RNA–Protein interactions for RNA: ENST00000580149.1

TRMT112P3-201, Transcript of tRNA methyltransferase subunit 11-2 pseudogene 3, humanhuman

BASIC

Gene TRMT112P3, Length 358 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT112P3-201ENST00000580149 COL15A1P39059 1388 aa18.07■□□□□ 0.48
TRMT112P3-201ENST00000580149 USP42Q9H9J4 1324 aaKnown RBP18.06■□□□□ 0.48
TRMT112P3-201ENST00000580149 YY1P25490 414 aa18.06■□□□□ 0.48
TRMT112P3-201ENST00000580149 CANXP27824 592 aaKnown RBP18.06■□□□□ 0.48
TRMT112P3-201ENST00000580149 NFE2L2Q16236 605 aa18.06■□□□□ 0.48
TRMT112P3-201ENST00000580149 FMNL2Q96PY5 1086 aa18.06■□□□□ 0.48
TRMT112P3-201ENST00000580149 BRCA1P38398 1863 aaKnown RBP18.05■□□□□ 0.48
TRMT112P3-201ENST00000580149 BCORQ6W2J9 1755 aa18.05■□□□□ 0.48
TRMT112P3-201ENST00000580149 NLGN1Q8N2Q7 840 aa18.05■□□□□ 0.48
TRMT112P3-201ENST00000580149 WWC3Q9ULE0 1092 aa18.05■□□□□ 0.48
TRMT112P3-201ENST00000580149 CD2APQ9Y5K6 639 aa18.05■□□□□ 0.48
TRMT112P3-201ENST00000580149 UTRNP46939 3433 aa18.04■□□□□ 0.48
TRMT112P3-201ENST00000580149 HTATSF1O43719 755 aaKnown RBP18.04■□□□□ 0.48
TRMT112P3-201ENST00000580149 FKBP8Q14318 412 aa18.04■□□□□ 0.48
TRMT112P3-201ENST00000580149 THUMPD2Q9BTF0 503 aaKnown RBP18.04■□□□□ 0.48
TRMT112P3-201ENST00000580149 PNNQ9H307 717 aaKnown RBP18.04■□□□□ 0.48
TRMT112P3-201ENST00000580149 PRKRIP1Q9H875 184 aaPredicted RBP18.04■□□□□ 0.48
TRMT112P3-201ENST00000580149 GOLGB1Q14789 3259 aaKnown RBP18.03■□□□□ 0.48
TRMT112P3-201ENST00000580149 STARD3NLO95772 234 aa18.03■□□□□ 0.48
TRMT112P3-201ENST00000580149 CCDC146Q8IYE0 955 aa18.03■□□□□ 0.48
TRMT112P3-201ENST00000580149 ZNF330Q9Y3S2 320 aaPredicted RBP18.03■□□□□ 0.48
TRMT112P3-201ENST00000580149 ZPR1O75312 459 aa18.02■□□□□ 0.48
TRMT112P3-201ENST00000580149 YBX3P16989 372 aaKnown RBP eCLIP18.02■□□□□ 0.48
TRMT112P3-201ENST00000580149 USPL1Q5W0Q7 1092 aa18.02■□□□□ 0.48
TRMT112P3-201ENST00000580149 C10orf71Q711Q0 1435 aa18.02■□□□□ 0.48
TRMT112P3-201ENST00000580149 MIS18AQ9NYP9 233 aa18.02■□□□□ 0.48
TRMT112P3-201ENST00000580149 PARP3Q9Y6F1 533 aa18.02■□□□□ 0.48
TRMT112P3-201ENST00000580149 PRAMEF22A3QJZ6 481 aa18.01■□□□□ 0.47
TRMT112P3-201ENST00000580149 WDR43Q15061 677 aaKnown RBP eCLIP18.01■□□□□ 0.47
TRMT112P3-201ENST00000580149 NRXN2Q9P2S2 1712 aa18.01■□□□□ 0.47
TRMT112P3-201ENST00000580149 A1BGP04217 495 aa18■□□□□ 0.47
TRMT112P3-201ENST00000580149 DDR1Q08345 913 aa18■□□□□ 0.47
TRMT112P3-201ENST00000580149 TAF7Q15545 349 aaPredicted RBP18■□□□□ 0.47
TRMT112P3-201ENST00000580149 TEX13AQ9BXU3 409 aaPredicted RBP18■□□□□ 0.47
TRMT112P3-201ENST00000580149 PXDNLA1KZ92 1463 aa18■□□□□ 0.47
TRMT112P3-201ENST00000580149 PIP4K2AP48426 406 aaPredicted RBP17.99■□□□□ 0.47
TRMT112P3-201ENST00000580149 NARFQ9UHQ1 456 aa17.99■□□□□ 0.47
TRMT112P3-201ENST00000580149 RRP7AQ9Y3A4 280 aaKnown RBP17.99■□□□□ 0.47
TRMT112P3-201ENST00000580149 ARFGEF1Q9Y6D6 1849 aa17.98■□□□□ 0.47
TRMT112P3-201ENST00000580149 ZNF316A6NFI3 1004 aaPredicted RBP17.98■□□□□ 0.47
TRMT112P3-201ENST00000580149 EIF5P55010 431 aaKnown RBP17.98■□□□□ 0.47
TRMT112P3-201ENST00000580149 USP16Q9Y5T5 823 aa17.98■□□□□ 0.47
TRMT112P3-201ENST00000580149 CACNA1SQ13698 1873 aa17.97■□□□□ 0.47
TRMT112P3-201ENST00000580149 ANKRD31Q8N7Z5 1873 aa17.97■□□□□ 0.47
TRMT112P3-201ENST00000580149 RIPK4P57078 832 aa17.97■□□□□ 0.47
TRMT112P3-201ENST00000580149 BCL2L12Q9HB09 334 aa17.97■□□□□ 0.47
TRMT112P3-201ENST00000580149 DLEC1Q9Y238 1755 aa17.96■□□□□ 0.47
TRMT112P3-201ENST00000580149 SNRPA1P09661 255 aaKnown RBP17.96■□□□□ 0.47
TRMT112P3-201ENST00000580149 TMPOP42166 694 aaKnown RBP17.96■□□□□ 0.47
TRMT112P3-201ENST00000580149 NEUROD2Q15784 382 aa17.96■□□□□ 0.47
TRMT112P3-201ENST00000580149 NUP98P52948 1817 aa17.95■□□□□ 0.46
TRMT112P3-201ENST00000580149 A0A087WZG4 1122 aa17.95■□□□□ 0.46
TRMT112P3-201ENST00000580149 POLRMTO00411 1230 aaKnown RBP17.95■□□□□ 0.46
TRMT112P3-201ENST00000580149 IL6STP40189 918 aaPredicted RBP17.95■□□□□ 0.46
TRMT112P3-201ENST00000580149 NFIXQ14938 502 aa17.95■□□□□ 0.46
TRMT112P3-201ENST00000580149 ADAMTS8Q9UP79 889 aa17.95■□□□□ 0.46
TRMT112P3-201ENST00000580149 TBC1D2BQ9UPU7 963 aa17.95■□□□□ 0.46
TRMT112P3-201ENST00000580149 A0A0G2JLW4 131 aa17.94■□□□□ 0.46
TRMT112P3-201ENST00000580149 TM4SF1P30408 202 aa17.94■□□□□ 0.46
TRMT112P3-201ENST00000580149 BICDL1Q6ZP65 573 aa17.94■□□□□ 0.46
TRMT112P3-201ENST00000580149 PNISRQ8TF01 805 aaKnown RBP17.94■□□□□ 0.46
TRMT112P3-201ENST00000580149 GRIN3BO60391 1043 aa17.93■□□□□ 0.46
TRMT112P3-201ENST00000580149 DPEP1P16444 411 aa17.93■□□□□ 0.46
TRMT112P3-201ENST00000580149 NPM2Q86SE8 214 aaKnown RBP17.93■□□□□ 0.46
TRMT112P3-201ENST00000580149 RUNDC1Q96C34 613 aa17.93■□□□□ 0.46
TRMT112P3-201ENST00000580149 COL11A2P13942 1736 aaPredicted RBP17.92■□□□□ 0.46
TRMT112P3-201ENST00000580149 LMOD3Q0VAK6 560 aa17.92■□□□□ 0.46
TRMT112P3-201ENST00000580149 TSPYL4Q9UJ04 414 aa17.92■□□□□ 0.46
TRMT112P3-201ENST00000580149 EIF4A1P60842 406 aaKnown RBP17.91■□□□□ 0.46
TRMT112P3-201ENST00000580149 TGFB2P61812 414 aa17.91■□□□□ 0.46
TRMT112P3-201ENST00000580149 TBC1D9BQ66K14 1250 aa17.91■□□□□ 0.46
TRMT112P3-201ENST00000580149 DZIP3Q86Y13 1208 aaKnown RBP17.91■□□□□ 0.46
TRMT112P3-201ENST00000580149 NBPF26B4DH59 902 aa17.9■□□□□ 0.46
TRMT112P3-201ENST00000580149 CAMTA2O94983 1202 aa17.9■□□□□ 0.46
TRMT112P3-201ENST00000580149 CCDC184Q52MB2 194 aa17.9■□□□□ 0.46
TRMT112P3-201ENST00000580149 NBPF10Q6P3W6 841 aaKnown RBP17.9■□□□□ 0.46
TRMT112P3-201ENST00000580149 NBPF15Q8N660 670 aa17.9■□□□□ 0.46
TRMT112P3-201ENST00000580149 BCS1LQ9Y276 419 aa17.9■□□□□ 0.46
TRMT112P3-201ENST00000580149 CARMIL3Q8ND23 1372 aa17.9■□□□□ 0.46
TRMT112P3-201ENST00000580149 CCDC88AQ3V6T2 1871 aa17.89■□□□□ 0.45
TRMT112P3-201ENST00000580149 SERPINB2P05120 415 aa17.89■□□□□ 0.45
TRMT112P3-201ENST00000580149 CHRNA5P30532 468 aa17.89■□□□□ 0.45
TRMT112P3-201ENST00000580149 GIGYF1O75420 1035 aaPredicted RBP17.88■□□□□ 0.45
TRMT112P3-201ENST00000580149 NGEFQ8N5V2 710 aa17.87■□□□□ 0.45
TRMT112P3-201ENST00000580149 ZNF784Q8NCA9 323 aaPredicted RBP17.87■□□□□ 0.45
TRMT112P3-201ENST00000580149 TRIM35Q9UPQ4 493 aa17.87■□□□□ 0.45
TRMT112P3-201ENST00000580149 LAS1LQ9Y4W2 734 aaKnown RBP17.87■□□□□ 0.45
TRMT112P3-201ENST00000580149 SBF1O95248 1867 aa17.86■□□□□ 0.45
TRMT112P3-201ENST00000580149 CCDC24Q8N4L8 307 aa17.86■□□□□ 0.45
TRMT112P3-201ENST00000580149 ANKRD36CQ5JPF3 1778 aa17.86■□□□□ 0.45
TRMT112P3-201ENST00000580149 APAF1O14727 1248 aa17.85■□□□□ 0.45
TRMT112P3-201ENST00000580149 KCNA3P22001 575 aa17.85■□□□□ 0.45
TRMT112P3-201ENST00000580149 ARFGEF2Q9Y6D5 1785 aa17.84■□□□□ 0.45
TRMT112P3-201ENST00000580149 SENP3-EIF4A1A0A087X0R7 540 aa17.84■□□□□ 0.45
TRMT112P3-201ENST00000580149 ANP32CO43423 234 aa17.84■□□□□ 0.45
TRMT112P3-201ENST00000580149 MYL6BP14649 208 aa17.84■□□□□ 0.45
TRMT112P3-201ENST00000580149 SETDB2Q96T68 719 aa17.84■□□□□ 0.45
TRMT112P3-201ENST00000580149 PIM2Q9P1W9 311 aa17.84■□□□□ 0.45
TRMT112P3-201ENST00000580149 NPHP1O15259 732 aa17.83■□□□□ 0.44
TRMT112P3-201ENST00000580149 EIF2S2P20042 333 aaKnown RBP17.83■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms