RNA–Protein interactions for RNA: ENST00000578917.1

TRAF4-213, Transcript of TNF receptor associated factor 4, humanhuman

TSL 4

Gene TRAF4, Length 484 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-213ENST00000578917 HEG1Q9ULI3 1381 aa8.58□□□□□ -1.04
TRAF4-213ENST00000578917 APAF1O14727 1248 aa8.57□□□□□ -1.04
TRAF4-213ENST00000578917 BICDL1Q6ZP65 573 aa8.57□□□□□ -1.04
TRAF4-213ENST00000578917 TBC1D2BQ9UPU7 963 aa8.57□□□□□ -1.04
TRAF4-213ENST00000578917 USP16Q9Y5T5 823 aa8.57□□□□□ -1.04
TRAF4-213ENST00000578917 TOGARAM1Q9Y4F4 1720 aa8.57□□□□□ -1.04
TRAF4-213ENST00000578917 IL6STP40189 918 aaPredicted RBP8.56□□□□□ -1.04
TRAF4-213ENST00000578917 PIP4K2AP48426 406 aaPredicted RBP8.56□□□□□ -1.04
TRAF4-213ENST00000578917 CALD1Q05682 793 aaKnown RBP8.56□□□□□ -1.04
TRAF4-213ENST00000578917 FKBP8Q14318 412 aa8.56□□□□□ -1.04
TRAF4-213ENST00000578917 NGEFQ8N5V2 710 aa8.56□□□□□ -1.04
TRAF4-213ENST00000578917 NLGN2Q8NFZ4 835 aa8.56□□□□□ -1.04
TRAF4-213ENST00000578917 NARFQ9UHQ1 456 aa8.56□□□□□ -1.04
TRAF4-213ENST00000578917 ITGB4P16144 1822 aa8.56□□□□□ -1.04
TRAF4-213ENST00000578917 SOS1Q07889 1333 aaPredicted RBP8.55□□□□□ -1.04
TRAF4-213ENST00000578917 USP42Q9H9J4 1324 aaKnown RBP8.55□□□□□ -1.04
TRAF4-213ENST00000578917 PAPPAQ13219 1627 aa8.55□□□□□ -1.04
TRAF4-213ENST00000578917 LY75O60449 1722 aa8.55□□□□□ -1.04
TRAF4-213ENST00000578917 C4BP0C0L5 1744 aa8.55□□□□□ -1.04
TRAF4-213ENST00000578917 PRAMEF22A3QJZ6 481 aa8.55□□□□□ -1.04
TRAF4-213ENST00000578917 EIF2S2P20042 333 aaKnown RBP8.55□□□□□ -1.04
TRAF4-213ENST00000578917 EIF5P55010 431 aaKnown RBP8.55□□□□□ -1.04
TRAF4-213ENST00000578917 CCDC184Q52MB2 194 aa8.55□□□□□ -1.04
TRAF4-213ENST00000578917 WWC3Q9ULE0 1092 aa8.55□□□□□ -1.04
TRAF4-213ENST00000578917 MRC1P22897 1456 aa8.54□□□□□ -1.04
TRAF4-213ENST00000578917 COL15A1P39059 1388 aa8.54□□□□□ -1.04
TRAF4-213ENST00000578917 SENP3-EIF4A1A0A087X0R7 540 aa8.54□□□□□ -1.04
TRAF4-213ENST00000578917 GRIN3BO60391 1043 aa8.54□□□□□ -1.04
TRAF4-213ENST00000578917 GIGYF1O75420 1035 aaPredicted RBP8.54□□□□□ -1.04
TRAF4-213ENST00000578917 MYL6BP14649 208 aa8.54□□□□□ -1.04
TRAF4-213ENST00000578917 EIF4A1P60842 406 aaKnown RBP8.54□□□□□ -1.04
TRAF4-213ENST00000578917 DZIP3Q86Y13 1208 aaKnown RBP8.54□□□□□ -1.04
TRAF4-213ENST00000578917 FAM9BQ8IZU0 186 aa8.54□□□□□ -1.04
TRAF4-213ENST00000578917 BABAM1Q9NWV8 329 aa8.54□□□□□ -1.04
TRAF4-213ENST00000578917 C5P01031 1676 aa8.53□□□□□ -1.04
TRAF4-213ENST00000578917 A0A0G2JLW4 131 aa8.53□□□□□ -1.04
TRAF4-213ENST00000578917 YY1P25490 414 aa8.53□□□□□ -1.04
TRAF4-213ENST00000578917 NECTIN2Q92692 538 aa8.53□□□□□ -1.04
TRAF4-213ENST00000578917 SETDB2Q96T68 719 aa8.53□□□□□ -1.04
TRAF4-213ENST00000578917 TRIM35Q9UPQ4 493 aa8.53□□□□□ -1.04
TRAF4-213ENST00000578917 ZNF652Q9Y2D9 606 aa8.53□□□□□ -1.04
TRAF4-213ENST00000578917 SALL2Q9Y467 1007 aaPredicted RBP8.53□□□□□ -1.04
TRAF4-213ENST00000578917 CASZ1Q86V15 1759 aa8.53□□□□□ -1.04
TRAF4-213ENST00000578917 CHL1O00533 1208 aa8.52□□□□□ -1.05
TRAF4-213ENST00000578917 SERPINB2P05120 415 aa8.52□□□□□ -1.05
TRAF4-213ENST00000578917 GTF2E1P29083 439 aaPredicted RBP8.52□□□□□ -1.05
TRAF4-213ENST00000578917 TM4SF1P30408 202 aa8.52□□□□□ -1.05
TRAF4-213ENST00000578917 TGFB2P61812 414 aa8.52□□□□□ -1.05
TRAF4-213ENST00000578917 NFIXQ14938 502 aa8.52□□□□□ -1.05
TRAF4-213ENST00000578917 KIF6Q6ZMV9 814 aa8.52□□□□□ -1.05
TRAF4-213ENST00000578917 BCS1LQ9Y276 419 aa8.52□□□□□ -1.05
TRAF4-213ENST00000578917 KCPQ6ZWJ8 1503 aa8.52□□□□□ -1.05
TRAF4-213ENST00000578917 SCN11AQ9UI33 1791 aa8.51□□□□□ -1.05
TRAF4-213ENST00000578917 FAM177BA6PVY3 158 aa8.51□□□□□ -1.05
TRAF4-213ENST00000578917 NBPF26B4DH59 902 aa8.51□□□□□ -1.05
TRAF4-213ENST00000578917 POLRMTO00411 1230 aaKnown RBP8.51□□□□□ -1.05
TRAF4-213ENST00000578917 DPEP1P16444 411 aa8.51□□□□□ -1.05
TRAF4-213ENST00000578917 GNAI1P63096 354 aa8.51□□□□□ -1.05
TRAF4-213ENST00000578917 DDR1Q08345 913 aa8.51□□□□□ -1.05
TRAF4-213ENST00000578917 TBC1D9BQ66K14 1250 aa8.51□□□□□ -1.05
TRAF4-213ENST00000578917 NBPF10Q6P3W6 841 aaKnown RBP8.51□□□□□ -1.05
TRAF4-213ENST00000578917 NBPF15Q8N660 670 aa8.51□□□□□ -1.05
TRAF4-213ENST00000578917 CFAP44Q96MT7 982 aa8.51□□□□□ -1.05
TRAF4-213ENST00000578917 H0YIN7 160 aa8.5□□□□□ -1.05
TRAF4-213ENST00000578917 ELL2O00472 640 aaPredicted RBP8.5□□□□□ -1.05
TRAF4-213ENST00000578917 CAMTA2O94983 1202 aa8.5□□□□□ -1.05
TRAF4-213ENST00000578917 AIMP1Q12904 312 aaKnown RBP8.5□□□□□ -1.05
TRAF4-213ENST00000578917 CLEC4GQ6UXB4 293 aa8.5□□□□□ -1.05
TRAF4-213ENST00000578917 TPTE2Q6XPS3 522 aa8.5□□□□□ -1.05
TRAF4-213ENST00000578917 NBPF5PQ86XG9 351 aaPredicted RBP8.5□□□□□ -1.05
TRAF4-213ENST00000578917 CHMP4AQ9BY43 222 aa8.5□□□□□ -1.05
TRAF4-213ENST00000578917 IFT57Q9NWB7 429 aa8.5□□□□□ -1.05
TRAF4-213ENST00000578917 PIM2Q9P1W9 311 aa8.5□□□□□ -1.05
TRAF4-213ENST00000578917 YBX3P16989 372 aaKnown RBP eCLIP8.49□□□□□ -1.056e-10■■□□□ 14.3
TRAF4-213ENST00000578917 CHRNA5P30532 468 aa8.49□□□□□ -1.05
TRAF4-213ENST00000578917 ST5P78524 1137 aa8.49□□□□□ -1.05
TRAF4-213ENST00000578917 DALRD3Q5D0E6 543 aaKnown RBP8.49□□□□□ -1.05
TRAF4-213ENST00000578917 HDGFL1Q5TGJ6 251 aa8.49□□□□□ -1.05
TRAF4-213ENST00000578917 ARHGAP27Q6ZUM4 889 aa8.49□□□□□ -1.05
TRAF4-213ENST00000578917 CCDC24Q8N4L8 307 aa8.49□□□□□ -1.05
TRAF4-213ENST00000578917 CNBD1Q8NA66 436 aa8.49□□□□□ -1.05
TRAF4-213ENST00000578917 ZBTB3Q9H5J0 574 aa8.49□□□□□ -1.05
TRAF4-213ENST00000578917 BCL2L12Q9HB09 334 aa8.49□□□□□ -1.05
TRAF4-213ENST00000578917 MBIPQ9NS73 344 aa8.49□□□□□ -1.05
TRAF4-213ENST00000578917 NIP7Q9Y221 180 aaKnown RBP eCLIP8.49□□□□□ -1.05
TRAF4-213ENST00000578917 PDE6BP35913 854 aa8.48□□□□□ -1.05
TRAF4-213ENST00000578917 KRT24Q2M2I5 525 aa8.48□□□□□ -1.05
TRAF4-213ENST00000578917 DUSP27Q5VZP5 1158 aa8.48□□□□□ -1.05
TRAF4-213ENST00000578917 TTLL7Q6ZT98 887 aa8.48□□□□□ -1.05
TRAF4-213ENST00000578917 C2CD5Q86YS7 1000 aa8.48□□□□□ -1.05
TRAF4-213ENST00000578917 ZNF622Q969S3 477 aaKnown RBP eCLIP8.48□□□□□ -1.05
TRAF4-213ENST00000578917 BRIP1Q9BX63 1249 aa8.48□□□□□ -1.05
TRAF4-213ENST00000578917 DBF4Q9UBU7 674 aaPredicted RBP8.48□□□□□ -1.05
TRAF4-213ENST00000578917 GOLGB1Q14789 3259 aaKnown RBP8.48□□□□□ -1.05
TRAF4-213ENST00000578917 CARMIL3Q8ND23 1372 aa8.48□□□□□ -1.05
TRAF4-213ENST00000578917 TAF1LQ8IZX4 1826 aa8.47□□□□□ -1.05
TRAF4-213ENST00000578917 ERVV-1B6SEH8 477 aa8.47□□□□□ -1.05
TRAF4-213ENST00000578917 ANXA1P04083 346 aa8.47□□□□□ -1.05
TRAF4-213ENST00000578917 GPTP24298 496 aa8.47□□□□□ -1.05
TRAF4-213ENST00000578917 HLFQ16534 295 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms