RNA–Protein interactions for RNA: ENST00000578299.1

PTP4A1-204, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 2 BASIC

Gene PTP4A1, Length 135 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-204ENST00000578299 CXXC1Q9P0U4 656 aaPredicted RBP4.17□□□□□ -1.74
PTP4A1-204ENST00000578299 USP3Q9Y6I4 520 aa4.17□□□□□ -1.74
PTP4A1-204ENST00000578299 SERTM1A2A2V5 107 aa4.16□□□□□ -1.74
PTP4A1-204ENST00000578299 CARNS1A5YM72 827 aa4.16□□□□□ -1.74
PTP4A1-204ENST00000578299 SOBPA7XYQ1 873 aa4.16□□□□□ -1.74
PTP4A1-204ENST00000578299 LGR5O75473 907 aa4.16□□□□□ -1.74
PTP4A1-204ENST00000578299 RHOQP17081 205 aa4.16□□□□□ -1.74
PTP4A1-204ENST00000578299 SSFA2P28290 1259 aa4.16□□□□□ -1.74
PTP4A1-204ENST00000578299 NOS2P35228 1153 aa4.16□□□□□ -1.74
PTP4A1-204ENST00000578299 PLA2G4AP47712 749 aa4.16□□□□□ -1.74
PTP4A1-204ENST00000578299 HIRAP54198 1017 aaPredicted RBP4.16□□□□□ -1.74
PTP4A1-204ENST00000578299 POTEAQ6S8J7 498 aa4.16□□□□□ -1.74
PTP4A1-204ENST00000578299 C1orf216Q8TAB5 229 aa4.16□□□□□ -1.74
PTP4A1-204ENST00000578299 L3MBTL2Q969R5 705 aa4.16□□□□□ -1.74
PTP4A1-204ENST00000578299 C2orf49Q9BVC5 232 aaPredicted RBP4.16□□□□□ -1.74
PTP4A1-204ENST00000578299 SLAIN2Q9P270 581 aa4.16□□□□□ -1.74
PTP4A1-204ENST00000578299 ZNF232Q9UNY5 417 aa4.16□□□□□ -1.74
PTP4A1-204ENST00000578299 A0A1B0GTH6 734 aa4.15□□□□□ -1.75
PTP4A1-204ENST00000578299 POTECB2RU33 542 aa4.15□□□□□ -1.75
PTP4A1-204ENST00000578299 EML1O00423 815 aa4.15□□□□□ -1.75
PTP4A1-204ENST00000578299 PTCD1O75127 700 aaKnown RBP4.15□□□□□ -1.75
PTP4A1-204ENST00000578299 BRD1O95696 1058 aa4.15□□□□□ -1.75
PTP4A1-204ENST00000578299 PHKA2P46019 1235 aa4.15□□□□□ -1.75
PTP4A1-204ENST00000578299 PTSQ03393 145 aa4.15□□□□□ -1.75
PTP4A1-204ENST00000578299 NBPF1Q3BBV0 1214 aa4.15□□□□□ -1.75
PTP4A1-204ENST00000578299 ZDHHC1Q8WTX9 485 aa4.15□□□□□ -1.75
PTP4A1-204ENST00000578299 CHMP7Q8WUX9 453 aaPredicted RBP4.15□□□□□ -1.75
PTP4A1-204ENST00000578299 COL26A1Q96A83 441 aa4.15□□□□□ -1.75
PTP4A1-204ENST00000578299 VTI1AQ96AJ9 217 aa4.15□□□□□ -1.75
PTP4A1-204ENST00000578299 TIMMDC1Q9NPL8 285 aa4.15□□□□□ -1.75
PTP4A1-204ENST00000578299 UTP3Q9NQZ2 479 aaKnown RBP eCLIP4.15□□□□□ -1.75
PTP4A1-204ENST00000578299 ZDHHC3Q9NYG2 299 aa4.15□□□□□ -1.75
PTP4A1-204ENST00000578299 DYRK1BQ9Y463 629 aa4.15□□□□□ -1.75
PTP4A1-204ENST00000578299 TATP17735 454 aaPredicted RBP4.14□□□□□ -1.75
PTP4A1-204ENST00000578299 FKBP5Q13451 457 aaPredicted RBP4.14□□□□□ -1.75
PTP4A1-204ENST00000578299 C1orf53Q5VUE5 145 aa4.14□□□□□ -1.75
PTP4A1-204ENST00000578299 ZNF787Q6DD87 383 aa4.14□□□□□ -1.75
PTP4A1-204ENST00000578299 AIDAQ96BJ3 306 aa4.14□□□□□ -1.75
PTP4A1-204ENST00000578299 MTMR7Q9Y216 660 aa4.14□□□□□ -1.75
PTP4A1-204ENST00000578299 PARP3Q9Y6F1 533 aa4.14□□□□□ -1.75
PTP4A1-204ENST00000578299 SENP3-EIF4A1A0A087X0R7 540 aa4.13□□□□□ -1.75
PTP4A1-204ENST00000578299 SLC35F4A4IF30 521 aa4.13□□□□□ -1.75
PTP4A1-204ENST00000578299 PATL2C9JE40 543 aaKnown RBP4.13□□□□□ -1.75
PTP4A1-204ENST00000578299 F11P03951 625 aa4.13□□□□□ -1.75
PTP4A1-204ENST00000578299 MSX1P28360 303 aa4.13□□□□□ -1.75
PTP4A1-204ENST00000578299 TXLNAP40222 546 aa4.13□□□□□ -1.75
PTP4A1-204ENST00000578299 PHLDB3Q6NSJ2 640 aa4.13□□□□□ -1.75
PTP4A1-204ENST00000578299 CCDC155Q8N6L0 562 aa4.13□□□□□ -1.75
PTP4A1-204ENST00000578299 PHACTR1Q9C0D0 580 aa4.13□□□□□ -1.75
PTP4A1-204ENST00000578299 GPC6Q9Y625 555 aaPredicted RBP4.13□□□□□ -1.75
PTP4A1-204ENST00000578299 ARID4AP29374 1257 aaPredicted RBP4.12□□□□□ -1.75
PTP4A1-204ENST00000578299 KCNA1Q09470 495 aa4.12□□□□□ -1.75
PTP4A1-204ENST00000578299 LBRQ14739 615 aaKnown RBP4.12□□□□□ -1.75
PTP4A1-204ENST00000578299 RTN1Q16799 776 aa4.12□□□□□ -1.75
PTP4A1-204ENST00000578299 SH3PXD2AQ5TCZ1 1133 aa4.12□□□□□ -1.75
PTP4A1-204ENST00000578299 ALDH16A1Q8IZ83 802 aa4.12□□□□□ -1.75
PTP4A1-204ENST00000578299 PGBD3Q8N328 593 aa4.12□□□□□ -1.75
PTP4A1-204ENST00000578299 KCTD17Q8N5Z5 321 aa4.12□□□□□ -1.75
PTP4A1-204ENST00000578299 NGLY1Q96IV0 654 aa4.12□□□□□ -1.75
PTP4A1-204ENST00000578299 GAS2L1Q99501 681 aaPredicted RBP4.12□□□□□ -1.75
PTP4A1-204ENST00000578299 MKNK1Q9BUB5 465 aa4.12□□□□□ -1.75
PTP4A1-204ENST00000578299 HCN4Q9Y3Q4 1203 aa4.12□□□□□ -1.75
PTP4A1-204ENST00000578299 H7C1W4 665 aa4.11□□□□□ -1.75
PTP4A1-204ENST00000578299 PPFIA3O75145 1194 aa4.11□□□□□ -1.75
PTP4A1-204ENST00000578299 ATP4AP20648 1035 aa4.11□□□□□ -1.75
PTP4A1-204ENST00000578299 HIF1AQ16665 826 aa4.11□□□□□ -1.75
PTP4A1-204ENST00000578299 ARSJQ5FYB0 599 aaPredicted RBP4.11□□□□□ -1.75
PTP4A1-204ENST00000578299 RIPOR1Q6ZS17 1223 aa4.11□□□□□ -1.75
PTP4A1-204ENST00000578299 CCER1Q8TC90 406 aaPredicted RBP4.11□□□□□ -1.75
PTP4A1-204ENST00000578299 RHPN1Q8TCX5 695 aa4.11□□□□□ -1.75
PTP4A1-204ENST00000578299 MYO19Q96H55 970 aa4.11□□□□□ -1.75
PTP4A1-204ENST00000578299 GMCL1Q96IK5 515 aa4.11□□□□□ -1.75
PTP4A1-204ENST00000578299 CRISPLD1Q9H336 500 aa4.11□□□□□ -1.75
PTP4A1-204ENST00000578299 QTRT2Q9H974 415 aaKnown RBP4.11□□□□□ -1.75
PTP4A1-204ENST00000578299 GPAMQ9HCL2 828 aa4.11□□□□□ -1.75
PTP4A1-204ENST00000578299 A0A1W2PNR3 127 aa4.1□□□□□ -1.75
PTP4A1-204ENST00000578299 ITGA6P23229 1130 aa4.1□□□□□ -1.75
PTP4A1-204ENST00000578299 SCNN1AP37088 669 aa4.1□□□□□ -1.75
PTP4A1-204ENST00000578299 NAA30Q147X3 362 aaPredicted RBP4.1□□□□□ -1.75
PTP4A1-204ENST00000578299 EFHC2Q5JST6 749 aa4.1□□□□□ -1.75
PTP4A1-204ENST00000578299 COX20Q5RI15 118 aa4.1□□□□□ -1.75
PTP4A1-204ENST00000578299 C16orf46Q6P387 395 aa4.1□□□□□ -1.75
PTP4A1-204ENST00000578299 BICDL1Q6ZP65 573 aa4.1□□□□□ -1.75
PTP4A1-204ENST00000578299 TXNDC2Q86VQ3 553 aa4.1□□□□□ -1.75
PTP4A1-204ENST00000578299 NLRP8Q86W28 1048 aa4.1□□□□□ -1.75
PTP4A1-204ENST00000578299 NPAS3Q8IXF0 933 aa4.1□□□□□ -1.75
PTP4A1-204ENST00000578299 TRIM22Q8IYM9 498 aa4.1□□□□□ -1.75
PTP4A1-204ENST00000578299 C7orf43Q8WVR3 580 aa4.1□□□□□ -1.75
PTP4A1-204ENST00000578299 ZIC5Q96T25 663 aa4.1□□□□□ -1.75
PTP4A1-204ENST00000578299 RUBCNLQ9H714 662 aa4.1□□□□□ -1.75
PTP4A1-204ENST00000578299 NEUROD4Q9HD90 331 aa4.1□□□□□ -1.75
PTP4A1-204ENST00000578299 ANKIB1Q9P2G1 1089 aa4.1□□□□□ -1.75
PTP4A1-204ENST00000578299 NXF1Q9UBU9 619 aaKnown RBP4.1□□□□□ -1.75
PTP4A1-204ENST00000578299 GNEQ9Y223 722 aaKnown RBP4.1□□□□□ -1.75
PTP4A1-204ENST00000578299 C11orf91Q3C1V1 193 aa4.09□□□□□ -1.75
PTP4A1-204ENST00000578299 FIGNL1Q6PIW4 674 aa4.09□□□□□ -1.75
PTP4A1-204ENST00000578299 CAPN12Q6ZSI9 719 aa4.09□□□□□ -1.75
PTP4A1-204ENST00000578299 AEBP1Q8IUX7 1158 aa4.09□□□□□ -1.75
PTP4A1-204ENST00000578299 HELQQ8TDG4 1101 aa4.09□□□□□ -1.75
PTP4A1-204ENST00000578299 GTF3C2Q8WUA4 911 aaPredicted RBP4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms