RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 RC3H1Q5TC82 1133 aaKnown RBP16.46■□□□□ 0.23
MKS1-206ENST00000577824 DNAJC10Q8IXB1 793 aa16.46■□□□□ 0.23
MKS1-206ENST00000577824 ERBB4Q15303 1308 aa16.45■□□□□ 0.22
MKS1-206ENST00000577824 PRAMEF22A3QJZ6 481 aa16.45■□□□□ 0.22
MKS1-206ENST00000577824 C8orf58Q8NAV2 365 aa16.45■□□□□ 0.22
MKS1-206ENST00000577824 AKT1S1Q96B36 256 aa16.45■□□□□ 0.22
MKS1-206ENST00000577824 STARD3NLO95772 234 aa16.44■□□□□ 0.22
MKS1-206ENST00000577824 KCNQ4P56696 695 aa16.44■□□□□ 0.22
MKS1-206ENST00000577824 ANO8Q9HCE9 1232 aaPredicted RBP16.44■□□□□ 0.22
MKS1-206ENST00000577824 CT47B1P0C2W7 299 aaPredicted RBP16.43■□□□□ 0.22
MKS1-206ENST00000577824 CRKLP46109 303 aaKnown RBP16.43■□□□□ 0.22
MKS1-206ENST00000577824 EXOSC9Q06265 439 aaKnown RBP16.43■□□□□ 0.22
MKS1-206ENST00000577824 INTS5Q6P9B9 1019 aaKnown RBP16.43■□□□□ 0.22
MKS1-206ENST00000577824 TSPYL6Q8N831 410 aa16.43■□□□□ 0.22
MKS1-206ENST00000577824 USP16Q9Y5T5 823 aa16.43■□□□□ 0.22
MKS1-206ENST00000577824 C4AP0C0L4 1744 aa16.42■□□□□ 0.22
MKS1-206ENST00000577824 ZNF827Q17R98 1081 aa16.42■□□□□ 0.22
MKS1-206ENST00000577824 TWISTNBQ3B726 338 aaPredicted RBP16.42■□□□□ 0.22
MKS1-206ENST00000577824 CHMP4AQ9BY43 222 aa16.42■□□□□ 0.22
MKS1-206ENST00000577824 CCDC87Q9NVE4 849 aa16.42■□□□□ 0.22
MKS1-206ENST00000577824 SCN7AQ01118 1682 aa16.41■□□□□ 0.22
MKS1-206ENST00000577824 ZNF428Q96B54 188 aa16.41■□□□□ 0.22
MKS1-206ENST00000577824 CASZ1Q86V15 1759 aa16.41■□□□□ 0.22
MKS1-206ENST00000577824 VAMP4O75379 141 aa16.4■□□□□ 0.22
MKS1-206ENST00000577824 HDGFL1Q5TGJ6 251 aa16.4■□□□□ 0.22
MKS1-206ENST00000577824 LRP10Q7Z4F1 713 aa16.4■□□□□ 0.22
MKS1-206ENST00000577824 ZBTB1Q9Y2K1 713 aa16.4■□□□□ 0.22
MKS1-206ENST00000577824 BCORQ6W2J9 1755 aa16.4■□□□□ 0.22
MKS1-206ENST00000577824 SSFA2P28290 1259 aa16.39■□□□□ 0.21
MKS1-206ENST00000577824 IL6STP40189 918 aaPredicted RBP16.39■□□□□ 0.21
MKS1-206ENST00000577824 PDIA6Q15084 440 aa16.39■□□□□ 0.21
MKS1-206ENST00000577824 SLC15A2Q16348 729 aa16.39■□□□□ 0.21
MKS1-206ENST00000577824 AK7Q96M32 723 aa16.39■□□□□ 0.21
MKS1-206ENST00000577824 YTHDC1Q96MU7 727 aaKnown RBP16.39■□□□□ 0.21
MKS1-206ENST00000577824 COL15A1P39059 1388 aa16.38■□□□□ 0.21
MKS1-206ENST00000577824 NBPF26B4DH59 902 aa16.38■□□□□ 0.21
MKS1-206ENST00000577824 RPS6KA4O75676 772 aa16.38■□□□□ 0.21
MKS1-206ENST00000577824 EIF5P55010 431 aaKnown RBP16.38■□□□□ 0.21
MKS1-206ENST00000577824 NBPF14Q5TI25 921 aa16.38■□□□□ 0.21
MKS1-206ENST00000577824 NBPF10Q6P3W6 841 aaKnown RBP16.38■□□□□ 0.21
MKS1-206ENST00000577824 AMIGO3Q86WK7 504 aa16.38■□□□□ 0.21
MKS1-206ENST00000577824 NBPF15Q8N660 670 aa16.38■□□□□ 0.21
MKS1-206ENST00000577824 GNPATO15228 680 aa16.37■□□□□ 0.21
MKS1-206ENST00000577824 A1BGP04217 495 aa16.37■□□□□ 0.21
MKS1-206ENST00000577824 CCDC30Q5VVM6 783 aa16.37■□□□□ 0.21
MKS1-206ENST00000577824 DDX21Q9NR30 783 aaKnown RBP eCLIP16.37■□□□□ 0.21
MKS1-206ENST00000577824 STK32BQ9NY57 414 aa16.37■□□□□ 0.21
MKS1-206ENST00000577824 DBF4Q9UBU7 674 aaPredicted RBP16.37■□□□□ 0.21
MKS1-206ENST00000577824 CACNA1FO60840 1977 aa16.37■□□□□ 0.21
MKS1-206ENST00000577824 ELL2O00472 640 aaPredicted RBP16.36■□□□□ 0.21
MKS1-206ENST00000577824 RTCBQ9Y3I0 505 aaKnown RBP16.36■□□□□ 0.21
MKS1-206ENST00000577824 PNPLA7Q6ZV29 1317 aa16.36■□□□□ 0.21
MKS1-206ENST00000577824 COL24A1Q17RW2 1714 aa16.36■□□□□ 0.21
MKS1-206ENST00000577824 EIF2S2P20042 333 aaKnown RBP16.35■□□□□ 0.21
MKS1-206ENST00000577824 FLAD1Q8NFF5 587 aa16.35■□□□□ 0.21
MKS1-206ENST00000577824 CHPF2Q9P2E5 772 aa16.35■□□□□ 0.21
MKS1-206ENST00000577824 RGL2O15211 777 aa16.34■□□□□ 0.21
MKS1-206ENST00000577824 PROSER3Q2NL68 480 aa16.34■□□□□ 0.21
MKS1-206ENST00000577824 ALDH1L2Q3SY69 923 aa16.34■□□□□ 0.21
MKS1-206ENST00000577824 TFCP2L1Q9NZI6 479 aa16.34■□□□□ 0.21
MKS1-206ENST00000577824 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.33■□□□□ 0.2
MKS1-206ENST00000577824 CANXP27824 592 aaKnown RBP16.33■□□□□ 0.2
MKS1-206ENST00000577824 BRPF1P55201 1214 aaPredicted RBP16.33■□□□□ 0.2
MKS1-206ENST00000577824 HYPKQ9NX55 129 aa16.33■□□□□ 0.2
MKS1-206ENST00000577824 A0A087WZG4 1122 aa16.32■□□□□ 0.2
MKS1-206ENST00000577824 PIP4K2AP48426 406 aaPredicted RBP16.32■□□□□ 0.2
MKS1-206ENST00000577824 NECTIN2Q92692 538 aa16.32■□□□□ 0.2
MKS1-206ENST00000577824 STK31Q9BXU1 1019 aa16.32■□□□□ 0.2
MKS1-206ENST00000577824 USP42Q9H9J4 1324 aaKnown RBP16.32■□□□□ 0.2
MKS1-206ENST00000577824 RARSP54136 660 aaKnown RBP16.31■□□□□ 0.2
MKS1-206ENST00000577824 ARHGEF1Q92888 912 aaKnown RBP16.31■□□□□ 0.2
MKS1-206ENST00000577824 ARFGEF2Q9Y6D5 1785 aa16.31■□□□□ 0.2
MKS1-206ENST00000577824 MYL6BP14649 208 aa16.3■□□□□ 0.2
MKS1-206ENST00000577824 TRAPPC3LQ5T215 181 aa16.3■□□□□ 0.2
MKS1-206ENST00000577824 COL23A1Q86Y22 540 aaPredicted RBP16.3■□□□□ 0.2
MKS1-206ENST00000577824 SSH1Q8WYL5 1049 aa16.3■□□□□ 0.2
MKS1-206ENST00000577824 PHF14O94880 888 aa16.29■□□□□ 0.2
MKS1-206ENST00000577824 ANXA1P04083 346 aa16.29■□□□□ 0.2
MKS1-206ENST00000577824 NARFQ9UHQ1 456 aa16.29■□□□□ 0.2
MKS1-206ENST00000577824 SRCAPQ6ZRS2 3230 aa16.28■□□□□ 0.2
MKS1-206ENST00000577824 ATP10DQ9P241 1426 aa16.28■□□□□ 0.2
MKS1-206ENST00000577824 ANKRD36CQ5JPF3 1778 aa16.28■□□□□ 0.2
MKS1-206ENST00000577824 N4BP2Q86UW6 1770 aaPredicted RBP16.28■□□□□ 0.2
MKS1-206ENST00000577824 MAP3K15Q6ZN16 1313 aa16.28■□□□□ 0.2
MKS1-206ENST00000577824 ERVV-1B6SEH8 477 aa16.28■□□□□ 0.2
MKS1-206ENST00000577824 CAMTA2O94983 1202 aa16.28■□□□□ 0.2
MKS1-206ENST00000577824 SLC4A2P04920 1241 aa16.28■□□□□ 0.2
MKS1-206ENST00000577824 R3HDM1Q15032 1099 aaKnown RBP16.28■□□□□ 0.2
MKS1-206ENST00000577824 SMIM5Q71RC9 77 aa16.28■□□□□ 0.2
MKS1-206ENST00000577824 DZIP3Q86Y13 1208 aaKnown RBP16.28■□□□□ 0.2
MKS1-206ENST00000577824 MRPL50Q8N5N7 158 aaKnown RBP16.28■□□□□ 0.2
MKS1-206ENST00000577824 SLC16A10Q8TF71 515 aa16.28■□□□□ 0.2
MKS1-206ENST00000577824 FLIIQ13045 1269 aa16.27■□□□□ 0.2
MKS1-206ENST00000577824 TTLL7Q6ZT98 887 aa16.27■□□□□ 0.2
MKS1-206ENST00000577824 COPS6Q7L5N1 327 aa16.27■□□□□ 0.2
MKS1-206ENST00000577824 XAGE3Q8WTP9 111 aa16.27■□□□□ 0.2
MKS1-206ENST00000577824 PHAXQ9H814 394 aaKnown RBP16.27■□□□□ 0.2
MKS1-206ENST00000577824 PXDNLA1KZ92 1463 aa16.27■□□□□ 0.19
MKS1-206ENST00000577824 ADCY9O60503 1353 aa16.26■□□□□ 0.19
MKS1-206ENST00000577824 PTPRCP08575 1304 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms