RNA–Protein interactions for RNA: ENST00000579221.5

SLC6A4-205, Transcript of solute carrier family 6 member 4, humanhuman

TSL 1 (best)

Gene SLC6A4, Length 1,069 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A4-205ENST00000579221 FLAD1Q8NFF5 587 aa20.15■□□□□ 0.82
SLC6A4-205ENST00000579221 RTCBQ9Y3I0 505 aaKnown RBP20.15■□□□□ 0.82
SLC6A4-205ENST00000579221 FANCIQ9NVI1 1328 aa20.14■□□□□ 0.81
SLC6A4-205ENST00000579221 A1BGP04217 495 aa20.14■□□□□ 0.81
SLC6A4-205ENST00000579221 HOXB7P09629 217 aa20.14■□□□□ 0.81
SLC6A4-205ENST00000579221 SLFN5Q08AF3 891 aa20.14■□□□□ 0.81
SLC6A4-205ENST00000579221 KRT24Q2M2I5 525 aa20.14■□□□□ 0.81
SLC6A4-205ENST00000579221 CHMP4AQ9BY43 222 aa20.14■□□□□ 0.81
SLC6A4-205ENST00000579221 EIF2S2P20042 333 aaKnown RBP20.13■□□□□ 0.81
SLC6A4-205ENST00000579221 CANXP27824 592 aaKnown RBP20.13■□□□□ 0.81
SLC6A4-205ENST00000579221 C8orf58Q8NAV2 365 aa20.13■□□□□ 0.81
SLC6A4-205ENST00000579221 SOS1Q07889 1333 aaPredicted RBP20.12■□□□□ 0.81
SLC6A4-205ENST00000579221 ELL2O00472 640 aaPredicted RBP20.12■□□□□ 0.81
SLC6A4-205ENST00000579221 SSFA2P28290 1259 aa20.12■□□□□ 0.81
SLC6A4-205ENST00000579221 TRAPPC3LQ5T215 181 aa20.12■□□□□ 0.81
SLC6A4-205ENST00000579221 CDCA7LQ96GN5 454 aa20.12■□□□□ 0.81
SLC6A4-205ENST00000579221 C5P01031 1676 aa20.12■□□□□ 0.81
SLC6A4-205ENST00000579221 C4BP0C0L5 1744 aa20.11■□□□□ 0.81
SLC6A4-205ENST00000579221 ZBED9Q6R2W3 1325 aa20.11■□□□□ 0.81
SLC6A4-205ENST00000579221 PSDA5PKW4 1024 aaPredicted RBP20.11■□□□□ 0.81
SLC6A4-205ENST00000579221 NPM2Q86SE8 214 aaKnown RBP20.11■□□□□ 0.81
SLC6A4-205ENST00000579221 ZBTB1Q9Y2K1 713 aa20.11■□□□□ 0.81
SLC6A4-205ENST00000579221 TJP1Q07157 1748 aa20.1■□□□□ 0.81
SLC6A4-205ENST00000579221 CICQ96RK0 1608 aaPredicted RBP20.1■□□□□ 0.81
SLC6A4-205ENST00000579221 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.1■□□□□ 0.81
SLC6A4-205ENST00000579221 MSH5O43196 834 aa20.1■□□□□ 0.81
SLC6A4-205ENST00000579221 PHF14O94880 888 aa20.1■□□□□ 0.81
SLC6A4-205ENST00000579221 ADRA2BP18089 450 aa20.1■□□□□ 0.81
SLC6A4-205ENST00000579221 EXOSC9Q06265 439 aaKnown RBP20.1■□□□□ 0.81
SLC6A4-205ENST00000579221 TWISTNBQ3B726 338 aaPredicted RBP20.1■□□□□ 0.81
SLC6A4-205ENST00000579221 TRMT2AQ8IZ69 625 aaKnown RBP20.1■□□□□ 0.81
SLC6A4-205ENST00000579221 TAF1LQ8IZX4 1826 aa20.1■□□□□ 0.81
SLC6A4-205ENST00000579221 PNPLA7Q6ZV29 1317 aa20.09■□□□□ 0.81
SLC6A4-205ENST00000579221 IL6STP40189 918 aaPredicted RBP20.09■□□□□ 0.81
SLC6A4-205ENST00000579221 HDGFL1Q5TGJ6 251 aa20.09■□□□□ 0.81
SLC6A4-205ENST00000579221 COL23A1Q86Y22 540 aaPredicted RBP20.09■□□□□ 0.81
SLC6A4-205ENST00000579221 TSPYL6Q8N831 410 aa20.09■□□□□ 0.81
SLC6A4-205ENST00000579221 ERBB4Q15303 1308 aa20.08■□□□□ 0.81
SLC6A4-205ENST00000579221 A0A087WZG4 1122 aa20.08■□□□□ 0.81
SLC6A4-205ENST00000579221 EIF5P55010 431 aaKnown RBP20.08■□□□□ 0.81
SLC6A4-205ENST00000579221 SMIM5Q71RC9 77 aa20.08■□□□□ 0.81
SLC6A4-205ENST00000579221 NECTIN2Q92692 538 aa20.08■□□□□ 0.81
SLC6A4-205ENST00000579221 ARHGEF1Q92888 912 aaKnown RBP20.08■□□□□ 0.81
SLC6A4-205ENST00000579221 RFC4P35249 363 aa20.07■□□□□ 0.8
SLC6A4-205ENST00000579221 CCDC30Q5VVM6 783 aa20.07■□□□□ 0.8
SLC6A4-205ENST00000579221 AMIGO3Q86WK7 504 aa20.07■□□□□ 0.8
SLC6A4-205ENST00000579221 COL5A3P25940 1745 aaPredicted RBP20.07■□□□□ 0.8
SLC6A4-205ENST00000579221 NBPF26B4DH59 902 aa20.06■□□□□ 0.8
SLC6A4-205ENST00000579221 VAMP4O75379 141 aa20.06■□□□□ 0.8
SLC6A4-205ENST00000579221 PIP4K2AP48426 406 aaPredicted RBP20.06■□□□□ 0.8
SLC6A4-205ENST00000579221 NBPF10Q6P3W6 841 aaKnown RBP20.06■□□□□ 0.8
SLC6A4-205ENST00000579221 NBPF15Q8N660 670 aa20.06■□□□□ 0.8
SLC6A4-205ENST00000579221 SLC16A10Q8TF71 515 aa20.06■□□□□ 0.8
SLC6A4-205ENST00000579221 ZNF330Q9Y3S2 320 aaPredicted RBP20.06■□□□□ 0.8
SLC6A4-205ENST00000579221 MYL6BP14649 208 aa20.05■□□□□ 0.8
SLC6A4-205ENST00000579221 ARXQ96QS3 562 aa20.05■□□□□ 0.8
SLC6A4-205ENST00000579221 DBF4Q9UBU7 674 aaPredicted RBP20.05■□□□□ 0.8
SLC6A4-205ENST00000579221 DDX21Q9NR30 783 aaKnown RBP eCLIP20.04■□□□□ 0.8
SLC6A4-205ENST00000579221 ZPR1O75312 459 aa20.03■□□□□ 0.8
SLC6A4-205ENST00000579221 PDIA6Q15084 440 aa20.03■□□□□ 0.8
SLC6A4-205ENST00000579221 PDGFDQ9GZP0 370 aaPredicted RBP20.03■□□□□ 0.8
SLC6A4-205ENST00000579221 COL15A1P39059 1388 aa20.03■□□□□ 0.8
SLC6A4-205ENST00000579221 YTHDC1Q96MU7 727 aaKnown RBP20.02■□□□□ 0.8
SLC6A4-205ENST00000579221 STK31Q9BXU1 1019 aa20.02■□□□□ 0.8
SLC6A4-205ENST00000579221 HYPKQ9NX55 129 aa20.02■□□□□ 0.8
SLC6A4-205ENST00000579221 CHPF2Q9P2E5 772 aa20.02■□□□□ 0.8
SLC6A4-205ENST00000579221 MYH14Q7Z406 1995 aaKnown RBP20.01■□□□□ 0.79
SLC6A4-205ENST00000579221 DZIP3Q86Y13 1208 aaKnown RBP20.01■□□□□ 0.79
SLC6A4-205ENST00000579221 NARFQ9UHQ1 456 aa20.01■□□□□ 0.79
SLC6A4-205ENST00000579221 TBC1D2BQ9UPU7 963 aa20.01■□□□□ 0.79
SLC6A4-205ENST00000579221 ANXA1P04083 346 aa20■□□□□ 0.79
SLC6A4-205ENST00000579221 CT47B1P0C2W7 299 aaPredicted RBP20■□□□□ 0.79
SLC6A4-205ENST00000579221 LAMB4A4D0S4 1761 aa19.99■□□□□ 0.79
SLC6A4-205ENST00000579221 PROSER3Q2NL68 480 aa19.99■□□□□ 0.79
SLC6A4-205ENST00000579221 USPL1Q5W0Q7 1092 aa19.99■□□□□ 0.79
SLC6A4-205ENST00000579221 ZNF428Q96B54 188 aa19.99■□□□□ 0.79
SLC6A4-205ENST00000579221 MTFR1LQ9H019 292 aa19.99■□□□□ 0.79
SLC6A4-205ENST00000579221 UBR3Q6ZT12 1888 aa19.99■□□□□ 0.79
SLC6A4-205ENST00000579221 ZBTB7AO95365 584 aa19.98■□□□□ 0.79
SLC6A4-205ENST00000579221 SLC4A2P04920 1241 aa19.98■□□□□ 0.79
SLC6A4-205ENST00000579221 KIF6Q6ZMV9 814 aa19.98■□□□□ 0.79
SLC6A4-205ENST00000579221 COPS6Q7L5N1 327 aa19.98■□□□□ 0.79
SLC6A4-205ENST00000579221 LRP10Q7Z4F1 713 aa19.98■□□□□ 0.79
SLC6A4-205ENST00000579221 NLGN1Q8N2Q7 840 aa19.98■□□□□ 0.79
SLC6A4-205ENST00000579221 SRP68Q9UHB9 627 aaKnown RBP19.98■□□□□ 0.79
SLC6A4-205ENST00000579221 QSER1Q2KHR3 1735 aa19.98■□□□□ 0.79
SLC6A4-205ENST00000579221 USP42Q9H9J4 1324 aaKnown RBP19.98■□□□□ 0.79
SLC6A4-205ENST00000579221 TCERG1O14776 1098 aaKnown RBP19.97■□□□□ 0.79
SLC6A4-205ENST00000579221 GYS1P13807 737 aa19.97■□□□□ 0.79
SLC6A4-205ENST00000579221 AIMP1Q12904 312 aaKnown RBP19.97■□□□□ 0.79
SLC6A4-205ENST00000579221 XAGE3Q8WTP9 111 aa19.97■□□□□ 0.79
SLC6A4-205ENST00000579221 ATF5Q9Y2D1 282 aaPredicted RBP19.97■□□□□ 0.79
SLC6A4-205ENST00000579221 TTLL7Q6ZT98 887 aa19.96■□□□□ 0.79
SLC6A4-205ENST00000579221 SPON1Q9HCB6 807 aa19.96■□□□□ 0.79
SLC6A4-205ENST00000579221 ERVV-1B6SEH8 477 aa19.95■□□□□ 0.78
SLC6A4-205ENST00000579221 CAMTA2O94983 1202 aa19.95■□□□□ 0.78
SLC6A4-205ENST00000579221 CLEC4GQ6UXB4 293 aa19.95■□□□□ 0.78
SLC6A4-205ENST00000579221 RGL2O15211 777 aa19.94■□□□□ 0.78
SLC6A4-205ENST00000579221 MSL1Q68DK7 614 aa19.94■□□□□ 0.78
SLC6A4-205ENST00000579221 PHAXQ9H814 394 aaKnown RBP19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms