RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 LMOD3Q0VAK6 560 aa31.53■■■□□ 2.64
LIMD2-207ENST00000579329 SENP3-EIF4A1A0A087X0R7 540 aa31.52■■■□□ 2.64
LIMD2-207ENST00000579329 ARHGEF1Q92888 912 aaKnown RBP31.52■■■□□ 2.64
LIMD2-207ENST00000579329 TEX13AQ9BXU3 409 aaPredicted RBP31.52■■■□□ 2.64
LIMD2-207ENST00000579329 GOLGB1Q14789 3259 aaKnown RBP31.51■■■□□ 2.63
LIMD2-207ENST00000579329 STARD3NLO95772 234 aa31.51■■■□□ 2.63
LIMD2-207ENST00000579329 C1QTNF8P60827 252 aa31.51■■■□□ 2.63
LIMD2-207ENST00000579329 PNISRQ8TF01 805 aaKnown RBP31.51■■■□□ 2.63
LIMD2-207ENST00000579329 RFC4P35249 363 aa31.5■■■□□ 2.63
LIMD2-207ENST00000579329 THUMPD2Q9BTF0 503 aaKnown RBP31.5■■■□□ 2.63
LIMD2-207ENST00000579329 CCDC184Q52MB2 194 aa31.49■■■□□ 2.63
LIMD2-207ENST00000579329 C4AP0C0L4 1744 aa31.49■■■□□ 2.63
LIMD2-207ENST00000579329 ZBTB1Q9Y2K1 713 aa31.48■■■□□ 2.63
LIMD2-207ENST00000579329 RRP7AQ9Y3A4 280 aaKnown RBP31.48■■■□□ 2.63
LIMD2-207ENST00000579329 SOS1Q07889 1333 aaPredicted RBP31.48■■■□□ 2.63
LIMD2-207ENST00000579329 PELP1Q8IZL8 1130 aaKnown RBP31.46■■■□□ 2.63
LIMD2-207ENST00000579329 KDM3BQ7LBC6 1761 aa31.45■■■□□ 2.63
LIMD2-207ENST00000579329 NEUROD2Q15784 382 aa31.45■■■□□ 2.63
LIMD2-207ENST00000579329 MIS18AQ9NYP9 233 aa31.45■■■□□ 2.63
LIMD2-207ENST00000579329 MRS2Q9HD23 443 aa31.44■■■□□ 2.62
LIMD2-207ENST00000579329 SNRPA1P09661 255 aaKnown RBP31.43■■■□□ 2.62
LIMD2-207ENST00000579329 NLGN1Q8N2Q7 840 aa31.43■■■□□ 2.62
LIMD2-207ENST00000579329 COL15A1P39059 1388 aa31.43■■■□□ 2.62
LIMD2-207ENST00000579329 CANXP27824 592 aaKnown RBP31.42■■■□□ 2.62
LIMD2-207ENST00000579329 NLGN2Q8NFZ4 835 aa31.42■■■□□ 2.62
LIMD2-207ENST00000579329 USP42Q9H9J4 1324 aaKnown RBP31.42■■■□□ 2.62
LIMD2-207ENST00000579329 GYS1P13807 737 aa31.41■■■□□ 2.62
LIMD2-207ENST00000579329 SRP68Q9UHB9 627 aaKnown RBP31.4■■■□□ 2.62
LIMD2-207ENST00000579329 BABAM1Q9NWV8 329 aa31.38■■■□□ 2.61
LIMD2-207ENST00000579329 TRIM35Q9UPQ4 493 aa31.38■■■□□ 2.61
LIMD2-207ENST00000579329 USP16Q9Y5T5 823 aa31.38■■■□□ 2.61
LIMD2-207ENST00000579329 PRAMEF22A3QJZ6 481 aa31.37■■■□□ 2.61
LIMD2-207ENST00000579329 APAF1O14727 1248 aa31.37■■■□□ 2.61
LIMD2-207ENST00000579329 ZPR1O75312 459 aa31.37■■■□□ 2.61
LIMD2-207ENST00000579329 MMP10P09238 476 aa31.37■■■□□ 2.61
LIMD2-207ENST00000579329 EIF5P55010 431 aaKnown RBP31.37■■■□□ 2.61
LIMD2-207ENST00000579329 TSPYL4Q9UJ04 414 aa31.37■■■□□ 2.61
LIMD2-207ENST00000579329 A1BGP04217 495 aa31.36■■■□□ 2.61
LIMD2-207ENST00000579329 EIF4A1P60842 406 aaKnown RBP31.36■■■□□ 2.61
LIMD2-207ENST00000579329 A0A087WZG4 1122 aa31.35■■■□□ 2.61
LIMD2-207ENST00000579329 GIGYF1O75420 1035 aaPredicted RBP31.35■■■□□ 2.61
LIMD2-207ENST00000579329 IL6STP40189 918 aaPredicted RBP31.35■■■□□ 2.61
LIMD2-207ENST00000579329 NARFQ9UHQ1 456 aa31.35■■■□□ 2.61
LIMD2-207ENST00000579329 LAMB4A4D0S4 1761 aa31.34■■■□□ 2.61
LIMD2-207ENST00000579329 USPL1Q5W0Q7 1092 aa31.33■■■□□ 2.61
LIMD2-207ENST00000579329 CD2APQ9Y5K6 639 aa31.33■■■□□ 2.61
LIMD2-207ENST00000579329 FKBP8Q14318 412 aa31.32■■■□□ 2.6
LIMD2-207ENST00000579329 NPM2Q86SE8 214 aaKnown RBP31.32■■■□□ 2.6
LIMD2-207ENST00000579329 ZNF330Q9Y3S2 320 aaPredicted RBP31.32■■■□□ 2.6
LIMD2-207ENST00000579329 YBX3P16989 372 aaKnown RBP eCLIP31.31■■■□□ 2.6
LIMD2-207ENST00000579329 PARP3Q9Y6F1 533 aa31.3■■■□□ 2.6
LIMD2-207ENST00000579329 CHL1O00533 1208 aa31.27■■■□□ 2.6
LIMD2-207ENST00000579329 PIP4K2AP48426 406 aaPredicted RBP31.26■■■□□ 2.59
LIMD2-207ENST00000579329 BCL2L12Q9HB09 334 aa31.26■■■□□ 2.59
LIMD2-207ENST00000579329 LAS1LQ9Y4W2 734 aaKnown RBP31.26■■■□□ 2.59
LIMD2-207ENST00000579329 SCN7AQ01118 1682 aa31.25■■■□□ 2.59
LIMD2-207ENST00000579329 GRIN3BO60391 1043 aa31.25■■■□□ 2.59
LIMD2-207ENST00000579329 CALD1Q05682 793 aaKnown RBP31.25■■■□□ 2.59
LIMD2-207ENST00000579329 TBC1D2BQ9UPU7 963 aa31.24■■■□□ 2.59
LIMD2-207ENST00000579329 NBPF26B4DH59 902 aa31.23■■■□□ 2.59
LIMD2-207ENST00000579329 TM4SF1P30408 202 aa31.23■■■□□ 2.59
LIMD2-207ENST00000579329 DDR1Q08345 913 aa31.23■■■□□ 2.59
LIMD2-207ENST00000579329 NBPF10Q6P3W6 841 aaKnown RBP31.23■■■□□ 2.59
LIMD2-207ENST00000579329 NBPF15Q8N660 670 aa31.23■■■□□ 2.59
LIMD2-207ENST00000579329 C10orf71Q711Q0 1435 aa31.23■■■□□ 2.59
LIMD2-207ENST00000579329 DZIP3Q86Y13 1208 aaKnown RBP31.22■■■□□ 2.59
LIMD2-207ENST00000579329 CFAP44Q96MT7 982 aa31.22■■■□□ 2.59
LIMD2-207ENST00000579329 NFIXQ14938 502 aa31.21■■■□□ 2.59
LIMD2-207ENST00000579329 CEP350Q5VT06 3117 aa31.21■■■□□ 2.59
LIMD2-207ENST00000579329 KIF13BQ9NQT8 1826 aa31.2■■■□□ 2.59
LIMD2-207ENST00000579329 POLRMTO00411 1230 aaKnown RBP31.2■■■□□ 2.59
LIMD2-207ENST00000579329 CAMTA2O94983 1202 aa31.19■■■□□ 2.58
LIMD2-207ENST00000579329 BCORQ6W2J9 1755 aa31.19■■■□□ 2.58
LIMD2-207ENST00000579329 ERBB4Q15303 1308 aa31.19■■■□□ 2.58
LIMD2-207ENST00000579329 IFT57Q9NWB7 429 aa31.18■■■□□ 2.58
LIMD2-207ENST00000579329 GNAI1P63096 354 aa31.17■■■□□ 2.58
LIMD2-207ENST00000579329 CCDC27Q2M243 656 aa31.17■■■□□ 2.58
LIMD2-207ENST00000579329 FAM9BQ8IZU0 186 aa31.17■■■□□ 2.58
LIMD2-207ENST00000579329 ATP10DQ9P241 1426 aa31.16■■■□□ 2.58
LIMD2-207ENST00000579329 ZNF853P0CG23 659 aa31.16■■■□□ 2.58
LIMD2-207ENST00000579329 NCBP3Q53F19 620 aaKnown RBP31.16■■■□□ 2.58
LIMD2-207ENST00000579329 MBIPQ9NS73 344 aa31.15■■■□□ 2.58
LIMD2-207ENST00000579329 EIF2S2P20042 333 aaKnown RBP31.14■■■□□ 2.58
LIMD2-207ENST00000579329 TGFB2P61812 414 aa31.14■■■□□ 2.58
LIMD2-207ENST00000579329 TBC1D9BQ66K14 1250 aa31.14■■■□□ 2.58
LIMD2-207ENST00000579329 BICDL1Q6ZP65 573 aa31.14■■■□□ 2.58
LIMD2-207ENST00000579329 KRT24Q2M2I5 525 aa31.13■■■□□ 2.57
LIMD2-207ENST00000579329 ZNF652Q9Y2D9 606 aa31.13■■■□□ 2.57
LIMD2-207ENST00000579329 PXDNLA1KZ92 1463 aa31.13■■■□□ 2.57
LIMD2-207ENST00000579329 RGL2O15211 777 aa31.12■■■□□ 2.57
LIMD2-207ENST00000579329 SERPINB2P05120 415 aa31.12■■■□□ 2.57
LIMD2-207ENST00000579329 MYL6BP14649 208 aa31.12■■■□□ 2.57
LIMD2-207ENST00000579329 NRXN2Q9P2S2 1712 aa31.12■■■□□ 2.57
LIMD2-207ENST00000579329 HOXB7P09629 217 aa31.11■■■□□ 2.57
LIMD2-207ENST00000579329 CLEC4GQ6UXB4 293 aa31.11■■■□□ 2.57
LIMD2-207ENST00000579329 WWC1Q8IX03 1113 aa31.11■■■□□ 2.57
LIMD2-207ENST00000579329 KIAA1551Q9HCM1 1747 aa31.11■■■□□ 2.57
LIMD2-207ENST00000579329 AFDNP55196 1824 aaKnown RBP31.1■■■□□ 2.57
LIMD2-207ENST00000579329 CARMIL3Q8ND23 1372 aa31.1■■■□□ 2.57
LIMD2-207ENST00000579329 NGEFQ8N5V2 710 aa31.1■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms