RNA–Protein interactions for RNA: ENST00000578367.1

LINC01543-201, Transcript of long intergenic non-protein coding RNA 1543, humanhuman

TSL 5 BASIC

Gene LINC01543, Length 900 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01543-201ENST00000578367 USP16Q9Y5T5 823 aa17.88■□□□□ 0.45
LINC01543-201ENST00000578367 VAMP4O75379 141 aa17.87■□□□□ 0.45
LINC01543-201ENST00000578367 ADRA2BP18089 450 aa17.87■□□□□ 0.45
LINC01543-201ENST00000578367 CRKLP46109 303 aaKnown RBP17.87■□□□□ 0.45
LINC01543-201ENST00000578367 AKT1S1Q96B36 256 aa17.87■□□□□ 0.45
LINC01543-201ENST00000578367 C5P01031 1676 aa17.87■□□□□ 0.45
LINC01543-201ENST00000578367 RPS6KA4O75676 772 aa17.86■□□□□ 0.45
LINC01543-201ENST00000578367 IL6STP40189 918 aaPredicted RBP17.86■□□□□ 0.45
LINC01543-201ENST00000578367 HDGFL1Q5TGJ6 251 aa17.86■□□□□ 0.45
LINC01543-201ENST00000578367 AK7Q96M32 723 aa17.86■□□□□ 0.45
LINC01543-201ENST00000578367 STK32BQ9NY57 414 aa17.86■□□□□ 0.45
LINC01543-201ENST00000578367 DBF4Q9UBU7 674 aaPredicted RBP17.86■□□□□ 0.45
LINC01543-201ENST00000578367 SSFA2P28290 1259 aa17.85■□□□□ 0.45
LINC01543-201ENST00000578367 KRT24Q2M2I5 525 aa17.85■□□□□ 0.45
LINC01543-201ENST00000578367 INTS5Q6P9B9 1019 aaKnown RBP17.85■□□□□ 0.45
LINC01543-201ENST00000578367 TSPYL6Q8N831 410 aa17.85■□□□□ 0.45
LINC01543-201ENST00000578367 YTHDC1Q96MU7 727 aaKnown RBP17.85■□□□□ 0.45
LINC01543-201ENST00000578367 DDX21Q9NR30 783 aaKnown RBP eCLIP17.85■□□□□ 0.45
LINC01543-201ENST00000578367 RGL2O15211 777 aa17.84■□□□□ 0.45
LINC01543-201ENST00000578367 SLC15A2Q16348 729 aa17.84■□□□□ 0.45
LINC01543-201ENST00000578367 RTCBQ9Y3I0 505 aaKnown RBP17.84■□□□□ 0.45
LINC01543-201ENST00000578367 RREB1Q92766 1687 aa17.83■□□□□ 0.45
LINC01543-201ENST00000578367 A0A087WZG4 1122 aa17.83■□□□□ 0.44
LINC01543-201ENST00000578367 PRAMEF22A3QJZ6 481 aa17.83■□□□□ 0.44
LINC01543-201ENST00000578367 ELL2O00472 640 aaPredicted RBP17.83■□□□□ 0.44
LINC01543-201ENST00000578367 ALDH1L2Q3SY69 923 aa17.83■□□□□ 0.44
LINC01543-201ENST00000578367 NPM2Q86SE8 214 aaKnown RBP17.83■□□□□ 0.44
LINC01543-201ENST00000578367 STK31Q9BXU1 1019 aa17.83■□□□□ 0.44
LINC01543-201ENST00000578367 HYPKQ9NX55 129 aa17.83■□□□□ 0.44
LINC01543-201ENST00000578367 EIF2S2P20042 333 aaKnown RBP17.82■□□□□ 0.44
LINC01543-201ENST00000578367 EIF5P55010 431 aaKnown RBP17.82■□□□□ 0.44
LINC01543-201ENST00000578367 KCNQ4P56696 695 aa17.82■□□□□ 0.44
LINC01543-201ENST00000578367 TFCP2L1Q9NZI6 479 aa17.82■□□□□ 0.44
LINC01543-201ENST00000578367 ZBTB1Q9Y2K1 713 aa17.82■□□□□ 0.44
LINC01543-201ENST00000578367 TJP1Q07157 1748 aa17.81■□□□□ 0.44
LINC01543-201ENST00000578367 GNPATO15228 680 aa17.81■□□□□ 0.44
LINC01543-201ENST00000578367 A1BGP04217 495 aa17.81■□□□□ 0.44
LINC01543-201ENST00000578367 BRPF1P55201 1214 aaPredicted RBP17.8■□□□□ 0.44
LINC01543-201ENST00000578367 PDIA6Q15084 440 aa17.8■□□□□ 0.44
LINC01543-201ENST00000578367 TRAPPC3LQ5T215 181 aa17.8■□□□□ 0.44
LINC01543-201ENST00000578367 C4BP0C0L5 1744 aa17.8■□□□□ 0.44
LINC01543-201ENST00000578367 COL5A3P25940 1745 aaPredicted RBP17.79■□□□□ 0.44
LINC01543-201ENST00000578367 NBPF26B4DH59 902 aa17.79■□□□□ 0.44
LINC01543-201ENST00000578367 CANXP27824 592 aaKnown RBP17.79■□□□□ 0.44
LINC01543-201ENST00000578367 ZNF827Q17R98 1081 aa17.79■□□□□ 0.44
LINC01543-201ENST00000578367 NBPF10Q6P3W6 841 aaKnown RBP17.79■□□□□ 0.44
LINC01543-201ENST00000578367 NBPF15Q8N660 670 aa17.79■□□□□ 0.44
LINC01543-201ENST00000578367 ANO8Q9HCE9 1232 aaPredicted RBP17.79■□□□□ 0.44
LINC01543-201ENST00000578367 LRP10Q7Z4F1 713 aa17.78■□□□□ 0.44
LINC01543-201ENST00000578367 CHPF2Q9P2E5 772 aa17.78■□□□□ 0.44
LINC01543-201ENST00000578367 LAMB4A4D0S4 1761 aa17.78■□□□□ 0.44
LINC01543-201ENST00000578367 SLC16A10Q8TF71 515 aa17.77■□□□□ 0.44
LINC01543-201ENST00000578367 NUP188Q5SRE5 1749 aa17.77■□□□□ 0.44
LINC01543-201ENST00000578367 COL15A1P39059 1388 aa17.77■□□□□ 0.43
LINC01543-201ENST00000578367 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.76■□□□□ 0.43
LINC01543-201ENST00000578367 ERVV-1B6SEH8 477 aa17.76■□□□□ 0.43
LINC01543-201ENST00000578367 SLC4A2P04920 1241 aa17.76■□□□□ 0.43
LINC01543-201ENST00000578367 RARSP54136 660 aaKnown RBP17.76■□□□□ 0.43
LINC01543-201ENST00000578367 TAF1LQ8IZX4 1826 aa17.76■□□□□ 0.43
LINC01543-201ENST00000578367 DDX58O95786 925 aaKnown RBP17.75■□□□□ 0.43
LINC01543-201ENST00000578367 RFC4P35249 363 aa17.75■□□□□ 0.43
LINC01543-201ENST00000578367 CLEC4GQ6UXB4 293 aa17.75■□□□□ 0.43
LINC01543-201ENST00000578367 ARHGEF1Q92888 912 aaKnown RBP17.75■□□□□ 0.43
LINC01543-201ENST00000578367 PNPLA7Q6ZV29 1317 aa17.74■□□□□ 0.43
LINC01543-201ENST00000578367 MYL6BP14649 208 aa17.74■□□□□ 0.43
LINC01543-201ENST00000578367 SSH1Q8WYL5 1049 aa17.74■□□□□ 0.43
LINC01543-201ENST00000578367 NECTIN2Q92692 538 aa17.74■□□□□ 0.43
LINC01543-201ENST00000578367 NARFQ9UHQ1 456 aa17.74■□□□□ 0.43
LINC01543-201ENST00000578367 ZPR1O75312 459 aa17.73■□□□□ 0.43
LINC01543-201ENST00000578367 PROSER3Q2NL68 480 aa17.73■□□□□ 0.43
LINC01543-201ENST00000578367 KIF6Q6ZMV9 814 aa17.73■□□□□ 0.43
LINC01543-201ENST00000578367 DZIP3Q86Y13 1208 aaKnown RBP17.73■□□□□ 0.43
LINC01543-201ENST00000578367 MRPL50Q8N5N7 158 aaKnown RBP17.73■□□□□ 0.43
LINC01543-201ENST00000578367 ZNF652Q9Y2D9 606 aa17.73■□□□□ 0.43
LINC01543-201ENST00000578367 PTPRCP08575 1304 aa17.72■□□□□ 0.43
LINC01543-201ENST00000578367 KIF16BQ96L93 1317 aa17.72■□□□□ 0.43
LINC01543-201ENST00000578367 FLIIQ13045 1269 aa17.72■□□□□ 0.43
LINC01543-201ENST00000578367 COPS6Q7L5N1 327 aa17.72■□□□□ 0.43
LINC01543-201ENST00000578367 XAGE3Q8WTP9 111 aa17.72■□□□□ 0.43
LINC01543-201ENST00000578367 ARHGAP45Q92619 1136 aa17.72■□□□□ 0.43
LINC01543-201ENST00000578367 SMC4Q9NTJ3 1288 aa17.72■□□□□ 0.43
LINC01543-201ENST00000578367 MAP3K15Q6ZN16 1313 aa17.72■□□□□ 0.43
LINC01543-201ENST00000578367 USP42Q9H9J4 1324 aaKnown RBP17.72■□□□□ 0.43
LINC01543-201ENST00000578367 IPO8O15397 1037 aaKnown RBP17.71■□□□□ 0.43
LINC01543-201ENST00000578367 ANKRD13DQ6ZTN6 518 aa17.71■□□□□ 0.43
LINC01543-201ENST00000578367 COL23A1Q86Y22 540 aaPredicted RBP17.71■□□□□ 0.43
LINC01543-201ENST00000578367 NLGN1Q8N2Q7 840 aa17.71■□□□□ 0.43
LINC01543-201ENST00000578367 PLBD2Q8NHP8 589 aa17.71■□□□□ 0.43
LINC01543-201ENST00000578367 MYH14Q7Z406 1995 aaKnown RBP17.7■□□□□ 0.42
LINC01543-201ENST00000578367 PHF14O94880 888 aa17.7■□□□□ 0.42
LINC01543-201ENST00000578367 CAMTA2O94983 1202 aa17.7■□□□□ 0.42
LINC01543-201ENST00000578367 HSP90AB3PQ58FF7 597 aa17.7■□□□□ 0.42
LINC01543-201ENST00000578367 RCAN3Q9UKA8 241 aa17.7■□□□□ 0.42
LINC01543-201ENST00000578367 ZNF330Q9Y3S2 320 aaPredicted RBP17.7■□□□□ 0.42
LINC01543-201ENST00000578367 QSER1Q2KHR3 1735 aa17.69■□□□□ 0.42
LINC01543-201ENST00000578367 ANXA1P04083 346 aa17.69■□□□□ 0.42
LINC01543-201ENST00000578367 PIP4K2AP48426 406 aaPredicted RBP17.69■□□□□ 0.42
LINC01543-201ENST00000578367 R3HDM1Q15032 1099 aaKnown RBP17.69■□□□□ 0.42
LINC01543-201ENST00000578367 KSR2Q6VAB6 950 aa17.69■□□□□ 0.42
LINC01543-201ENST00000578367 GIGYF2Q6Y7W6 1299 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms