RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 ZNF790Q6PG37 636 aa17.19■□□□□ 0.34
RNF43-202ENST00000577625 SLC4A10Q6U841 1118 aa17.19■□□□□ 0.34
RNF43-202ENST00000577625 PHAXQ9H814 394 aaKnown RBP17.19■□□□□ 0.34
RNF43-202ENST00000577625 GLI3P10071 1580 aa17.19■□□□□ 0.34
RNF43-202ENST00000577625 SLC39A6Q13433 755 aa17.19■□□□□ 0.34
RNF43-202ENST00000577625 MEIS3Q99687 375 aa17.19■□□□□ 0.34
RNF43-202ENST00000577625 UBR2Q8IWV8 1755 aa17.18■□□□□ 0.34
RNF43-202ENST00000577625 TOGARAM1Q9Y4F4 1720 aa17.18■□□□□ 0.34
RNF43-202ENST00000577625 PRAMEF22A3QJZ6 481 aa17.18■□□□□ 0.34
RNF43-202ENST00000577625 GCC1Q96CN9 775 aa17.18■□□□□ 0.34
RNF43-202ENST00000577625 PAPPAQ13219 1627 aa17.17■□□□□ 0.34
RNF43-202ENST00000577625 NRAPQ86VF7 1730 aa17.17■□□□□ 0.34
RNF43-202ENST00000577625 LAMB4A4D0S4 1761 aa17.17■□□□□ 0.34
RNF43-202ENST00000577625 NUCB1Q02818 461 aa17.16■□□□□ 0.34
RNF43-202ENST00000577625 ANXA1P04083 346 aa17.15■□□□□ 0.34
RNF43-202ENST00000577625 DBF4Q9UBU7 674 aaPredicted RBP17.15■□□□□ 0.34
RNF43-202ENST00000577625 DISP2A7MBM2 1401 aa17.15■□□□□ 0.34
RNF43-202ENST00000577625 TOM1O60784 492 aa17.15■□□□□ 0.34
RNF43-202ENST00000577625 NKX1-1Q15270 411 aaPredicted RBP17.15■□□□□ 0.34
RNF43-202ENST00000577625 ANKRD44Q8N8A2 993 aa17.15■□□□□ 0.34
RNF43-202ENST00000577625 CABP4P57796 275 aa17.14■□□□□ 0.33
RNF43-202ENST00000577625 CEP85Q6P2H3 762 aa17.14■□□□□ 0.33
RNF43-202ENST00000577625 RPAP2Q8IXW5 612 aaPredicted RBP17.14■□□□□ 0.33
RNF43-202ENST00000577625 ZNF496Q96IT1 587 aaPredicted RBP17.14■□□□□ 0.33
RNF43-202ENST00000577625 PROSER3Q2NL68 480 aa17.13■□□□□ 0.33
RNF43-202ENST00000577625 PIP4K2BP78356 416 aa17.13■□□□□ 0.33
RNF43-202ENST00000577625 ADCY9O60503 1353 aa17.13■□□□□ 0.33
RNF43-202ENST00000577625 CHD1LQ86WJ1 897 aa17.12■□□□□ 0.33
RNF43-202ENST00000577625 ITGB4P16144 1822 aa17.12■□□□□ 0.33
RNF43-202ENST00000577625 ERVV-2B6SEH9 535 aa17.12■□□□□ 0.33
RNF43-202ENST00000577625 TTC5Q8N0Z6 440 aa17.12■□□□□ 0.33
RNF43-202ENST00000577625 DDX54Q8TDD1 881 aaKnown RBP17.11■□□□□ 0.33
RNF43-202ENST00000577625 NWD2Q9ULI1 1742 aa17.11■□□□□ 0.33
RNF43-202ENST00000577625 PDIA6Q15084 440 aa17.11■□□□□ 0.33
RNF43-202ENST00000577625 KCPQ6ZWJ8 1503 aa17.1■□□□□ 0.33
RNF43-202ENST00000577625 PI4KAP2A4QPH2 592 aa17.1■□□□□ 0.33
RNF43-202ENST00000577625 PI4KAP1Q8N8J0 262 aa17.1■□□□□ 0.33
RNF43-202ENST00000577625 DNAAF4Q8WXU2 420 aa17.1■□□□□ 0.33
RNF43-202ENST00000577625 FMNL2Q96PY5 1086 aa17.1■□□□□ 0.33
RNF43-202ENST00000577625 LNPKQ9C0E8 428 aa17.1■□□□□ 0.33
RNF43-202ENST00000577625 DCTPP1Q9H773 170 aa17.1■□□□□ 0.33
RNF43-202ENST00000577625 DDX21Q9NR30 783 aaKnown RBP eCLIP17.1■□□□□ 0.33
RNF43-202ENST00000577625 HYPKQ9NX55 129 aa17.1■□□□□ 0.33
RNF43-202ENST00000577625 GNAI3P08754 354 aa17.09■□□□□ 0.33
RNF43-202ENST00000577625 ADAMTS2O95450 1211 aa17.09■□□□□ 0.33
RNF43-202ENST00000577625 GNAI2P04899 355 aa17.09■□□□□ 0.33
RNF43-202ENST00000577625 SNRPA1P09661 255 aaKnown RBP17.09■□□□□ 0.33
RNF43-202ENST00000577625 ANKRD45Q5TZF3 282 aa17.09■□□□□ 0.33
RNF43-202ENST00000577625 USP44Q9H0E7 712 aa17.09■□□□□ 0.33
RNF43-202ENST00000577625 BEND3Q5T5X7 828 aa17.08■□□□□ 0.33
RNF43-202ENST00000577625 SRCIN1Q9C0H9 1055 aa17.08■□□□□ 0.33
RNF43-202ENST00000577625 KAT6BQ8WYB5 2073 aa17.08■□□□□ 0.32
RNF43-202ENST00000577625 TNS2Q63HR2 1409 aa17.08■□□□□ 0.32
RNF43-202ENST00000577625 UBAP1LF5GYI3 381 aa17.07■□□□□ 0.32
RNF43-202ENST00000577625 USP16Q9Y5T5 823 aa17.07■□□□□ 0.32
RNF43-202ENST00000577625 LRP6O75581 1613 aa17.07■□□□□ 0.32
RNF43-202ENST00000577625 HMMRO75330 724 aa17.06■□□□□ 0.32
RNF43-202ENST00000577625 KSR2Q6VAB6 950 aa17.06■□□□□ 0.32
RNF43-202ENST00000577625 MAP3K2Q9Y2U5 619 aa17.06■□□□□ 0.32
RNF43-202ENST00000577625 LRRFIP2Q9Y608 721 aaKnown RBP17.05■□□□□ 0.32
RNF43-202ENST00000577625 ARFGEF2Q9Y6D5 1785 aa17.05■□□□□ 0.32
RNF43-202ENST00000577625 NUTM2BA6NNL0 878 aaPredicted RBP17.05■□□□□ 0.32
RNF43-202ENST00000577625 NUTM2EB1AL46 878 aaPredicted RBP17.05■□□□□ 0.32
RNF43-202ENST00000577625 UBTFL1P0CB47 393 aaPredicted RBP17.05■□□□□ 0.32
RNF43-202ENST00000577625 LRP10Q7Z4F1 713 aa17.05■□□□□ 0.32
RNF43-202ENST00000577625 NUTM2AQ8IVF1 878 aaPredicted RBP17.05■□□□□ 0.32
RNF43-202ENST00000577625 SLIT2O94813 1529 aa17.05■□□□□ 0.32
RNF43-202ENST00000577625 PDCL3Q9H2J4 239 aa17.04■□□□□ 0.32
RNF43-202ENST00000577625 SPATA31A1Q5TZJ5 1347 aa17.03■□□□□ 0.32
RNF43-202ENST00000577625 MYL6BP14649 208 aa17.03■□□□□ 0.32
RNF43-202ENST00000577625 AIMP1Q12904 312 aaKnown RBP17.03■□□□□ 0.32
RNF43-202ENST00000577625 DOT1LQ8TEK3 1739 aa17.03■□□□□ 0.32
RNF43-202ENST00000577625 AFDNP55196 1824 aaKnown RBP17.02■□□□□ 0.32
RNF43-202ENST00000577625 SEC24BO95487 1268 aa17.02■□□□□ 0.32
RNF43-202ENST00000577625 DDX58O95786 925 aaKnown RBP17.02■□□□□ 0.32
RNF43-202ENST00000577625 XRCC6P12956 609 aaKnown RBP eCLIP17.02■□□□□ 0.322e-6■□□□□ 8.9
RNF43-202ENST00000577625 PNMA6EA0A0J9YXQ4 647 aa17.02■□□□□ 0.31
RNF43-202ENST00000577625 GOLGA6L3A6NEY3 463 aa17.02■□□□□ 0.31
RNF43-202ENST00000577625 ALDH1L1O75891 902 aa17.02■□□□□ 0.31
RNF43-202ENST00000577625 TPM2P07951 284 aa17.02■□□□□ 0.31
RNF43-202ENST00000577625 NBPF7P0C2Y1 421 aaPredicted RBP17.02■□□□□ 0.31
RNF43-202ENST00000577625 ATP8B2P98198 1209 aa17.02■□□□□ 0.31
RNF43-202ENST00000577625 XAGE3Q8WTP9 111 aa17.02■□□□□ 0.31
RNF43-202ENST00000577625 TMOD3Q9NYL9 352 aa17.02■□□□□ 0.31
RNF43-202ENST00000577625 FSD2A1L4K1 749 aa17.01■□□□□ 0.31
RNF43-202ENST00000577625 BMP2KLQ5H9B9 411 aa17.01■□□□□ 0.31
RNF43-202ENST00000577625 NUP188Q5SRE5 1749 aa17.01■□□□□ 0.31
RNF43-202ENST00000577625 PIP4K2AP48426 406 aaPredicted RBP17.01■□□□□ 0.31
RNF43-202ENST00000577625 COPS6Q7L5N1 327 aa17■□□□□ 0.31
RNF43-202ENST00000577625 ERBB4Q15303 1308 aa17■□□□□ 0.31
RNF43-202ENST00000577625 EXOC5O00471 708 aa16.99■□□□□ 0.31
RNF43-202ENST00000577625 CWF19L2Q2TBE0 894 aaKnown RBP16.99■□□□□ 0.31
RNF43-202ENST00000577625 LINS1Q8NG48 757 aa16.99■□□□□ 0.31
RNF43-202ENST00000577625 PIGBQ92521 554 aa16.99■□□□□ 0.31
RNF43-202ENST00000577625 THRAP3Q9Y2W1 955 aaKnown RBP16.99■□□□□ 0.31
RNF43-202ENST00000577625 JCADQ9P266 1359 aa16.99■□□□□ 0.31
RNF43-202ENST00000577625 SPATA31A5Q5VU36 1347 aa16.99■□□□□ 0.31
RNF43-202ENST00000577625 SPATA31A7Q8IWB4 1347 aa16.99■□□□□ 0.31
RNF43-202ENST00000577625 BCL9O00512 1426 aa16.99■□□□□ 0.31
RNF43-202ENST00000577625 PTCD1O75127 700 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms