RNA–Protein interactions for RNA: ENST00000581438.5

ATG13-228, Transcript of autophagy related 13, humanhuman

TSL 3

Gene ATG13, Length 619 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG13-228ENST00000581438 RRP7AQ9Y3A4 280 aaKnown RBP22.98■■□□□ 1.27
ATG13-228ENST00000581438 SNRPA1P09661 255 aaKnown RBP22.97■■□□□ 1.27
ATG13-228ENST00000581438 CCDC184Q52MB2 194 aa22.97■■□□□ 1.27
ATG13-228ENST00000581438 NLGN1Q8N2Q7 840 aa22.97■■□□□ 1.27
ATG13-228ENST00000581438 FHDC1Q9C0D6 1143 aaPredicted RBP22.97■■□□□ 1.27
ATG13-228ENST00000581438 ZBTB1Q9Y2K1 713 aa22.97■■□□□ 1.27
ATG13-228ENST00000581438 SOS1Q07889 1333 aaPredicted RBP22.97■■□□□ 1.27
ATG13-228ENST00000581438 MIS18AQ9NYP9 233 aa22.96■■□□□ 1.27
ATG13-228ENST00000581438 SYT17Q9BSW7 474 aa22.95■■□□□ 1.26
ATG13-228ENST00000581438 BABAM1Q9NWV8 329 aa22.95■■□□□ 1.26
ATG13-228ENST00000581438 DCAF8L1A6NGE4 600 aa22.94■■□□□ 1.26
ATG13-228ENST00000581438 CANXP27824 592 aaKnown RBP22.94■■□□□ 1.26
ATG13-228ENST00000581438 NPM2Q86SE8 214 aaKnown RBP22.94■■□□□ 1.26
ATG13-228ENST00000581438 KLHL34Q8N239 644 aa22.94■■□□□ 1.26
ATG13-228ENST00000581438 A0A087WZG4 1122 aa22.93■■□□□ 1.26
ATG13-228ENST00000581438 ZPR1O75312 459 aa22.93■■□□□ 1.26
ATG13-228ENST00000581438 TSPYL4Q9UJ04 414 aa22.93■■□□□ 1.26
ATG13-228ENST00000581438 COL15A1P39059 1388 aa22.92■■□□□ 1.26
ATG13-228ENST00000581438 USP42Q9H9J4 1324 aaKnown RBP22.92■■□□□ 1.26
ATG13-228ENST00000581438 APAF1O14727 1248 aa22.92■■□□□ 1.26
ATG13-228ENST00000581438 GYS1P13807 737 aa22.92■■□□□ 1.26
ATG13-228ENST00000581438 TRIM35Q9UPQ4 493 aa22.92■■□□□ 1.26
ATG13-228ENST00000581438 IL6STP40189 918 aaPredicted RBP22.91■■□□□ 1.26
ATG13-228ENST00000581438 USP16Q9Y5T5 823 aa22.91■■□□□ 1.26
ATG13-228ENST00000581438 EIF5P55010 431 aaKnown RBP22.9■■□□□ 1.26
ATG13-228ENST00000581438 EIF4A1P60842 406 aaKnown RBP22.9■■□□□ 1.26
ATG13-228ENST00000581438 SRP68Q9UHB9 627 aaKnown RBP22.9■■□□□ 1.26
ATG13-228ENST00000581438 NARFQ9UHQ1 456 aa22.9■■□□□ 1.26
ATG13-228ENST00000581438 KDM3BQ7LBC6 1761 aa22.9■■□□□ 1.26
ATG13-228ENST00000581438 C4AP0C0L4 1744 aa22.9■■□□□ 1.26
ATG13-228ENST00000581438 A1BGP04217 495 aa22.89■■□□□ 1.25
ATG13-228ENST00000581438 MMP10P09238 476 aa22.89■■□□□ 1.25
ATG13-228ENST00000581438 PRAMEF22A3QJZ6 481 aa22.88■■□□□ 1.25
ATG13-228ENST00000581438 CALD1Q05682 793 aaKnown RBP22.88■■□□□ 1.25
ATG13-228ENST00000581438 ZNF330Q9Y3S2 320 aaPredicted RBP22.88■■□□□ 1.25
ATG13-228ENST00000581438 CD2APQ9Y5K6 639 aa22.88■■□□□ 1.25
ATG13-228ENST00000581438 GIGYF1O75420 1035 aaPredicted RBP22.87■■□□□ 1.25
ATG13-228ENST00000581438 USPL1Q5W0Q7 1092 aa22.87■■□□□ 1.25
ATG13-228ENST00000581438 PARP3Q9Y6F1 533 aa22.87■■□□□ 1.25
ATG13-228ENST00000581438 LAS1LQ9Y4W2 734 aaKnown RBP22.86■■□□□ 1.25
ATG13-228ENST00000581438 FKBP8Q14318 412 aa22.85■■□□□ 1.25
ATG13-228ENST00000581438 CHL1O00533 1208 aa22.84■■□□□ 1.25
ATG13-228ENST00000581438 CFAP44Q96MT7 982 aa22.83■■□□□ 1.25
ATG13-228ENST00000581438 LAMB4A4D0S4 1761 aa22.81■■□□□ 1.24
ATG13-228ENST00000581438 NCBP3Q53F19 620 aaKnown RBP22.81■■□□□ 1.24
ATG13-228ENST00000581438 TBC1D2BQ9UPU7 963 aa22.81■■□□□ 1.24
ATG13-228ENST00000581438 TM4SF1P30408 202 aa22.8■■□□□ 1.24
ATG13-228ENST00000581438 GNAI1P63096 354 aa22.8■■□□□ 1.24
ATG13-228ENST00000581438 CCDC27Q2M243 656 aa22.8■■□□□ 1.24
ATG13-228ENST00000581438 DZIP3Q86Y13 1208 aaKnown RBP22.8■■□□□ 1.24
ATG13-228ENST00000581438 NLGN2Q8NFZ4 835 aa22.8■■□□□ 1.24
ATG13-228ENST00000581438 ERBB4Q15303 1308 aa22.8■■□□□ 1.24
ATG13-228ENST00000581438 PIP4K2AP48426 406 aaPredicted RBP22.79■■□□□ 1.24
ATG13-228ENST00000581438 FAM9BQ8IZU0 186 aa22.79■■□□□ 1.24
ATG13-228ENST00000581438 BCL2L12Q9HB09 334 aa22.79■■□□□ 1.24
ATG13-228ENST00000581438 IFT57Q9NWB7 429 aa22.79■■□□□ 1.24
ATG13-228ENST00000581438 NBPF26B4DH59 902 aa22.78■■□□□ 1.24
ATG13-228ENST00000581438 NBPF10Q6P3W6 841 aaKnown RBP22.78■■□□□ 1.24
ATG13-228ENST00000581438 NBPF15Q8N660 670 aa22.78■■□□□ 1.24
ATG13-228ENST00000581438 CAMTA2O94983 1202 aa22.77■■□□□ 1.24
ATG13-228ENST00000581438 DDR1Q08345 913 aa22.77■■□□□ 1.24
ATG13-228ENST00000581438 NFIXQ14938 502 aa22.77■■□□□ 1.24
ATG13-228ENST00000581438 POLRMTO00411 1230 aaKnown RBP22.76■■□□□ 1.23
ATG13-228ENST00000581438 ZNF853P0CG23 659 aa22.76■■□□□ 1.23
ATG13-228ENST00000581438 EIF2S2P20042 333 aaKnown RBP22.76■■□□□ 1.23
ATG13-228ENST00000581438 TGFB2P61812 414 aa22.76■■□□□ 1.23
ATG13-228ENST00000581438 GPR162Q16538 588 aa22.76■■□□□ 1.23
ATG13-228ENST00000581438 ZNF652Q9Y2D9 606 aa22.76■■□□□ 1.23
ATG13-228ENST00000581438 RGL2O15211 777 aa22.75■■□□□ 1.23
ATG13-228ENST00000581438 CLEC4GQ6UXB4 293 aa22.75■■□□□ 1.23
ATG13-228ENST00000581438 MBIPQ9NS73 344 aa22.75■■□□□ 1.23
ATG13-228ENST00000581438 C10orf71Q711Q0 1435 aa22.74■■□□□ 1.23
ATG13-228ENST00000581438 HOXB7P09629 217 aa22.74■■□□□ 1.23
ATG13-228ENST00000581438 BICDL1Q6ZP65 573 aa22.74■■□□□ 1.23
ATG13-228ENST00000581438 WWC1Q8IX03 1113 aa22.74■■□□□ 1.23
ATG13-228ENST00000581438 PELP1Q8IZL8 1130 aaKnown RBP22.74■■□□□ 1.23
ATG13-228ENST00000581438 SCN7AQ01118 1682 aa22.74■■□□□ 1.23
ATG13-228ENST00000581438 SERPINB2P05120 415 aa22.73■■□□□ 1.23
ATG13-228ENST00000581438 MYL6BP14649 208 aa22.73■■□□□ 1.23
ATG13-228ENST00000581438 NGEFQ8N5V2 710 aa22.73■■□□□ 1.23
ATG13-228ENST00000581438 CCER2I3L3R5 266 aa22.72■■□□□ 1.23
ATG13-228ENST00000581438 TBC1D9BQ66K14 1250 aa22.72■■□□□ 1.23
ATG13-228ENST00000581438 SETDB2Q96T68 719 aa22.72■■□□□ 1.23
ATG13-228ENST00000581438 KIF6Q6ZMV9 814 aa22.71■■□□□ 1.23
ATG13-228ENST00000581438 KIF13BQ9NQT8 1826 aa22.71■■□□□ 1.23
ATG13-228ENST00000581438 KRT24Q2M2I5 525 aa22.7■■□□□ 1.22
ATG13-228ENST00000581438 IL16Q14005 1332 aa22.7■■□□□ 1.22
ATG13-228ENST00000581438 CARMIL3Q8ND23 1372 aa22.7■■□□□ 1.22
ATG13-228ENST00000581438 BCORQ6W2J9 1755 aa22.69■■□□□ 1.22
ATG13-228ENST00000581438 SENP3-EIF4A1A0A087X0R7 540 aa22.69■■□□□ 1.22
ATG13-228ENST00000581438 ERVV-1B6SEH8 477 aa22.69■■□□□ 1.22
ATG13-228ENST00000581438 GRIN3BO60391 1043 aa22.69■■□□□ 1.22
ATG13-228ENST00000581438 DUSP27Q5VZP5 1158 aa22.69■■□□□ 1.22
ATG13-228ENST00000581438 CHMP4AQ9BY43 222 aa22.69■■□□□ 1.22
ATG13-228ENST00000581438 MAP3K15Q6ZN16 1313 aa22.68■■□□□ 1.22
ATG13-228ENST00000581438 HDGFL1Q5TGJ6 251 aa22.68■■□□□ 1.22
ATG13-228ENST00000581438 WDR63Q8IWG1 891 aa22.68■■□□□ 1.22
ATG13-228ENST00000581438 NECTIN2Q92692 538 aa22.68■■□□□ 1.22
ATG13-228ENST00000581438 SALL2Q9Y467 1007 aaPredicted RBP22.68■■□□□ 1.22
ATG13-228ENST00000581438 NPHP1O15259 732 aa22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms