RNA–Protein interactions for RNA: ENST00000577134.1

SPOP-222, Transcript of speckle type BTB/POZ protein, human

TSL 2

Gene SPOP, Length 421 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SPOP-222	ENST00000577134	CYP19A1	P11511	503 aa	Predicted RBP	12.84	□□□□□ -0.35
SPOP-222	ENST00000577134	RREB1	Q92766	1687 aa		12.83	□□□□□ -0.35
SPOP-222	ENST00000577134	HDGFL1	Q5TGJ6	251 aa		12.83	□□□□□ -0.36
SPOP-222	ENST00000577134	TCERG1	O14776	1098 aa	Known RBP	12.82	□□□□□ -0.36
SPOP-222	ENST00000577134	STARD3NL	O95772	234 aa		12.82	□□□□□ -0.36
SPOP-222	ENST00000577134	A1BG	P04217	495 aa		12.82	□□□□□ -0.36
SPOP-222	ENST00000577134	PIP4K2A	P48426	406 aa	Predicted RBP	12.82	□□□□□ -0.36
SPOP-222	ENST00000577134	SOS1	Q07889	1333 aa	Predicted RBP	12.82	□□□□□ -0.36
SPOP-222	ENST00000577134	C4B	P0C0L5	1744 aa		12.82	□□□□□ -0.36
SPOP-222	ENST00000577134	NUP188	Q5SRE5	1749 aa		12.82	□□□□□ -0.36
SPOP-222	ENST00000577134	MYH14	Q7Z406	1995 aa	Known RBP	12.81	□□□□□ -0.36
SPOP-222	ENST00000577134	CRKL	P46109	303 aa	Known RBP	12.81	□□□□□ -0.36
SPOP-222	ENST00000577134	INTS5	Q6P9B9	1019 aa	Known RBP	12.81	□□□□□ -0.36
SPOP-222	ENST00000577134	NBPF26	B4DH59	902 aa		12.8	□□□□□ -0.36
SPOP-222	ENST00000577134	ANXA1	P04083	346 aa		12.8	□□□□□ -0.36
SPOP-222	ENST00000577134	CANX	P27824	592 aa	Known RBP	12.8	□□□□□ -0.36
SPOP-222	ENST00000577134	PROSER3	Q2NL68	480 aa		12.8	□□□□□ -0.36
SPOP-222	ENST00000577134	NBPF14	Q5TI25	921 aa		12.8	□□□□□ -0.36
SPOP-222	ENST00000577134	CCDC30	Q5VVM6	783 aa		12.8	□□□□□ -0.36
SPOP-222	ENST00000577134	NBPF10	Q6P3W6	841 aa	Known RBP	12.8	□□□□□ -0.36
SPOP-222	ENST00000577134	NBPF15	Q8N660	670 aa		12.8	□□□□□ -0.36
SPOP-222	ENST00000577134	CCDC87	Q9NVE4	849 aa		12.8	□□□□□ -0.36
SPOP-222	ENST00000577134	CHPF2	Q9P2E5	772 aa		12.8	□□□□□ -0.36
SPOP-222	ENST00000577134	ZBTB1	Q9Y2K1	713 aa		12.8	□□□□□ -0.36
SPOP-222	ENST00000577134	CNTNAP4	Q9C0A0	1308 aa		12.8	□□□□□ -0.36
SPOP-222	ENST00000577134	CT47B1	P0C2W7	299 aa	Predicted RBP	12.79	□□□□□ -0.36
SPOP-222	ENST00000577134	MYL6B	P14649	208 aa		12.79	□□□□□ -0.36
SPOP-222	ENST00000577134	PDIA6	Q15084	440 aa		12.79	□□□□□ -0.36
SPOP-222	ENST00000577134	ZNF827	Q17R98	1081 aa		12.79	□□□□□ -0.36
SPOP-222	ENST00000577134	RC3H1	Q5TC82	1133 aa	Known RBP	12.79	□□□□□ -0.36
SPOP-222	ENST00000577134	GNPAT	O15228	680 aa		12.78	□□□□□ -0.36
SPOP-222	ENST00000577134	HMGB2	P26583	209 aa	Known RBP	12.78	□□□□□ -0.36
SPOP-222	ENST00000577134	SMIM5	Q71RC9	77 aa		12.78	□□□□□ -0.36
SPOP-222	ENST00000577134	SSH1	Q8WYL5	1049 aa		12.78	□□□□□ -0.36
SPOP-222	ENST00000577134	AKT1S1	Q96B36	256 aa		12.78	□□□□□ -0.36
SPOP-222	ENST00000577134	AK7	Q96M32	723 aa		12.78	□□□□□ -0.36
SPOP-222	ENST00000577134	BCL2L13	Q9BXK5	485 aa		12.78	□□□□□ -0.36
SPOP-222	ENST00000577134	SLC4A2	P04920	1241 aa		12.77	□□□□□ -0.37
SPOP-222	ENST00000577134	RARS	P54136	660 aa	Known RBP	12.77	□□□□□ -0.37
SPOP-222	ENST00000577134	AMIGO3	Q86WK7	504 aa		12.77	□□□□□ -0.37
SPOP-222	ENST00000577134	ZNF428	Q96B54	188 aa		12.77	□□□□□ -0.37
SPOP-222	ENST00000577134	STK31	Q9BXU1	1019 aa		12.77	□□□□□ -0.37
SPOP-222	ENST00000577134	CHMP4A	Q9BY43	222 aa		12.77	□□□□□ -0.37
SPOP-222	ENST00000577134	ANO8	Q9HCE9	1232 aa	Predicted RBP	12.77	□□□□□ -0.37
SPOP-222	ENST00000577134	DDX21	Q9NR30	783 aa	Known RBP eCLIP	12.77	□□□□□ -0.37
SPOP-222	ENST00000577134	DBF4	Q9UBU7	674 aa	Predicted RBP	12.77	□□□□□ -0.37
SPOP-222	ENST00000577134	ZNF330	Q9Y3S2	320 aa	Predicted RBP	12.77	□□□□□ -0.37
SPOP-222	ENST00000577134	ERBB4	Q15303	1308 aa		12.77	□□□□□ -0.37
SPOP-222	ENST00000577134	TUBGCP6	Q96RT7	1819 aa		12.76	□□□□□ -0.37
SPOP-222	ENST00000577134	UBR3	Q6ZT12	1888 aa		12.76	□□□□□ -0.37
SPOP-222	ENST00000577134	RPS6KA4	O75676	772 aa		12.76	□□□□□ -0.37
SPOP-222	ENST00000577134	IL6ST	P40189	918 aa	Predicted RBP	12.76	□□□□□ -0.37
SPOP-222	ENST00000577134	ALDH1L2	Q3SY69	923 aa		12.76	□□□□□ -0.37
SPOP-222	ENST00000577134	G2E3	Q7L622	706 aa		12.76	□□□□□ -0.37
SPOP-222	ENST00000577134	LRP10	Q7Z4F1	713 aa		12.76	□□□□□ -0.37
SPOP-222	ENST00000577134	MRPL50	Q8N5N7	158 aa	Known RBP	12.76	□□□□□ -0.37
SPOP-222	ENST00000577134	STK32B	Q9NY57	414 aa		12.76	□□□□□ -0.37
SPOP-222	ENST00000577134	RTCB	Q9Y3I0	505 aa	Known RBP	12.76	□□□□□ -0.37
SPOP-222	ENST00000577134	SOCS7	O14512	581 aa		12.75	□□□□□ -0.37
SPOP-222	ENST00000577134	CACNA1F	O60840	1977 aa		12.75	□□□□□ -0.37
SPOP-222	ENST00000577134	BCAR3	O75815	825 aa		12.75	□□□□□ -0.37
SPOP-222	ENST00000577134	PHF14	O94880	888 aa		12.75	□□□□□ -0.37
SPOP-222	ENST00000577134	EIF5	P55010	431 aa	Known RBP	12.75	□□□□□ -0.37
SPOP-222	ENST00000577134	SLC15A2	Q16348	729 aa		12.75	□□□□□ -0.37
SPOP-222	ENST00000577134	PHAX	Q9H814	394 aa	Known RBP	12.75	□□□□□ -0.37
SPOP-222	ENST00000577134	SMC4	Q9NTJ3	1288 aa		12.75	□□□□□ -0.37
SPOP-222	ENST00000577134	HYPK	Q9NX55	129 aa		12.75	□□□□□ -0.37
SPOP-222	ENST00000577134	TFCP2L1	Q9NZI6	479 aa		12.75	□□□□□ -0.37
SPOP-222	ENST00000577134	RCAN3	Q9UKA8	241 aa		12.75	□□□□□ -0.37
SPOP-222	ENST00000577134	AIMP1	Q12904	312 aa	Known RBP	12.74	□□□□□ -0.37
SPOP-222	ENST00000577134	TRAPPC3L	Q5T215	181 aa		12.74	□□□□□ -0.37
SPOP-222	ENST00000577134	COPS6	Q7L5N1	327 aa		12.74	□□□□□ -0.37
SPOP-222	ENST00000577134	XAGE3	Q8WTP9	111 aa		12.74	□□□□□ -0.37
SPOP-222	ENST00000577134	ARX	Q96QS3	562 aa		12.74	□□□□□ -0.37
SPOP-222	ENST00000577134	COL15A1	P39059	1388 aa		12.73	□□□□□ -0.37
SPOP-222	ENST00000577134	RPL17-C18orf32	A0A0A6YYL6	228 aa	Known RBP	12.73	□□□□□ -0.37
SPOP-222	ENST00000577134	TTLL7	Q6ZT98	887 aa		12.73	□□□□□ -0.37
SPOP-222	ENST00000577134	NPM2	Q86SE8	214 aa	Known RBP	12.73	□□□□□ -0.37
SPOP-222	ENST00000577134	ARHGEF1	Q92888	912 aa	Known RBP	12.73	□□□□□ -0.37
SPOP-222	ENST00000577134	TBC1D2B	Q9UPU7	963 aa		12.73	□□□□□ -0.37
SPOP-222	ENST00000577134	PNPLA7	Q6ZV29	1317 aa		12.72	□□□□□ -0.37
SPOP-222	ENST00000577134	QSER1	Q2KHR3	1735 aa		12.72	□□□□□ -0.37
SPOP-222	ENST00000577134		A0A087WZG4	1122 aa		12.72	□□□□□ -0.37
SPOP-222	ENST00000577134	SSFA2	P28290	1259 aa		12.72	□□□□□ -0.37
SPOP-222	ENST00000577134	FLII	Q13045	1269 aa		12.72	□□□□□ -0.37
SPOP-222	ENST00000577134	COL23A1	Q86Y22	540 aa	Predicted RBP	12.72	□□□□□ -0.37
SPOP-222	ENST00000577134	NOB1	Q9ULX3	412 aa	Known RBP	12.72	□□□□□ -0.37
SPOP-222	ENST00000577134	C4A	P0C0L4	1744 aa		12.71	□□□□□ -0.37
SPOP-222	ENST00000577134	MSH5	O43196	834 aa		12.71	□□□□□ -0.37
SPOP-222	ENST00000577134	ADRA2B	P18089	450 aa		12.71	□□□□□ -0.37
SPOP-222	ENST00000577134	RFC4	P35249	363 aa		12.71	□□□□□ -0.37
SPOP-222	ENST00000577134	BRPF1	P55201	1214 aa	Predicted RBP	12.71	□□□□□ -0.37
SPOP-222	ENST00000577134	DZIP3	Q86Y13	1208 aa	Known RBP	12.71	□□□□□ -0.37
SPOP-222	ENST00000577134	FKBP5	Q13451	457 aa	Predicted RBP	12.7	□□□□□ -0.38
SPOP-222	ENST00000577134	USPL1	Q5W0Q7	1092 aa		12.7	□□□□□ -0.38
SPOP-222	ENST00000577134	KIF6	Q6ZMV9	814 aa		12.7	□□□□□ -0.38
SPOP-222	ENST00000577134	ANKRD13D	Q6ZTN6	518 aa		12.7	□□□□□ -0.38
SPOP-222	ENST00000577134	FRAT1	Q92837	279 aa	Predicted RBP	12.7	□□□□□ -0.38
SPOP-222	ENST00000577134	ZBTB3	Q9H5J0	574 aa		12.7	□□□□□ -0.38
SPOP-222	ENST00000577134	SRP68	Q9UHB9	627 aa	Known RBP	12.7	□□□□□ -0.38

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