RNA–Protein interactions for RNA: ENST00000576353.5

SNF8-217, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 700 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-217ENST00000576353 SNRPA1P09661 255 aaKnown RBP30.89■■■□□ 2.54
SNF8-217ENST00000576353 NEUROD2Q15784 382 aa30.89■■■□□ 2.54
SNF8-217ENST00000576353 MIS18AQ9NYP9 233 aa30.89■■■□□ 2.54
SNF8-217ENST00000576353 ZBTB1Q9Y2K1 713 aa30.89■■■□□ 2.54
SNF8-217ENST00000576353 RRP7AQ9Y3A4 280 aaKnown RBP30.89■■■□□ 2.54
SNF8-217ENST00000576353 SOS1Q07889 1333 aaPredicted RBP30.89■■■□□ 2.54
SNF8-217ENST00000576353 CCDC184Q52MB2 194 aa30.88■■■□□ 2.53
SNF8-217ENST00000576353 KLHL34Q8N239 644 aa30.88■■■□□ 2.53
SNF8-217ENST00000576353 DCAF8L1A6NGE4 600 aa30.87■■■□□ 2.53
SNF8-217ENST00000576353 CANXP27824 592 aaKnown RBP30.87■■■□□ 2.53
SNF8-217ENST00000576353 DLG5Q8TDM6 1919 aa30.86■■■□□ 2.53
SNF8-217ENST00000576353 GYS1P13807 737 aa30.86■■■□□ 2.53
SNF8-217ENST00000576353 MRS2Q9HD23 443 aa30.85■■■□□ 2.53
SNF8-217ENST00000576353 USP42Q9H9J4 1324 aaKnown RBP30.84■■■□□ 2.53
SNF8-217ENST00000576353 ZPR1O75312 459 aa30.84■■■□□ 2.53
SNF8-217ENST00000576353 MMP10P09238 476 aa30.83■■■□□ 2.53
SNF8-217ENST00000576353 BABAM1Q9NWV8 329 aa30.83■■■□□ 2.53
SNF8-217ENST00000576353 USP16Q9Y5T5 823 aa30.83■■■□□ 2.53
SNF8-217ENST00000576353 A0A087WZG4 1122 aa30.82■■■□□ 2.52
SNF8-217ENST00000576353 SRP68Q9UHB9 627 aaKnown RBP30.82■■■□□ 2.52
SNF8-217ENST00000576353 COL15A1P39059 1388 aa30.81■■■□□ 2.52
SNF8-217ENST00000576353 A1BGP04217 495 aa30.81■■■□□ 2.52
SNF8-217ENST00000576353 EIF5P55010 431 aaKnown RBP30.81■■■□□ 2.52
SNF8-217ENST00000576353 NPM2Q86SE8 214 aaKnown RBP30.81■■■□□ 2.52
SNF8-217ENST00000576353 NARFQ9UHQ1 456 aa30.81■■■□□ 2.52
SNF8-217ENST00000576353 TRIM35Q9UPQ4 493 aa30.81■■■□□ 2.52
SNF8-217ENST00000576353 IL6STP40189 918 aaPredicted RBP30.8■■■□□ 2.52
SNF8-217ENST00000576353 TSPYL4Q9UJ04 414 aa30.8■■■□□ 2.52
SNF8-217ENST00000576353 CD2APQ9Y5K6 639 aa30.8■■■□□ 2.52
SNF8-217ENST00000576353 PRAMEF22A3QJZ6 481 aa30.79■■■□□ 2.52
SNF8-217ENST00000576353 APAF1O14727 1248 aa30.79■■■□□ 2.52
SNF8-217ENST00000576353 EIF4A1P60842 406 aaKnown RBP30.79■■■□□ 2.52
SNF8-217ENST00000576353 USPL1Q5W0Q7 1092 aa30.78■■■□□ 2.52
SNF8-217ENST00000576353 FKBP8Q14318 412 aa30.77■■■□□ 2.52
SNF8-217ENST00000576353 GIGYF1O75420 1035 aaPredicted RBP30.76■■■□□ 2.51
SNF8-217ENST00000576353 ZNF330Q9Y3S2 320 aaPredicted RBP30.76■■■□□ 2.51
SNF8-217ENST00000576353 PARP3Q9Y6F1 533 aa30.76■■■□□ 2.51
SNF8-217ENST00000576353 C4AP0C0L4 1744 aa30.74■■■□□ 2.51
SNF8-217ENST00000576353 NLGN2Q8NFZ4 835 aa30.73■■■□□ 2.51
SNF8-217ENST00000576353 CHL1O00533 1208 aa30.72■■■□□ 2.51
SNF8-217ENST00000576353 KDM3BQ7LBC6 1761 aa30.71■■■□□ 2.51
SNF8-217ENST00000576353 TM4SF1P30408 202 aa30.7■■■□□ 2.51
SNF8-217ENST00000576353 CALD1Q05682 793 aaKnown RBP30.7■■■□□ 2.51
SNF8-217ENST00000576353 TBC1D2BQ9UPU7 963 aa30.7■■■□□ 2.51
SNF8-217ENST00000576353 LAS1LQ9Y4W2 734 aaKnown RBP30.7■■■□□ 2.51
SNF8-217ENST00000576353 BCL2L12Q9HB09 334 aa30.69■■■□□ 2.5
SNF8-217ENST00000576353 PIP4K2AP48426 406 aaPredicted RBP30.68■■■□□ 2.5
SNF8-217ENST00000576353 NBPF26B4DH59 902 aa30.67■■■□□ 2.5
SNF8-217ENST00000576353 NBPF10Q6P3W6 841 aaKnown RBP30.67■■■□□ 2.5
SNF8-217ENST00000576353 DZIP3Q86Y13 1208 aaKnown RBP30.67■■■□□ 2.5
SNF8-217ENST00000576353 NBPF15Q8N660 670 aa30.67■■■□□ 2.5
SNF8-217ENST00000576353 CFAP44Q96MT7 982 aa30.67■■■□□ 2.5
SNF8-217ENST00000576353 DDR1Q08345 913 aa30.66■■■□□ 2.5
SNF8-217ENST00000576353 GPR162Q16538 588 aa30.66■■■□□ 2.5
SNF8-217ENST00000576353 NFIXQ14938 502 aa30.65■■■□□ 2.5
SNF8-217ENST00000576353 POLRMTO00411 1230 aaKnown RBP30.64■■■□□ 2.5
SNF8-217ENST00000576353 CAMTA2O94983 1202 aa30.63■■■□□ 2.49
SNF8-217ENST00000576353 TGFB2P61812 414 aa30.62■■■□□ 2.49
SNF8-217ENST00000576353 PELP1Q8IZL8 1130 aaKnown RBP30.62■■■□□ 2.49
SNF8-217ENST00000576353 IFT57Q9NWB7 429 aa30.62■■■□□ 2.49
SNF8-217ENST00000576353 ERBB4Q15303 1308 aa30.62■■■□□ 2.49
SNF8-217ENST00000576353 GNAI1P63096 354 aa30.61■■■□□ 2.49
SNF8-217ENST00000576353 CCDC27Q2M243 656 aa30.61■■■□□ 2.49
SNF8-217ENST00000576353 NCBP3Q53F19 620 aaKnown RBP30.6■■■□□ 2.49
SNF8-217ENST00000576353 C10orf71Q711Q0 1435 aa30.6■■■□□ 2.49
SNF8-217ENST00000576353 ZNF853P0CG23 659 aa30.59■■■□□ 2.49
SNF8-217ENST00000576353 EIF2S2P20042 333 aaKnown RBP30.59■■■□□ 2.49
SNF8-217ENST00000576353 TBC1D9BQ66K14 1250 aa30.59■■■□□ 2.49
SNF8-217ENST00000576353 CLEC4GQ6UXB4 293 aa30.59■■■□□ 2.49
SNF8-217ENST00000576353 BICDL1Q6ZP65 573 aa30.59■■■□□ 2.49
SNF8-217ENST00000576353 FAM9BQ8IZU0 186 aa30.59■■■□□ 2.49
SNF8-217ENST00000576353 ZNF652Q9Y2D9 606 aa30.59■■■□□ 2.49
SNF8-217ENST00000576353 RGL2O15211 777 aa30.58■■■□□ 2.49
SNF8-217ENST00000576353 SERPINB2P05120 415 aa30.58■■■□□ 2.49
SNF8-217ENST00000576353 LAMB4A4D0S4 1761 aa30.57■■■□□ 2.48
SNF8-217ENST00000576353 MBIPQ9NS73 344 aa30.57■■■□□ 2.48
SNF8-217ENST00000576353 MYL6BP14649 208 aa30.56■■■□□ 2.48
SNF8-217ENST00000576353 NGEFQ8N5V2 710 aa30.56■■■□□ 2.48
SNF8-217ENST00000576353 SETDB2Q96T68 719 aa30.56■■■□□ 2.48
SNF8-217ENST00000576353 GRIN3BO60391 1043 aa30.55■■■□□ 2.48
SNF8-217ENST00000576353 HOXB7P09629 217 aa30.55■■■□□ 2.48
SNF8-217ENST00000576353 WWC1Q8IX03 1113 aa30.54■■■□□ 2.48
SNF8-217ENST00000576353 YBX3P16989 372 aaKnown RBP eCLIP30.53■■■□□ 2.482e-6■■□□□ 12.9
SNF8-217ENST00000576353 KRT24Q2M2I5 525 aa30.53■■■□□ 2.48
SNF8-217ENST00000576353 CARMIL3Q8ND23 1372 aa30.53■■■□□ 2.48
SNF8-217ENST00000576353 SENP3-EIF4A1A0A087X0R7 540 aa30.52■■■□□ 2.48
SNF8-217ENST00000576353 A0A0G2JLW4 131 aa30.52■■■□□ 2.48
SNF8-217ENST00000576353 KIF6Q6ZMV9 814 aa30.52■■■□□ 2.48
SNF8-217ENST00000576353 SCN7AQ01118 1682 aa30.52■■■□□ 2.48
SNF8-217ENST00000576353 PXDNLA1KZ92 1463 aa30.51■■■□□ 2.48
SNF8-217ENST00000576353 ERVV-1B6SEH8 477 aa30.51■■■□□ 2.47
SNF8-217ENST00000576353 DPEP1P16444 411 aa30.51■■■□□ 2.47
SNF8-217ENST00000576353 PDIA6Q15084 440 aa30.51■■■□□ 2.47
SNF8-217ENST00000576353 DUSP27Q5VZP5 1158 aa30.5■■■□□ 2.47
SNF8-217ENST00000576353 KIF13BQ9NQT8 1826 aa30.5■■■□□ 2.47
SNF8-217ENST00000576353 NECTIN2Q92692 538 aa30.49■■■□□ 2.47
SNF8-217ENST00000576353 MAP3K15Q6ZN16 1313 aa30.48■■■□□ 2.47
SNF8-217ENST00000576353 HDGFL1Q5TGJ6 251 aa30.48■■■□□ 2.47
SNF8-217ENST00000576353 TTLL7Q6ZT98 887 aa30.48■■■□□ 2.47
SNF8-217ENST00000576353 HLFQ16534 295 aa30.47■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 500.4 ms