RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 STARD3NLO95772 234 aa15.63■□□□□ 0.09
IFT20-207ENST00000578547 HOXB7P09629 217 aa15.63■□□□□ 0.09
IFT20-207ENST00000578547 ZNF827Q17R98 1081 aa15.63■□□□□ 0.09
IFT20-207ENST00000578547 AKT1S1Q96B36 256 aa15.63■□□□□ 0.09
IFT20-207ENST00000578547 TEX13AQ9BXU3 409 aaPredicted RBP15.63■□□□□ 0.09
IFT20-207ENST00000578547 ANO8Q9HCE9 1232 aaPredicted RBP15.63■□□□□ 0.09
IFT20-207ENST00000578547 RREB1Q92766 1687 aa15.63■□□□□ 0.09
IFT20-207ENST00000578547 TAF1LQ8IZX4 1826 aa15.62■□□□□ 0.09
IFT20-207ENST00000578547 VAMP4O75379 141 aa15.62■□□□□ 0.09
IFT20-207ENST00000578547 CRKLP46109 303 aaKnown RBP15.62■□□□□ 0.09
IFT20-207ENST00000578547 PIP4K2AP48426 406 aaPredicted RBP15.62■□□□□ 0.09
IFT20-207ENST00000578547 SOS1Q07889 1333 aaPredicted RBP15.62■□□□□ 0.09
IFT20-207ENST00000578547 C4BP0C0L5 1744 aa15.61■□□□□ 0.09
IFT20-207ENST00000578547 NUP188Q5SRE5 1749 aa15.61■□□□□ 0.09
IFT20-207ENST00000578547 RC3H1Q5TC82 1133 aaKnown RBP15.61■□□□□ 0.09
IFT20-207ENST00000578547 NBPF14Q5TI25 921 aa15.61■□□□□ 0.09
IFT20-207ENST00000578547 INTS5Q6P9B9 1019 aaKnown RBP15.61■□□□□ 0.09
IFT20-207ENST00000578547 STK32BQ9NY57 414 aa15.61■□□□□ 0.09
IFT20-207ENST00000578547 A1BGP04217 495 aa15.6■□□□□ 0.09
IFT20-207ENST00000578547 HMGB2P26583 209 aaKnown RBP15.6■□□□□ 0.09
IFT20-207ENST00000578547 SLC15A2Q16348 729 aa15.6■□□□□ 0.09
IFT20-207ENST00000578547 CCDC30Q5VVM6 783 aa15.6■□□□□ 0.09
IFT20-207ENST00000578547 SMIM5Q71RC9 77 aa15.6■□□□□ 0.09
IFT20-207ENST00000578547 BCL2L13Q9BXK5 485 aa15.6■□□□□ 0.09
IFT20-207ENST00000578547 STK31Q9BXU1 1019 aa15.6■□□□□ 0.09
IFT20-207ENST00000578547 CCDC87Q9NVE4 849 aa15.6■□□□□ 0.09
IFT20-207ENST00000578547 CHPF2Q9P2E5 772 aa15.6■□□□□ 0.09
IFT20-207ENST00000578547 ZNF330Q9Y3S2 320 aaPredicted RBP15.6■□□□□ 0.09
IFT20-207ENST00000578547 CNTNAP4Q9C0A0 1308 aa15.6■□□□□ 0.09
IFT20-207ENST00000578547 ANXA1P04083 346 aa15.59■□□□□ 0.09
IFT20-207ENST00000578547 CT47B1P0C2W7 299 aaPredicted RBP15.59■□□□□ 0.09
IFT20-207ENST00000578547 MYL6BP14649 208 aa15.59■□□□□ 0.09
IFT20-207ENST00000578547 CANXP27824 592 aaKnown RBP15.59■□□□□ 0.09
IFT20-207ENST00000578547 AMIGO3Q86WK7 504 aa15.59■□□□□ 0.09
IFT20-207ENST00000578547 AK7Q96M32 723 aa15.59■□□□□ 0.09
IFT20-207ENST00000578547 TFCP2L1Q9NZI6 479 aa15.59■□□□□ 0.09
IFT20-207ENST00000578547 ZBTB1Q9Y2K1 713 aa15.59■□□□□ 0.09
IFT20-207ENST00000578547 GNPATO15228 680 aa15.58■□□□□ 0.08
IFT20-207ENST00000578547 PROSER3Q2NL68 480 aa15.58■□□□□ 0.08
IFT20-207ENST00000578547 CHMP4AQ9BY43 222 aa15.58■□□□□ 0.08
IFT20-207ENST00000578547 SMC4Q9NTJ3 1288 aa15.58■□□□□ 0.08
IFT20-207ENST00000578547 NBPF26B4DH59 902 aa15.57■□□□□ 0.08
IFT20-207ENST00000578547 RPS6KA4O75676 772 aa15.57■□□□□ 0.08
IFT20-207ENST00000578547 NBPF10Q6P3W6 841 aaKnown RBP15.57■□□□□ 0.08
IFT20-207ENST00000578547 NBPF15Q8N660 670 aa15.57■□□□□ 0.08
IFT20-207ENST00000578547 SSH1Q8WYL5 1049 aa15.57■□□□□ 0.08
IFT20-207ENST00000578547 DBF4Q9UBU7 674 aaPredicted RBP15.57■□□□□ 0.08
IFT20-207ENST00000578547 MYH14Q7Z406 1995 aaKnown RBP15.56■□□□□ 0.08
IFT20-207ENST00000578547 SLC4A2P04920 1241 aa15.56■□□□□ 0.08
IFT20-207ENST00000578547 RARSP54136 660 aaKnown RBP15.56■□□□□ 0.08
IFT20-207ENST00000578547 R3HDM1Q15032 1099 aaKnown RBP15.56■□□□□ 0.08
IFT20-207ENST00000578547 PDIA6Q15084 440 aa15.56■□□□□ 0.08
IFT20-207ENST00000578547 ZNF428Q96B54 188 aa15.56■□□□□ 0.08
IFT20-207ENST00000578547 DDX21Q9NR30 783 aaKnown RBP eCLIP15.56■□□□□ 0.08
IFT20-207ENST00000578547 RCAN3Q9UKA8 241 aa15.56■□□□□ 0.08
IFT20-207ENST00000578547 ERBB4Q15303 1308 aa15.56■□□□□ 0.08
IFT20-207ENST00000578547 PSDA5PKW4 1024 aaPredicted RBP15.55■□□□□ 0.08
IFT20-207ENST00000578547 PHF14O94880 888 aa15.55■□□□□ 0.08
IFT20-207ENST00000578547 ARXQ96QS3 562 aa15.55■□□□□ 0.08
IFT20-207ENST00000578547 RTCBQ9Y3I0 505 aaKnown RBP15.55■□□□□ 0.08
IFT20-207ENST00000578547 PNPLA7Q6ZV29 1317 aa15.54■□□□□ 0.08
IFT20-207ENST00000578547 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.54■□□□□ 0.08
IFT20-207ENST00000578547 BCAR3O75815 825 aa15.54■□□□□ 0.08
IFT20-207ENST00000578547 CENPBP07199 599 aaPredicted RBP15.54■□□□□ 0.08
IFT20-207ENST00000578547 EIF5P55010 431 aaKnown RBP15.54■□□□□ 0.08
IFT20-207ENST00000578547 ALDH1L2Q3SY69 923 aa15.54■□□□□ 0.08
IFT20-207ENST00000578547 NPM2Q86SE8 214 aaKnown RBP15.54■□□□□ 0.08
IFT20-207ENST00000578547 COL15A1P39059 1388 aa15.53■□□□□ 0.08
IFT20-207ENST00000578547 SSFA2P28290 1259 aa15.53■□□□□ 0.08
IFT20-207ENST00000578547 IL6STP40189 918 aaPredicted RBP15.53■□□□□ 0.08
IFT20-207ENST00000578547 AIMP1Q12904 312 aaKnown RBP15.53■□□□□ 0.08
IFT20-207ENST00000578547 TRAPPC3LQ5T215 181 aa15.53■□□□□ 0.08
IFT20-207ENST00000578547 G2E3Q7L622 706 aa15.53■□□□□ 0.08
IFT20-207ENST00000578547 COL23A1Q86Y22 540 aaPredicted RBP15.53■□□□□ 0.08
IFT20-207ENST00000578547 MRPL50Q8N5N7 158 aaKnown RBP15.53■□□□□ 0.08
IFT20-207ENST00000578547 ARHGEF1Q92888 912 aaKnown RBP15.53■□□□□ 0.08
IFT20-207ENST00000578547 PDGFDQ9GZP0 370 aaPredicted RBP15.53■□□□□ 0.08
IFT20-207ENST00000578547 PHAXQ9H814 394 aaKnown RBP15.53■□□□□ 0.08
IFT20-207ENST00000578547 HYPKQ9NX55 129 aa15.53■□□□□ 0.08
IFT20-207ENST00000578547 UBR3Q6ZT12 1888 aa15.52■□□□□ 0.08
IFT20-207ENST00000578547 TUBGCP6Q96RT7 1819 aa15.52■□□□□ 0.08
IFT20-207ENST00000578547 XAGE3Q8WTP9 111 aa15.52■□□□□ 0.08
IFT20-207ENST00000578547 MSH5O43196 834 aa15.51■□□□□ 0.07
IFT20-207ENST00000578547 ADRA2BP18089 450 aa15.51■□□□□ 0.07
IFT20-207ENST00000578547 LRP10Q7Z4F1 713 aa15.51■□□□□ 0.07
IFT20-207ENST00000578547 FLAD1Q8NFF5 587 aa15.51■□□□□ 0.07
IFT20-207ENST00000578547 FRAT1Q92837 279 aaPredicted RBP15.51■□□□□ 0.07
IFT20-207ENST00000578547 FLIIQ13045 1269 aa15.5■□□□□ 0.07
IFT20-207ENST00000578547 FKBP5Q13451 457 aaPredicted RBP15.5■□□□□ 0.07
IFT20-207ENST00000578547 KIF6Q6ZMV9 814 aa15.5■□□□□ 0.07
IFT20-207ENST00000578547 TTLL7Q6ZT98 887 aa15.5■□□□□ 0.07
IFT20-207ENST00000578547 COPS6Q7L5N1 327 aa15.5■□□□□ 0.07
IFT20-207ENST00000578547 C4AP0C0L4 1744 aa15.5■□□□□ 0.07
IFT20-207ENST00000578547 KIF16BQ96L93 1317 aa15.49■□□□□ 0.07
IFT20-207ENST00000578547 RFC4P35249 363 aa15.49■□□□□ 0.07
IFT20-207ENST00000578547 DZIP3Q86Y13 1208 aaKnown RBP15.49■□□□□ 0.07
IFT20-207ENST00000578547 ZBTB3Q9H5J0 574 aa15.49■□□□□ 0.07
IFT20-207ENST00000578547 SRP68Q9UHB9 627 aaKnown RBP15.49■□□□□ 0.07
IFT20-207ENST00000578547 NOB1Q9ULX3 412 aaKnown RBP15.49■□□□□ 0.07
IFT20-207ENST00000578547 TBC1D2BQ9UPU7 963 aa15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms