RNA–Protein interactions for RNA: ENST00000576708.5

NUP88-212, Transcript of nucleoporin 88, humanhuman

TSL 5

Gene NUP88, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-212ENST00000576708 SPATA31A7Q8IWB4 1347 aa8.97□□□□□ -0.97
NUP88-212ENST00000576708 POLR3AO14802 1390 aaPredicted RBP8.97□□□□□ -0.97
NUP88-212ENST00000576708 ITSN1Q15811 1721 aa8.97□□□□□ -0.97
NUP88-212ENST00000576708 KIAA1210Q9ULL0 1709 aa8.97□□□□□ -0.97
NUP88-212ENST00000576708 PHRF1Q9P1Y6 1649 aaKnown RBP8.96□□□□□ -0.98
NUP88-212ENST00000576708 SOWAHBA6NEL2 793 aa8.96□□□□□ -0.98
NUP88-212ENST00000576708 SLC4A3P48751 1232 aa8.96□□□□□ -0.98
NUP88-212ENST00000576708 SF3B2Q13435 895 aaKnown RBP8.96□□□□□ -0.98
NUP88-212ENST00000576708 NEUROD1Q13562 356 aa8.96□□□□□ -0.98
NUP88-212ENST00000576708 SLF2Q8IX21 1173 aa8.96□□□□□ -0.98
NUP88-212ENST00000576708 HPS5Q9UPZ3 1129 aa8.96□□□□□ -0.98
NUP88-212ENST00000576708 TOPAZ1Q8N9V7 1692 aa8.96□□□□□ -0.98
NUP88-212ENST00000576708 CENPJQ9HC77 1338 aaPredicted RBP8.96□□□□□ -0.98
NUP88-212ENST00000576708 ABTB2Q8N961 1025 aa8.95□□□□□ -0.98
NUP88-212ENST00000576708 USP35Q9P2H5 1018 aa8.95□□□□□ -0.98
NUP88-212ENST00000576708 PPIP5K1Q6PFW1 1433 aa8.95□□□□□ -0.98
NUP88-212ENST00000576708 DDRGK1Q96HY6 314 aa8.94□□□□□ -0.98
NUP88-212ENST00000576708 CABP1Q9NZU7 370 aa8.94□□□□□ -0.98
NUP88-212ENST00000576708 SPATA31A1Q5TZJ5 1347 aa8.94□□□□□ -0.98
NUP88-212ENST00000576708 ZBTB7CA1YPR0 619 aa8.93□□□□□ -0.98
NUP88-212ENST00000576708 CFHP08603 1231 aa8.93□□□□□ -0.98
NUP88-212ENST00000576708 EVA1CP58658 441 aa8.93□□□□□ -0.98
NUP88-212ENST00000576708 PPP4CP60510 307 aa8.93□□□□□ -0.98
NUP88-212ENST00000576708 LARP1Q6PKG0 1096 aaKnown RBP8.93□□□□□ -0.98
NUP88-212ENST00000576708 THSD4Q6ZMP0 1018 aa8.93□□□□□ -0.98
NUP88-212ENST00000576708 QRICH2Q9H0J4 1663 aa8.92□□□□□ -0.98
NUP88-212ENST00000576708 THSD7AQ9UPZ6 1657 aa8.92□□□□□ -0.98
NUP88-212ENST00000576708 CAMTA1Q9Y6Y1 1673 aa8.92□□□□□ -0.98
NUP88-212ENST00000576708 NRKQ7Z2Y5 1582 aa8.92□□□□□ -0.98
NUP88-212ENST00000576708 USP19O94966 1318 aa8.92□□□□□ -0.98
NUP88-212ENST00000576708 BAG6P46379 1132 aa8.92□□□□□ -0.98
NUP88-212ENST00000576708 PTPN5P54829 565 aa8.92□□□□□ -0.98
NUP88-212ENST00000576708 WBP1LQ9NX94 342 aa8.92□□□□□ -0.98
NUP88-212ENST00000576708 SSH2Q76I76 1423 aa8.91□□□□□ -0.98
NUP88-212ENST00000576708 GCP02774 474 aa8.91□□□□□ -0.98
NUP88-212ENST00000576708 GCGRP47871 477 aa8.91□□□□□ -0.98
NUP88-212ENST00000576708 NLRP13Q86W25 1043 aa8.91□□□□□ -0.98
NUP88-212ENST00000576708 NUTM1Q86Y26 1132 aa8.91□□□□□ -0.98
NUP88-212ENST00000576708 TSR3Q9UJK0 312 aaKnown RBP8.91□□□□□ -0.98
NUP88-212ENST00000576708 TRPM1Q7Z4N2 1603 aa8.91□□□□□ -0.98
NUP88-212ENST00000576708 TRIM37O94972 964 aa8.9□□□□□ -0.98
NUP88-212ENST00000576708 EZH2Q15910 746 aaKnown RBP8.9□□□□□ -0.98
NUP88-212ENST00000576708 TMEM132AQ24JP5 1023 aa8.9□□□□□ -0.98
NUP88-212ENST00000576708 SPIRE2Q8WWL2 714 aa8.9□□□□□ -0.98
NUP88-212ENST00000576708 LMO7Q8WWI1 1683 aa8.9□□□□□ -0.98
NUP88-212ENST00000576708 USP6P35125 1406 aa8.89□□□□□ -0.99
NUP88-212ENST00000576708 ROCK2O75116 1388 aaKnown RBP8.89□□□□□ -0.99
NUP88-212ENST00000576708 CPDO75976 1380 aa8.89□□□□□ -0.99
NUP88-212ENST00000576708 SRCAPQ6ZRS2 3230 aa8.89□□□□□ -0.99
NUP88-212ENST00000576708 EVC2Q86UK5 1308 aa8.89□□□□□ -0.99
NUP88-212ENST00000576708 TBC1D2Q9BYX2 928 aa8.89□□□□□ -0.99
NUP88-212ENST00000576708 KDM4AO75164 1064 aa8.88□□□□□ -0.99
NUP88-212ENST00000576708 APLP1P51693 650 aa8.88□□□□□ -0.99
NUP88-212ENST00000576708 PDE3BQ13370 1112 aa8.88□□□□□ -0.99
NUP88-212ENST00000576708 R3HDM1Q15032 1099 aaKnown RBP8.88□□□□□ -0.99
NUP88-212ENST00000576708 FAM196AQ6ZSG2 479 aa8.88□□□□□ -0.99
NUP88-212ENST00000576708 TCP11L2Q8N4U5 519 aa8.88□□□□□ -0.99
NUP88-212ENST00000576708 POLR3EQ9NVU0 708 aa8.88□□□□□ -0.99
NUP88-212ENST00000576708 COL5A2P05997 1499 aaPredicted RBP8.88□□□□□ -0.99
NUP88-212ENST00000576708 RGPD1P0DJD0 1748 aa8.88□□□□□ -0.99
NUP88-212ENST00000576708 TNS1Q9HBL0 1735 aaKnown RBP8.88□□□□□ -0.99
NUP88-212ENST00000576708 TTC21BQ7Z4L5 1316 aa8.87□□□□□ -0.99
NUP88-212ENST00000576708 APBA3O96018 575 aa8.87□□□□□ -0.99
NUP88-212ENST00000576708 FUT2Q10981 343 aa8.87□□□□□ -0.99
NUP88-212ENST00000576708 HLA-CQ95604 372 aa8.87□□□□□ -0.99
NUP88-212ENST00000576708 CAMKK2Q96RR4 588 aa8.87□□□□□ -0.99
NUP88-212ENST00000576708 PIK3C2AO00443 1686 aa8.87□□□□□ -0.99
NUP88-212ENST00000576708 SLIT3O75094 1523 aa8.86□□□□□ -0.99
NUP88-212ENST00000576708 MOXD2PA6NHM9 499 aa8.86□□□□□ -0.99
NUP88-212ENST00000576708 NDUFV2P19404 249 aa8.86□□□□□ -0.99
NUP88-212ENST00000576708 PUS10Q3MIT2 529 aaKnown RBP8.86□□□□□ -0.99
NUP88-212ENST00000576708 KMT5BQ4FZB7 885 aa8.86□□□□□ -0.99
NUP88-212ENST00000576708 MYSM1Q5VVJ2 828 aa8.86□□□□□ -0.99
NUP88-212ENST00000576708 BRD4O60885 1362 aaPredicted RBP8.86□□□□□ -0.99
NUP88-212ENST00000576708 AATKQ6ZMQ8 1374 aa8.86□□□□□ -0.99
NUP88-212ENST00000576708 GUCA2AQ02747 115 aa8.85□□□□□ -0.99
NUP88-212ENST00000576708 TOM1L2Q6ZVM7 507 aa8.85□□□□□ -0.99
NUP88-212ENST00000576708 DISP2A7MBM2 1401 aa8.85□□□□□ -0.99
NUP88-212ENST00000576708 CRB1P82279 1406 aa8.85□□□□□ -0.99
NUP88-212ENST00000576708 COL18A1P39060 1754 aa8.84□□□□□ -0.99
NUP88-212ENST00000576708 CPSF1Q10570 1443 aaKnown RBP8.84□□□□□ -0.99
NUP88-212ENST00000576708 PTF1AQ7RTS3 328 aa8.84□□□□□ -0.99
NUP88-212ENST00000576708 ARHGEF25Q86VW2 580 aa8.84□□□□□ -0.99
NUP88-212ENST00000576708 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.84□□□□□ -0.99
NUP88-212ENST00000576708 NECTIN2Q92692 538 aa8.84□□□□□ -0.99
NUP88-212ENST00000576708 CARD11Q9BXL7 1154 aa8.84□□□□□ -0.99
NUP88-212ENST00000576708 RSPH6AQ9H0K4 717 aa8.84□□□□□ -0.99
NUP88-212ENST00000576708 THRAP3Q9Y2W1 955 aaKnown RBP8.84□□□□□ -0.99
NUP88-212ENST00000576708 KTN1Q86UP2 1357 aaKnown RBP8.84□□□□□ -0.99
NUP88-212ENST00000576708 HOXA2O43364 376 aa8.83□□□□□ -1
NUP88-212ENST00000576708 ACTN4O43707 911 aaKnown RBP8.83□□□□□ -1
NUP88-212ENST00000576708 SH3D19Q5HYK7 790 aa8.83□□□□□ -1
NUP88-212ENST00000576708 RIC3Q7Z5B4 369 aa8.83□□□□□ -1
NUP88-212ENST00000576708 NME9Q86XW9 330 aa8.83□□□□□ -1
NUP88-212ENST00000576708 PROCA1Q8NCQ7 364 aaPredicted RBP8.83□□□□□ -1
NUP88-212ENST00000576708 TMC1Q8TDI8 760 aa8.83□□□□□ -1
NUP88-212ENST00000576708 SLC12A5Q9H2X9 1139 aa8.83□□□□□ -1
NUP88-212ENST00000576708 LIMD1Q9UGP4 676 aa8.83□□□□□ -1
NUP88-212ENST00000576708 AKAP12Q02952 1782 aa8.83□□□□□ -1
NUP88-212ENST00000576708 LRP5O75197 1615 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms