RNA–Protein interactions for RNA: ENST00000580357.1

IFT20-210, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 752 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-210ENST00000580357 MIS18AQ9NYP9 233 aa21.51■■□□□ 1.03
IFT20-210ENST00000580357 RRP7AQ9Y3A4 280 aaKnown RBP21.51■■□□□ 1.03
IFT20-210ENST00000580357 COL5A3P25940 1745 aaPredicted RBP21.51■■□□□ 1.03
IFT20-210ENST00000580357 A0A087WZG4 1122 aa21.5■■□□□ 1.03
IFT20-210ENST00000580357 APAF1O14727 1248 aa21.5■■□□□ 1.03
IFT20-210ENST00000580357 THUMPD2Q9BTF0 503 aaKnown RBP21.5■■□□□ 1.03
IFT20-210ENST00000580357 TRIM35Q9UPQ4 493 aa21.5■■□□□ 1.03
IFT20-210ENST00000580357 UBR2Q8IWV8 1755 aa21.5■■□□□ 1.03
IFT20-210ENST00000580357 ZPR1O75312 459 aa21.49■■□□□ 1.03
IFT20-210ENST00000580357 CALD1Q05682 793 aaKnown RBP21.49■■□□□ 1.03
IFT20-210ENST00000580357 MSL1Q68DK7 614 aa21.49■■□□□ 1.03
IFT20-210ENST00000580357 CANXP27824 592 aaKnown RBP21.48■■□□□ 1.03
IFT20-210ENST00000580357 TSPYL4Q9UJ04 414 aa21.48■■□□□ 1.03
IFT20-210ENST00000580357 USP16Q9Y5T5 823 aa21.48■■□□□ 1.03
IFT20-210ENST00000580357 TJP1Q07157 1748 aa21.48■■□□□ 1.03
IFT20-210ENST00000580357 SOS1Q07889 1333 aaPredicted RBP21.48■■□□□ 1.03
IFT20-210ENST00000580357 MYH14Q7Z406 1995 aaKnown RBP21.47■■□□□ 1.03
IFT20-210ENST00000580357 IL6STP40189 918 aaPredicted RBP21.47■■□□□ 1.03
IFT20-210ENST00000580357 EIF5P55010 431 aaKnown RBP21.47■■□□□ 1.03
IFT20-210ENST00000580357 EIF4A1P60842 406 aaKnown RBP21.47■■□□□ 1.03
IFT20-210ENST00000580357 NCBP3Q53F19 620 aaKnown RBP21.47■■□□□ 1.03
IFT20-210ENST00000580357 SYT17Q9BSW7 474 aa21.47■■□□□ 1.03
IFT20-210ENST00000580357 FHDC1Q9C0D6 1143 aaPredicted RBP21.47■■□□□ 1.03
IFT20-210ENST00000580357 ZBTB1Q9Y2K1 713 aa21.47■■□□□ 1.03
IFT20-210ENST00000580357 GYS1P13807 737 aa21.46■■□□□ 1.03
IFT20-210ENST00000580357 COL24A1Q17RW2 1714 aa21.46■■□□□ 1.03
IFT20-210ENST00000580357 CHL1O00533 1208 aa21.45■■□□□ 1.02
IFT20-210ENST00000580357 GIGYF1O75420 1035 aaPredicted RBP21.45■■□□□ 1.02
IFT20-210ENST00000580357 NARFQ9UHQ1 456 aa21.45■■□□□ 1.02
IFT20-210ENST00000580357 A1BGP04217 495 aa21.44■■□□□ 1.02
IFT20-210ENST00000580357 USP42Q9H9J4 1324 aaKnown RBP21.44■■□□□ 1.02
IFT20-210ENST00000580357 CFAP44Q96MT7 982 aa21.43■■□□□ 1.02
IFT20-210ENST00000580357 CD2APQ9Y5K6 639 aa21.43■■□□□ 1.02
IFT20-210ENST00000580357 COL15A1P39059 1388 aa21.42■■□□□ 1.02
IFT20-210ENST00000580357 CCDC27Q2M243 656 aa21.42■■□□□ 1.02
IFT20-210ENST00000580357 LAS1LQ9Y4W2 734 aaKnown RBP21.42■■□□□ 1.02
IFT20-210ENST00000580357 MMP10P09238 476 aa21.41■■□□□ 1.02
IFT20-210ENST00000580357 USPL1Q5W0Q7 1092 aa21.41■■□□□ 1.02
IFT20-210ENST00000580357 NGEFQ8N5V2 710 aa21.41■■□□□ 1.02
IFT20-210ENST00000580357 PARP3Q9Y6F1 533 aa21.41■■□□□ 1.02
IFT20-210ENST00000580357 PRAMEF22A3QJZ6 481 aa21.4■■□□□ 1.02
IFT20-210ENST00000580357 GNAI1P63096 354 aa21.4■■□□□ 1.02
IFT20-210ENST00000580357 SRP68Q9UHB9 627 aaKnown RBP21.4■■□□□ 1.02
IFT20-210ENST00000580357 FAM9BQ8IZU0 186 aa21.39■■□□□ 1.01
IFT20-210ENST00000580357 KLHL34Q8N239 644 aa21.39■■□□□ 1.01
IFT20-210ENST00000580357 TM4SF1P30408 202 aa21.38■■□□□ 1.01
IFT20-210ENST00000580357 FKBP8Q14318 412 aa21.38■■□□□ 1.01
IFT20-210ENST00000580357 IFT57Q9NWB7 429 aa21.38■■□□□ 1.01
IFT20-210ENST00000580357 ZNF330Q9Y3S2 320 aaPredicted RBP21.38■■□□□ 1.01
IFT20-210ENST00000580357 ERBB4Q15303 1308 aa21.37■■□□□ 1.01
IFT20-210ENST00000580357 CCER2I3L3R5 266 aa21.37■■□□□ 1.01
IFT20-210ENST00000580357 ZNF853P0CG23 659 aa21.37■■□□□ 1.01
IFT20-210ENST00000580357 KDM3BQ7LBC6 1761 aa21.36■■□□□ 1.01
IFT20-210ENST00000580357 RGL2O15211 777 aa21.36■■□□□ 1.01
IFT20-210ENST00000580357 DZIP3Q86Y13 1208 aaKnown RBP21.36■■□□□ 1.01
IFT20-210ENST00000580357 CHMP4AQ9BY43 222 aa21.36■■□□□ 1.01
IFT20-210ENST00000580357 TBC1D2BQ9UPU7 963 aa21.36■■□□□ 1.01
IFT20-210ENST00000580357 HOXB7P09629 217 aa21.35■■□□□ 1.01
IFT20-210ENST00000580357 CLEC4GQ6UXB4 293 aa21.35■■□□□ 1.01
IFT20-210ENST00000580357 WWC1Q8IX03 1113 aa21.35■■□□□ 1.01
IFT20-210ENST00000580357 NBPF26B4DH59 902 aa21.34■■□□□ 1.01
IFT20-210ENST00000580357 NBPF10Q6P3W6 841 aaKnown RBP21.34■■□□□ 1.01
IFT20-210ENST00000580357 NBPF15Q8N660 670 aa21.34■■□□□ 1.01
IFT20-210ENST00000580357 ZNF784Q8NCA9 323 aaPredicted RBP21.34■■□□□ 1.01
IFT20-210ENST00000580357 TGFB2P61812 414 aa21.33■■□□□ 1.01
IFT20-210ENST00000580357 DIEXFQ68CQ4 756 aaKnown RBP21.33■■□□□ 1.01
IFT20-210ENST00000580357 BCL2L12Q9HB09 334 aa21.33■■□□□ 1.01
IFT20-210ENST00000580357 ZNF652Q9Y2D9 606 aa21.33■■□□□ 1.01
IFT20-210ENST00000580357 IL16Q14005 1332 aa21.32■■□□□ 1
IFT20-210ENST00000580357 EIF2S2P20042 333 aaKnown RBP21.32■■□□□ 1
IFT20-210ENST00000580357 WDR63Q8IWG1 891 aa21.32■■□□□ 1
IFT20-210ENST00000580357 MBIPQ9NS73 344 aa21.32■■□□□ 1
IFT20-210ENST00000580357 C4AP0C0L4 1744 aa21.32■■□□□ 1
IFT20-210ENST00000580357 SENP3-EIF4A1A0A087X0R7 540 aa21.31■■□□□ 1
IFT20-210ENST00000580357 POLRMTO00411 1230 aaKnown RBP21.31■■□□□ 1
IFT20-210ENST00000580357 CAMTA2O94983 1202 aa21.31■■□□□ 1
IFT20-210ENST00000580357 PIP4K2AP48426 406 aaPredicted RBP21.31■■□□□ 1
IFT20-210ENST00000580357 NFIXQ14938 502 aa21.31■■□□□ 1
IFT20-210ENST00000580357 ERVV-1B6SEH8 477 aa21.3■■□□□ 1
IFT20-210ENST00000580357 SETDB2Q96T68 719 aa21.3■■□□□ 1
IFT20-210ENST00000580357 SERPINB2P05120 415 aa21.29■■□□□ 1
IFT20-210ENST00000580357 GPR162Q16538 588 aa21.29■■□□□ 1
IFT20-210ENST00000580357 NLGN2Q8NFZ4 835 aa21.29■■□□□ 1
IFT20-210ENST00000580357 MYL6BP14649 208 aa21.28■■□□□ 1
IFT20-210ENST00000580357 DDR1Q08345 913 aa21.28■■□□□ 1
IFT20-210ENST00000580357 DUSP27Q5VZP5 1158 aa21.28■■□□□ 1
IFT20-210ENST00000580357 TBC1D9BQ66K14 1250 aa21.27■■□□□ 1
IFT20-210ENST00000580357 KIF6Q6ZMV9 814 aa21.27■■□□□ 1
IFT20-210ENST00000580357 DDX21Q9NR30 783 aaKnown RBP eCLIP21.27■■□□□ 1
IFT20-210ENST00000580357 PDIA6Q15084 440 aa21.26■□□□□ 0.99
IFT20-210ENST00000580357 HDGFL1Q5TGJ6 251 aa21.26■□□□□ 0.99
IFT20-210ENST00000580357 BICDL1Q6ZP65 573 aa21.26■□□□□ 0.99
IFT20-210ENST00000580357 LAMB4A4D0S4 1761 aa21.25■□□□□ 0.99
IFT20-210ENST00000580357 GRIN3BO60391 1043 aa21.25■□□□□ 0.99
IFT20-210ENST00000580357 DBF4Q9UBU7 674 aaPredicted RBP21.25■□□□□ 0.99
IFT20-210ENST00000580357 SALL2Q9Y467 1007 aaPredicted RBP21.25■□□□□ 0.99
IFT20-210ENST00000580357 MAP3K15Q6ZN16 1313 aa21.25■□□□□ 0.99
IFT20-210ENST00000580357 KRT24Q2M2I5 525 aa21.24■□□□□ 0.99
IFT20-210ENST00000580357 PDZRN3Q9UPQ7 1066 aa21.24■□□□□ 0.99
IFT20-210ENST00000580357 CARMIL3Q8ND23 1372 aa21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms