENST00000582009 FHDC1Q9C0D6 1143 aaPredicted RBP26.83■■□□□ 1.89
RAB11FIP4-208ENST00000582009 MRS2Q9HD23 443 aa26.82■■□□□ 1.88
RAB11FIP4-208ENST00000582009 CANXP27824 592 aaKnown RBP26.81■■□□□ 1.88
RAB11FIP4-208ENST00000582009 PNISRQ8TF01 805 aaKnown RBP26.81■■□□□ 1.88
RAB11FIP4-208ENST00000582009 CICQ96RK0 1608 aaPredicted RBP26.8■■□□□ 1.88
RAB11FIP4-208ENST00000582009 DCAF8L1A6NGE4 600 aa26.78■■□□□ 1.88
RAB11FIP4-208ENST00000582009 SYT17Q9BSW7 474 aa26.78■■□□□ 1.88
RAB11FIP4-208ENST00000582009 ZBTB1Q9Y2K1 713 aa26.78■■□□□ 1.88
RAB11FIP4-208ENST00000582009 ZNF330Q9Y3S2 320 aaPredicted RBP26.78■■□□□ 1.88
RAB11FIP4-208ENST00000582009 COL24A1Q17RW2 1714 aa26.76■■□□□ 1.88
RAB11FIP4-208ENST00000582009 ZPR1O75312 459 aa26.76■■□□□ 1.87
RAB11FIP4-208ENST00000582009 SNRPA1P09661 255 aaKnown RBP26.76■■□□□ 1.87
RAB11FIP4-208ENST00000582009 NPM2Q86SE8 214 aaKnown RBP26.76■■□□□ 1.87
RAB11FIP4-208ENST00000582009 NLGN1Q8N2Q7 840 aa26.76■■□□□ 1.87
RAB11FIP4-208ENST00000582009 SRP68Q9UHB9 627 aaKnown RBP26.75■■□□□ 1.87
RAB11FIP4-208ENST00000582009 SOS1Q07889 1333 aaPredicted RBP26.74■■□□□ 1.87
RAB11FIP4-208ENST00000582009 APAF1O14727 1248 aa26.74■■□□□ 1.87
RAB11FIP4-208ENST00000582009 TSPYL4Q9UJ04 414 aa26.74■■□□□ 1.87
RAB11FIP4-208ENST00000582009 LAS1LQ9Y4W2 734 aaKnown RBP26.74■■□□□ 1.87
RAB11FIP4-208ENST00000582009 USP16Q9Y5T5 823 aa26.74■■□□□ 1.87
RAB11FIP4-208ENST00000582009 PRAMEF22A3QJZ6 481 aa26.73■■□□□ 1.87
RAB11FIP4-208ENST00000582009 A1BGP04217 495 aa26.73■■□□□ 1.87
RAB11FIP4-208ENST00000582009 GYS1P13807 737 aa26.73■■□□□ 1.87
RAB11FIP4-208ENST00000582009 COL15A1P39059 1388 aa26.72■■□□□ 1.87
RAB11FIP4-208ENST00000582009 MMP10P09238 476 aa26.72■■□□□ 1.87
RAB11FIP4-208ENST00000582009 C4AP0C0L4 1744 aa26.71■■□□□ 1.87
RAB11FIP4-208ENST00000582009 USP42Q9H9J4 1324 aaKnown RBP26.7■■□□□ 1.87
RAB11FIP4-208ENST00000582009 USPL1Q5W0Q7 1092 aa26.7■■□□□ 1.86
RAB11FIP4-208ENST00000582009 TRIM35Q9UPQ4 493 aa26.7■■□□□ 1.86
RAB11FIP4-208ENST00000582009 A0A087WZG4 1122 aa26.69■■□□□ 1.86
RAB11FIP4-208ENST00000582009 KDM3BQ7LBC6 1761 aa26.69■■□□□ 1.86
RAB11FIP4-208ENST00000582009 PIP4K2AP48426 406 aaPredicted RBP26.68■■□□□ 1.86
RAB11FIP4-208ENST00000582009 EIF4A1P60842 406 aaKnown RBP26.68■■□□□ 1.86
RAB11FIP4-208ENST00000582009 PARP3Q9Y6F1 533 aa26.68■■□□□ 1.86
RAB11FIP4-208ENST00000582009 SENP3-EIF4A1A0A087X0R7 540 aa26.67■■□□□ 1.86
RAB11FIP4-208ENST00000582009 EIF5P55010 431 aaKnown RBP26.67■■□□□ 1.86
RAB11FIP4-208ENST00000582009 FKBP8Q14318 412 aa26.67■■□□□ 1.86
RAB11FIP4-208ENST00000582009 NARFQ9UHQ1 456 aa26.67■■□□□ 1.86
RAB11FIP4-208ENST00000582009 IL6STP40189 918 aaPredicted RBP26.66■■□□□ 1.86
RAB11FIP4-208ENST00000582009 PELP1Q8IZL8 1130 aaKnown RBP26.66■■□□□ 1.86
RAB11FIP4-208ENST00000582009 NLGN2Q8NFZ4 835 aa26.65■■□□□ 1.86
RAB11FIP4-208ENST00000582009 BABAM1Q9NWV8 329 aa26.65■■□□□ 1.86
RAB11FIP4-208ENST00000582009 TBC1D2BQ9UPU7 963 aa26.65■■□□□ 1.86
RAB11FIP4-208ENST00000582009 GIGYF1O75420 1035 aaPredicted RBP26.64■■□□□ 1.86
RAB11FIP4-208ENST00000582009 FAM9BQ8IZU0 186 aa26.64■■□□□ 1.86
RAB11FIP4-208ENST00000582009 CD2APQ9Y5K6 639 aa26.64■■□□□ 1.86
RAB11FIP4-208ENST00000582009 GPR162Q16538 588 aa26.61■■□□□ 1.85
RAB11FIP4-208ENST00000582009 CALD1Q05682 793 aaKnown RBP26.6■■□□□ 1.85
RAB11FIP4-208ENST00000582009 BICDL1Q6ZP65 573 aa26.6■■□□□ 1.85
RAB11FIP4-208ENST00000582009 DZIP3Q86Y13 1208 aaKnown RBP26.6■■□□□ 1.85
RAB11FIP4-208ENST00000582009 NGEFQ8N5V2 710 aa26.6■■□□□ 1.85
RAB11FIP4-208ENST00000582009 CHL1O00533 1208 aa26.59■■□□□ 1.85
RAB11FIP4-208ENST00000582009 EIF2S2P20042 333 aaKnown RBP26.59■■□□□ 1.85
RAB11FIP4-208ENST00000582009 NBPF26B4DH59 902 aa26.58■■□□□ 1.85
RAB11FIP4-208ENST00000582009 NBPF10Q6P3W6 841 aaKnown RBP26.58■■□□□ 1.85
RAB11FIP4-208ENST00000582009 NBPF15Q8N660 670 aa26.58■■□□□ 1.85
RAB11FIP4-208ENST00000582009 LAMB4A4D0S4 1761 aa26.58■■□□□ 1.85
RAB11FIP4-208ENST00000582009 CFAP44Q96MT7 982 aa26.57■■□□□ 1.84
RAB11FIP4-208ENST00000582009 BCL2L12Q9HB09 334 aa26.57■■□□□ 1.84
RAB11FIP4-208ENST00000582009 MYL6BP14649 208 aa26.56■■□□□ 1.84
RAB11FIP4-208ENST00000582009 TM4SF1P30408 202 aa26.56■■□□□ 1.84
RAB11FIP4-208ENST00000582009 DDR1Q08345 913 aa26.56■■□□□ 1.84
RAB11FIP4-208ENST00000582009 NFIXQ14938 502 aa26.56■■□□□ 1.84
RAB11FIP4-208ENST00000582009 SALL2Q9Y467 1007 aaPredicted RBP26.56■■□□□ 1.84
RAB11FIP4-208ENST00000582009 NECTIN2Q92692 538 aa26.55■■□□□ 1.84
RAB11FIP4-208ENST00000582009 POLRMTO00411 1230 aaKnown RBP26.54■■□□□ 1.84
RAB11FIP4-208ENST00000582009 GNAI1P63096 354 aa26.54■■□□□ 1.84
RAB11FIP4-208ENST00000582009 WWC3Q9ULE0 1092 aa26.54■■□□□ 1.84
RAB11FIP4-208ENST00000582009 CAMTA2O94983 1202 aa26.53■■□□□ 1.84
RAB11FIP4-208ENST00000582009 KRT24Q2M2I5 525 aa26.53■■□□□ 1.84
RAB11FIP4-208ENST00000582009 MBIPQ9NS73 344 aa26.53■■□□□ 1.84
RAB11FIP4-208ENST00000582009 TBC1D9BQ66K14 1250 aa26.52■■□□□ 1.84
RAB11FIP4-208ENST00000582009 IFT57Q9NWB7 429 aa26.52■■□□□ 1.84
RAB11FIP4-208ENST00000582009 SERPINB2P05120 415 aa26.51■■□□□ 1.83
RAB11FIP4-208ENST00000582009 ZNF652Q9Y2D9 606 aa26.51■■□□□ 1.83
RAB11FIP4-208ENST00000582009 NPHP1O15259 732 aa26.5■■□□□ 1.83
RAB11FIP4-208ENST00000582009 SETDB2Q96T68 719 aa26.5■■□□□ 1.83
RAB11FIP4-208ENST00000582009 A0A0G2JLW4 131 aa26.49■■□□□ 1.83
RAB11FIP4-208ENST00000582009 TGFB2P61812 414 aa26.49■■□□□ 1.83
RAB11FIP4-208ENST00000582009 KIF6Q6ZMV9 814 aa26.49■■□□□ 1.83
RAB11FIP4-208ENST00000582009 SCN7AQ01118 1682 aa26.49■■□□□ 1.83
RAB11FIP4-208ENST00000582009 ZNF853P0CG23 659 aa26.48■■□□□ 1.83
RAB11FIP4-208ENST00000582009 CCDC27Q2M243 656 aa26.48■■□□□ 1.83
RAB11FIP4-208ENST00000582009 WWC1Q8IX03 1113 aa26.48■■□□□ 1.83
RAB11FIP4-208ENST00000582009 C10orf71Q711Q0 1435 aa26.48■■□□□ 1.83
RAB11FIP4-208ENST00000582009 ERBB4Q15303 1308 aa26.47■■□□□ 1.83
RAB11FIP4-208ENST00000582009 ANXA1P04083 346 aa26.46■■□□□ 1.83
RAB11FIP4-208ENST00000582009 DUSP27Q5VZP5 1158 aa26.46■■□□□ 1.83
RAB11FIP4-208ENST00000582009 CLEC4GQ6UXB4 293 aa26.46■■□□□ 1.83
RAB11FIP4-208ENST00000582009 AFDNP55196 1824 aaKnown RBP26.45■■□□□ 1.82
RAB11FIP4-208ENST00000582009 ELL2O00472 640 aaPredicted RBP26.45■■□□□ 1.82
RAB11FIP4-208ENST00000582009 DPEP1P16444 411 aa26.45■■□□□ 1.82
RAB11FIP4-208ENST00000582009 HDGFL1Q5TGJ6 251 aa26.45■■□□□ 1.82
RAB11FIP4-208ENST00000582009 BCORQ6W2J9 1755 aa26.45■■□□□ 1.82
RAB11FIP4-208ENST00000582009 N4BP2Q86UW6 1770 aaPredicted RBP26.45■■□□□ 1.82
RAB11FIP4-208ENST00000582009 KIF13BQ9NQT8 1826 aa26.44■■□□□ 1.82
RAB11FIP4-208ENST00000582009 YBX3P16989 372 aaKnown RBP eCLIP26.44■■□□□ 1.82
RAB11FIP4-208ENST00000582009 DIEXFQ68CQ4 756 aaKnown RBP26.44■■□□□ 1.82
RAB11FIP4-208ENST00000582009 TTLL7Q6ZT98 887 aa26.44■■□□□ 1.82
RAB11FIP4-208ENST00000582009 ZBTB3Q9H5J0 574 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms