RNA–Protein interactions for RNA: ENST00000577990.1

SMARCD2-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 449 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-206ENST00000577990 CYP19A1P11511 503 aaPredicted RBP29.19■■■□□ 2.26
SMARCD2-206ENST00000577990 ADRA2BP18089 450 aa29.18■■■□□ 2.26
SMARCD2-206ENST00000577990 NEUROD2Q15784 382 aa29.18■■■□□ 2.26
SMARCD2-206ENST00000577990 PNISRQ8TF01 805 aaKnown RBP29.18■■■□□ 2.26
SMARCD2-206ENST00000577990 TRAPPC3LQ5T215 181 aa29.17■■■□□ 2.26
SMARCD2-206ENST00000577990 INTS5Q6P9B9 1019 aaKnown RBP29.17■■■□□ 2.26
SMARCD2-206ENST00000577990 PELP1Q8IZL8 1130 aaKnown RBP29.17■■■□□ 2.26
SMARCD2-206ENST00000577990 CCDC87Q9NVE4 849 aa29.17■■■□□ 2.26
SMARCD2-206ENST00000577990 KDM3BQ7LBC6 1761 aa29.16■■■□□ 2.26
SMARCD2-206ENST00000577990 GPR162Q16538 588 aa29.16■■■□□ 2.26
SMARCD2-206ENST00000577990 STARD3NLO95772 234 aa29.15■■■□□ 2.26
SMARCD2-206ENST00000577990 TEX13AQ9BXU3 409 aaPredicted RBP29.15■■■□□ 2.26
SMARCD2-206ENST00000577990 MIS18AQ9NYP9 233 aa29.15■■■□□ 2.26
SMARCD2-206ENST00000577990 ARHGEF1Q92888 912 aaKnown RBP29.13■■■□□ 2.25
SMARCD2-206ENST00000577990 C4AP0C0L4 1744 aa29.12■■■□□ 2.25
SMARCD2-206ENST00000577990 APAF1O14727 1248 aa29.12■■■□□ 2.25
SMARCD2-206ENST00000577990 TRIM35Q9UPQ4 493 aa29.12■■■□□ 2.25
SMARCD2-206ENST00000577990 ZBTB1Q9Y2K1 713 aa29.12■■■□□ 2.25
SMARCD2-206ENST00000577990 SOS1Q07889 1333 aaPredicted RBP29.11■■■□□ 2.25
SMARCD2-206ENST00000577990 SNRPA1P09661 255 aaKnown RBP29.1■■■□□ 2.25
SMARCD2-206ENST00000577990 RFC4P35249 363 aa29.1■■■□□ 2.25
SMARCD2-206ENST00000577990 TSPYL4Q9UJ04 414 aa29.08■■■□□ 2.25
SMARCD2-206ENST00000577990 BABAM1Q9NWV8 329 aa29.07■■■□□ 2.24
SMARCD2-206ENST00000577990 PRAMEF22A3QJZ6 481 aa29.06■■■□□ 2.24
SMARCD2-206ENST00000577990 CANXP27824 592 aaKnown RBP29.06■■■□□ 2.24
SMARCD2-206ENST00000577990 COL15A1P39059 1388 aa29.05■■■□□ 2.24
SMARCD2-206ENST00000577990 YBX3P16989 372 aaKnown RBP eCLIP29.05■■■□□ 2.24
SMARCD2-206ENST00000577990 EIF4A1P60842 406 aaKnown RBP29.05■■■□□ 2.24
SMARCD2-206ENST00000577990 CD2APQ9Y5K6 639 aa29.05■■■□□ 2.24
SMARCD2-206ENST00000577990 USP16Q9Y5T5 823 aa29.05■■■□□ 2.24
SMARCD2-206ENST00000577990 LAMB4A4D0S4 1761 aa29.03■■■□□ 2.24
SMARCD2-206ENST00000577990 USP42Q9H9J4 1324 aaKnown RBP29.03■■■□□ 2.24
SMARCD2-206ENST00000577990 A1BGP04217 495 aa29.03■■■□□ 2.24
SMARCD2-206ENST00000577990 GYS1P13807 737 aa29.02■■■□□ 2.24
SMARCD2-206ENST00000577990 EIF5P55010 431 aaKnown RBP29.02■■■□□ 2.24
SMARCD2-206ENST00000577990 NLGN1Q8N2Q7 840 aa29.02■■■□□ 2.24
SMARCD2-206ENST00000577990 SRP68Q9UHB9 627 aaKnown RBP29.02■■■□□ 2.24
SMARCD2-206ENST00000577990 MMP10P09238 476 aa29.01■■■□□ 2.23
SMARCD2-206ENST00000577990 GIGYF1O75420 1035 aaPredicted RBP29■■■□□ 2.23
SMARCD2-206ENST00000577990 IL6STP40189 918 aaPredicted RBP29■■■□□ 2.23
SMARCD2-206ENST00000577990 ZNF784Q8NCA9 323 aaPredicted RBP29■■■□□ 2.23
SMARCD2-206ENST00000577990 CHL1O00533 1208 aa28.99■■■□□ 2.23
SMARCD2-206ENST00000577990 ZPR1O75312 459 aa28.99■■■□□ 2.23
SMARCD2-206ENST00000577990 WWC3Q9ULE0 1092 aa28.99■■■□□ 2.23
SMARCD2-206ENST00000577990 LAS1LQ9Y4W2 734 aaKnown RBP28.99■■■□□ 2.23
SMARCD2-206ENST00000577990 A0A087WZG4 1122 aa28.98■■■□□ 2.23
SMARCD2-206ENST00000577990 FAM9BQ8IZU0 186 aa28.98■■■□□ 2.23
SMARCD2-206ENST00000577990 NARFQ9UHQ1 456 aa28.98■■■□□ 2.23
SMARCD2-206ENST00000577990 KIF13BQ9NQT8 1826 aa28.98■■■□□ 2.23
SMARCD2-206ENST00000577990 USPL1Q5W0Q7 1092 aa28.97■■■□□ 2.23
SMARCD2-206ENST00000577990 ZNF330Q9Y3S2 320 aaPredicted RBP28.97■■■□□ 2.23
SMARCD2-206ENST00000577990 N4BP2Q86UW6 1770 aaPredicted RBP28.96■■■□□ 2.23
SMARCD2-206ENST00000577990 CALD1Q05682 793 aaKnown RBP28.96■■■□□ 2.23
SMARCD2-206ENST00000577990 KIAA1551Q9HCM1 1747 aa28.96■■■□□ 2.23
SMARCD2-206ENST00000577990 PIP4K2AP48426 406 aaPredicted RBP28.95■■■□□ 2.22
SMARCD2-206ENST00000577990 FKBP8Q14318 412 aa28.95■■■□□ 2.22
SMARCD2-206ENST00000577990 NPM2Q86SE8 214 aaKnown RBP28.95■■■□□ 2.22
SMARCD2-206ENST00000577990 CFAP44Q96MT7 982 aa28.95■■■□□ 2.22
SMARCD2-206ENST00000577990 SENP3-EIF4A1A0A087X0R7 540 aa28.93■■■□□ 2.22
SMARCD2-206ENST00000577990 CCDC27Q2M243 656 aa28.93■■■□□ 2.22
SMARCD2-206ENST00000577990 NBPF26B4DH59 902 aa28.92■■■□□ 2.22
SMARCD2-206ENST00000577990 GRIN3BO60391 1043 aa28.92■■■□□ 2.22
SMARCD2-206ENST00000577990 NCBP3Q53F19 620 aaKnown RBP28.92■■■□□ 2.22
SMARCD2-206ENST00000577990 NBPF10Q6P3W6 841 aaKnown RBP28.92■■■□□ 2.22
SMARCD2-206ENST00000577990 NBPF15Q8N660 670 aa28.92■■■□□ 2.22
SMARCD2-206ENST00000577990 IFT57Q9NWB7 429 aa28.92■■■□□ 2.22
SMARCD2-206ENST00000577990 SCN7AQ01118 1682 aa28.92■■■□□ 2.22
SMARCD2-206ENST00000577990 ZNF853P0CG23 659 aa28.91■■■□□ 2.22
SMARCD2-206ENST00000577990 GNAI1P63096 354 aa28.9■■■□□ 2.22
SMARCD2-206ENST00000577990 BCL2L12Q9HB09 334 aa28.9■■■□□ 2.22
SMARCD2-206ENST00000577990 TBC1D2BQ9UPU7 963 aa28.9■■■□□ 2.22
SMARCD2-206ENST00000577990 PARP3Q9Y6F1 533 aa28.9■■■□□ 2.22
SMARCD2-206ENST00000577990 CCER2I3L3R5 266 aa28.89■■■□□ 2.22
SMARCD2-206ENST00000577990 DIEXFQ68CQ4 756 aaKnown RBP28.89■■■□□ 2.22
SMARCD2-206ENST00000577990 MBIPQ9NS73 344 aa28.89■■■□□ 2.22
SMARCD2-206ENST00000577990 PXDNLA1KZ92 1463 aa28.89■■■□□ 2.22
SMARCD2-206ENST00000577990 C10orf71Q711Q0 1435 aa28.88■■■□□ 2.21
SMARCD2-206ENST00000577990 DZIP3Q86Y13 1208 aaKnown RBP28.88■■■□□ 2.21
SMARCD2-206ENST00000577990 WWC1Q8IX03 1113 aa28.88■■■□□ 2.21
SMARCD2-206ENST00000577990 TM4SF1P30408 202 aa28.87■■■□□ 2.21
SMARCD2-206ENST00000577990 BCORQ6W2J9 1755 aa28.87■■■□□ 2.21
SMARCD2-206ENST00000577990 ERBB4Q15303 1308 aa28.87■■■□□ 2.21
SMARCD2-206ENST00000577990 CAMTA2O94983 1202 aa28.86■■■□□ 2.21
SMARCD2-206ENST00000577990 DDR1Q08345 913 aa28.86■■■□□ 2.21
SMARCD2-206ENST00000577990 KRT24Q2M2I5 525 aa28.86■■■□□ 2.21
SMARCD2-206ENST00000577990 EIF2S2P20042 333 aaKnown RBP28.85■■■□□ 2.21
SMARCD2-206ENST00000577990 NFIXQ14938 502 aa28.84■■■□□ 2.21
SMARCD2-206ENST00000577990 BRCA1P38398 1863 aaKnown RBP28.84■■■□□ 2.21
SMARCD2-206ENST00000577990 POLRMTO00411 1230 aaKnown RBP28.83■■■□□ 2.21
SMARCD2-206ENST00000577990 SALL2Q9Y467 1007 aaPredicted RBP28.83■■■□□ 2.21
SMARCD2-206ENST00000577990 HOXB7P09629 217 aa28.82■■■□□ 2.2
SMARCD2-206ENST00000577990 AFDNP55196 1824 aaKnown RBP28.81■■■□□ 2.2
SMARCD2-206ENST00000577990 A0A0G2JLW4 131 aa28.81■■■□□ 2.2
SMARCD2-206ENST00000577990 MYL6BP14649 208 aa28.81■■■□□ 2.2
SMARCD2-206ENST00000577990 IL16Q14005 1332 aa28.8■■■□□ 2.2
SMARCD2-206ENST00000577990 TBC1D9BQ66K14 1250 aa28.8■■■□□ 2.2
SMARCD2-206ENST00000577990 NGEFQ8N5V2 710 aa28.8■■■□□ 2.2
SMARCD2-206ENST00000577990 DUSP27Q5VZP5 1158 aa28.79■■■□□ 2.2
SMARCD2-206ENST00000577990 BICDL1Q6ZP65 573 aa28.79■■■□□ 2.2
SMARCD2-206ENST00000577990 NECTIN2Q92692 538 aa28.79■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms