RNA–Protein interactions for RNA: ENST00000577854.1

CDKN2A-211, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 3

Gene CDKN2A, Length 442 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-211ENST00000577854 SRP68Q9UHB9 627 aaKnown RBP12.13□□□□□ -0.47
CDKN2A-211ENST00000577854 ZBTB1Q9Y2K1 713 aa12.13□□□□□ -0.47
CDKN2A-211ENST00000577854 QSER1Q2KHR3 1735 aa12.13□□□□□ -0.47
CDKN2A-211ENST00000577854 TSPYL4Q9UJ04 414 aa12.12□□□□□ -0.47
CDKN2A-211ENST00000577854 ADAMTS7Q9UKP4 1686 aa12.12□□□□□ -0.47
CDKN2A-211ENST00000577854 COL15A1P39059 1388 aa12.11□□□□□ -0.47
CDKN2A-211ENST00000577854 SNRPA1P09661 255 aaKnown RBP12.11□□□□□ -0.47
CDKN2A-211ENST00000577854 GPR162Q16538 588 aa12.11□□□□□ -0.47
CDKN2A-211ENST00000577854 USPL1Q5W0Q7 1092 aa12.11□□□□□ -0.47
CDKN2A-211ENST00000577854 NLGN1Q8N2Q7 840 aa12.11□□□□□ -0.47
CDKN2A-211ENST00000577854 PARP3Q9Y6F1 533 aa12.11□□□□□ -0.47
CDKN2A-211ENST00000577854 TJP1Q07157 1748 aa12.11□□□□□ -0.47
CDKN2A-211ENST00000577854 SOS1Q07889 1333 aaPredicted RBP12.11□□□□□ -0.47
CDKN2A-211ENST00000577854 UBR3Q6ZT12 1888 aa12.1□□□□□ -0.47
CDKN2A-211ENST00000577854 SENP3-EIF4A1A0A087X0R7 540 aa12.1□□□□□ -0.47
CDKN2A-211ENST00000577854 PRAMEF22A3QJZ6 481 aa12.1□□□□□ -0.47
CDKN2A-211ENST00000577854 A1BGP04217 495 aa12.1□□□□□ -0.47
CDKN2A-211ENST00000577854 GYS1P13807 737 aa12.1□□□□□ -0.47
CDKN2A-211ENST00000577854 PIP4K2AP48426 406 aaPredicted RBP12.1□□□□□ -0.47
CDKN2A-211ENST00000577854 CCDC184Q52MB2 194 aa12.1□□□□□ -0.47
CDKN2A-211ENST00000577854 NLGN2Q8NFZ4 835 aa12.1□□□□□ -0.47
CDKN2A-211ENST00000577854 WWC3Q9ULE0 1092 aa12.1□□□□□ -0.47
CDKN2A-211ENST00000577854 USP42Q9H9J4 1324 aaKnown RBP12.1□□□□□ -0.47
CDKN2A-211ENST00000577854 ZNF831Q5JPB2 1677 aa12.1□□□□□ -0.47
CDKN2A-211ENST00000577854 VIRMAQ69YN4 1812 aaKnown RBP12.09□□□□□ -0.47
CDKN2A-211ENST00000577854 COL5A3P25940 1745 aaPredicted RBP12.09□□□□□ -0.47
CDKN2A-211ENST00000577854 A0A087WZG4 1122 aa12.09□□□□□ -0.47
CDKN2A-211ENST00000577854 APAF1O14727 1248 aa12.09□□□□□ -0.47
CDKN2A-211ENST00000577854 NPHP1O15259 732 aa12.09□□□□□ -0.47
CDKN2A-211ENST00000577854 BICDL1Q6ZP65 573 aa12.09□□□□□ -0.47
CDKN2A-211ENST00000577854 FKBP8Q14318 412 aa12.08□□□□□ -0.48
CDKN2A-211ENST00000577854 TBC1D2BQ9UPU7 963 aa12.08□□□□□ -0.48
CDKN2A-211ENST00000577854 USP16Q9Y5T5 823 aa12.08□□□□□ -0.48
CDKN2A-211ENST00000577854 NGEFQ8N5V2 710 aa12.07□□□□□ -0.48
CDKN2A-211ENST00000577854 UBR2Q8IWV8 1755 aa12.06□□□□□ -0.48
CDKN2A-211ENST00000577854 EIF2S2P20042 333 aaKnown RBP12.06□□□□□ -0.48
CDKN2A-211ENST00000577854 IL6STP40189 918 aaPredicted RBP12.06□□□□□ -0.48
CDKN2A-211ENST00000577854 EIF4A1P60842 406 aaKnown RBP12.06□□□□□ -0.48
CDKN2A-211ENST00000577854 DZIP3Q86Y13 1208 aaKnown RBP12.06□□□□□ -0.48
CDKN2A-211ENST00000577854 FAM9BQ8IZU0 186 aa12.06□□□□□ -0.48
CDKN2A-211ENST00000577854 NARFQ9UHQ1 456 aa12.06□□□□□ -0.48
CDKN2A-211ENST00000577854 CD2APQ9Y5K6 639 aa12.06□□□□□ -0.48
CDKN2A-211ENST00000577854 SIPA1L3O60292 1781 aaPredicted RBP12.05□□□□□ -0.48
CDKN2A-211ENST00000577854 EIF5P55010 431 aaKnown RBP12.05□□□□□ -0.48
CDKN2A-211ENST00000577854 NECTIN2Q92692 538 aa12.05□□□□□ -0.48
CDKN2A-211ENST00000577854 SALL2Q9Y467 1007 aaPredicted RBP12.05□□□□□ -0.48
CDKN2A-211ENST00000577854 CICQ96RK0 1608 aaPredicted RBP12.04□□□□□ -0.48
CDKN2A-211ENST00000577854 GIGYF1O75420 1035 aaPredicted RBP12.04□□□□□ -0.48
CDKN2A-211ENST00000577854 MYL6BP14649 208 aa12.04□□□□□ -0.48
CDKN2A-211ENST00000577854 CALD1Q05682 793 aaKnown RBP12.04□□□□□ -0.48
CDKN2A-211ENST00000577854 TRIM35Q9UPQ4 493 aa12.04□□□□□ -0.48
CDKN2A-211ENST00000577854 MYH14Q7Z406 1995 aaKnown RBP12.04□□□□□ -0.48
CDKN2A-211ENST00000577854 DLG5Q8TDM6 1919 aa12.03□□□□□ -0.48
CDKN2A-211ENST00000577854 DDR1Q08345 913 aa12.03□□□□□ -0.48
CDKN2A-211ENST00000577854 NFIXQ14938 502 aa12.03□□□□□ -0.48
CDKN2A-211ENST00000577854 ZNF652Q9Y2D9 606 aa12.03□□□□□ -0.48
CDKN2A-211ENST00000577854 C4AP0C0L4 1744 aa12.03□□□□□ -0.48
CDKN2A-211ENST00000577854 POLRMTO00411 1230 aaKnown RBP12.02□□□□□ -0.49
CDKN2A-211ENST00000577854 YY1P25490 414 aa12.02□□□□□ -0.49
CDKN2A-211ENST00000577854 KIF6Q6ZMV9 814 aa12.02□□□□□ -0.49
CDKN2A-211ENST00000577854 A0A0G2JLW4 131 aa12.01□□□□□ -0.49
CDKN2A-211ENST00000577854 FAM177BA6PVY3 158 aa12.01□□□□□ -0.49
CDKN2A-211ENST00000577854 SERPINB2P05120 415 aa12.01□□□□□ -0.49
CDKN2A-211ENST00000577854 TBC1D9BQ66K14 1250 aa12.01□□□□□ -0.49
CDKN2A-211ENST00000577854 SETDB2Q96T68 719 aa12.01□□□□□ -0.49
CDKN2A-211ENST00000577854 BABAM1Q9NWV8 329 aa12.01□□□□□ -0.49
CDKN2A-211ENST00000577854 NBPF26B4DH59 902 aa12□□□□□ -0.49
CDKN2A-211ENST00000577854 CHL1O00533 1208 aa12□□□□□ -0.49
CDKN2A-211ENST00000577854 GRIN3BO60391 1043 aa12□□□□□ -0.49
CDKN2A-211ENST00000577854 CAMTA2O94983 1202 aa12□□□□□ -0.49
CDKN2A-211ENST00000577854 TM4SF1P30408 202 aa12□□□□□ -0.49
CDKN2A-211ENST00000577854 GNAI1P63096 354 aa12□□□□□ -0.49
CDKN2A-211ENST00000577854 KRT24Q2M2I5 525 aa12□□□□□ -0.49
CDKN2A-211ENST00000577854 NBPF10Q6P3W6 841 aaKnown RBP12□□□□□ -0.49
CDKN2A-211ENST00000577854 NBPF15Q8N660 670 aa12□□□□□ -0.49
CDKN2A-211ENST00000577854 CFAP44Q96MT7 982 aa12□□□□□ -0.49
CDKN2A-211ENST00000577854 BCL2L12Q9HB09 334 aa12□□□□□ -0.49
CDKN2A-211ENST00000577854 BCS1LQ9Y276 419 aa12□□□□□ -0.49
CDKN2A-211ENST00000577854 GOLGB1Q14789 3259 aaKnown RBP12□□□□□ -0.49
CDKN2A-211ENST00000577854 ANXA1P04083 346 aa11.99□□□□□ -0.49
CDKN2A-211ENST00000577854 DPEP1P16444 411 aa11.99□□□□□ -0.49
CDKN2A-211ENST00000577854 YBX3P16989 372 aaKnown RBP eCLIP11.99□□□□□ -0.49
CDKN2A-211ENST00000577854 TGFB2P61812 414 aa11.99□□□□□ -0.49
CDKN2A-211ENST00000577854 AIMP1Q12904 312 aaKnown RBP11.99□□□□□ -0.49
CDKN2A-211ENST00000577854 HDGFL1Q5TGJ6 251 aa11.99□□□□□ -0.49
CDKN2A-211ENST00000577854 CCDC24Q8N4L8 307 aa11.99□□□□□ -0.49
CDKN2A-211ENST00000577854 ZBTB3Q9H5J0 574 aa11.99□□□□□ -0.49
CDKN2A-211ENST00000577854 MBIPQ9NS73 344 aa11.99□□□□□ -0.49
CDKN2A-211ENST00000577854 IFT57Q9NWB7 429 aa11.99□□□□□ -0.49
CDKN2A-211ENST00000577854 CARMIL3Q8ND23 1372 aa11.99□□□□□ -0.49
CDKN2A-211ENST00000577854 C10orf71Q711Q0 1435 aa11.99□□□□□ -0.49
CDKN2A-211ENST00000577854 COL24A1Q17RW2 1714 aa11.99□□□□□ -0.49
CDKN2A-211ENST00000577854 KDM3BQ7LBC6 1761 aa11.99□□□□□ -0.49
CDKN2A-211ENST00000577854 ELL2O00472 640 aaPredicted RBP11.98□□□□□ -0.49
CDKN2A-211ENST00000577854 GTF2E1P29083 439 aaPredicted RBP11.98□□□□□ -0.49
CDKN2A-211ENST00000577854 CHRNA5P30532 468 aa11.98□□□□□ -0.49
CDKN2A-211ENST00000577854 ST5P78524 1137 aa11.98□□□□□ -0.49
CDKN2A-211ENST00000577854 NBPF5PQ86XG9 351 aaPredicted RBP11.98□□□□□ -0.49
CDKN2A-211ENST00000577854 CNBD1Q8NA66 436 aa11.98□□□□□ -0.49
CDKN2A-211ENST00000577854 NIP7Q9Y221 180 aaKnown RBP eCLIP11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms